EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000022402 (Gene tree)
Gene ID: -
Gene Symbol: SBDS
Alias: CGI-97|FLJ10917|SDS|SWDS
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 8266 bases
Position: chrPPEB01001815.1:149721-157986
Accession: 19440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000031174	SBDS	PF01172.18	1.7e-21	1	1
ENSGAGP00000031174	SBDS_C	PF09377.10	1.7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000035353	SBDS-201	2285	-	ENSGAGP00000031174	214 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000022402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000022402's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000022402	SBDS	100	89.720	ENSG00000126524	SBDS	86	89.720	Homo_sapiens
ENSGAGG00000022402	SBDS	99	86.385	ENSAPOG00000014285	sbds	86	86.385	Acanthochromis_polyacanthus
ENSGAGG00000022402	SBDS	100	89.720	ENSAMEG00000018167	SBDS	86	89.720	Ailuropoda_melanoleuca
ENSGAGG00000022402	SBDS	99	86.111	ENSACIG00000007308	sbds	86	86.111	Amphilophus_citrinellus
ENSGAGG00000022402	SBDS	99	87.324	ENSAOCG00000016770	sbds	86	87.324	Amphiprion_ocellaris
ENSGAGG00000022402	SBDS	99	86.854	ENSAPEG00000015897	sbds	86	86.854	Amphiprion_percula
ENSGAGG00000022402	SBDS	99	87.324	ENSATEG00000006901	sbds	86	87.324	Anabas_testudineus
ENSGAGG00000022402	SBDS	97	90.338	ENSANAG00000037501	-	100	90.338	Aotus_nancymaae
ENSGAGG00000022402	SBDS	87	86.022	ENSANAG00000024342	-	81	86.022	Aotus_nancymaae
ENSGAGG00000022402	SBDS	99	87.324	ENSACLG00000018750	sbds	86	87.324	Astatotilapia_calliptera
ENSGAGG00000022402	SBDS	100	87.850	ENSAMXG00000005361	sbds	86	87.850	Astyanax_mexicanus
ENSGAGG00000022402	SBDS	100	90.187	ENSBTAG00000004051	SBDS	86	90.187	Bos_taurus
ENSGAGG00000022402	SBDS	98	55.450	WBGene00021063	sbds-1	83	55.450	Caenorhabditis_elegans
ENSGAGG00000022402	SBDS	100	89.720	ENSCJAG00000041007	SBDS	86	89.720	Callithrix_jacchus
ENSGAGG00000022402	SBDS	100	87.500	ENSCAFG00000010797	SBDS	86	87.500	Canis_familiaris
ENSGAGG00000022402	SBDS	100	89.720	ENSCAFG00020005357	SBDS	86	89.720	Canis_lupus_dingo
ENSGAGG00000022402	SBDS	100	90.187	ENSCHIG00000026854	SBDS	86	90.187	Capra_hircus
ENSGAGG00000022402	SBDS	100	89.720	ENSTSYG00000033822	SBDS	86	89.720	Carlito_syrichta
ENSGAGG00000022402	SBDS	77	92.073	ENSCAPG00000006634	SBDS	100	92.073	Cavia_aperea
ENSGAGG00000022402	SBDS	100	90.187	ENSCPOG00000036143	SBDS	86	90.187	Cavia_porcellus
ENSGAGG00000022402	SBDS	100	89.252	ENSCCAG00000020671	SBDS	86	89.252	Cebus_capucinus
ENSGAGG00000022402	SBDS	100	89.720	ENSCATG00000039026	SBDS	86	89.720	Cercocebus_atys
ENSGAGG00000022402	SBDS	99	63.551	ENSCLAG00000002113	-	84	63.256	Chinchilla_lanigera
ENSGAGG00000022402	SBDS	100	90.654	ENSCLAG00000005721	-	86	90.654	Chinchilla_lanigera
ENSGAGG00000022402	SBDS	100	89.720	ENSCSAG00000018275	SBDS	86	89.720	Chlorocebus_sabaeus
ENSGAGG00000022402	SBDS	100	84.112	ENSCHOG00000003795	SBDS	86	84.112	Choloepus_hoffmanni
ENSGAGG00000022402	SBDS	100	98.598	ENSCPBG00000014893	SBDS	86	98.598	Chrysemys_picta_bellii
ENSGAGG00000022402	SBDS	99	63.084	ENSCSAVG00000011811	-	86	63.084	Ciona_savignyi
ENSGAGG00000022402	SBDS	100	89.252	ENSCANG00000032368	SBDS	86	89.252	Colobus_angolensis_palliatus
ENSGAGG00000022402	SBDS	77	90.244	ENSCGRG00001019886	Sbds	100	90.244	Cricetulus_griseus_chok1gshd
ENSGAGG00000022402	SBDS	97	89.372	ENSCGRG00000009211	Sbds	100	89.372	Cricetulus_griseus_crigri
ENSGAGG00000022402	SBDS	99	85.446	ENSCSEG00000005798	sbds	86	85.446	Cynoglossus_semilaevis
ENSGAGG00000022402	SBDS	99	84.038	ENSCVAG00000001053	sbds	86	84.038	Cyprinodon_variegatus
ENSGAGG00000022402	SBDS	100	87.383	ENSDARG00000027803	sbds	86	87.383	Danio_rerio
ENSGAGG00000022402	SBDS	100	90.187	ENSDNOG00000041174	SBDS	86	90.187	Dasypus_novemcinctus
ENSGAGG00000022402	SBDS	100	89.252	ENSDORG00000026218	Sbds	86	89.252	Dipodomys_ordii
ENSGAGG00000022402	SBDS	90	56.701	FBgn0035714	CG8549	85	57.209	Drosophila_melanogaster
ENSGAGG00000022402	SBDS	97	65.217	ENSEBUG00000015780	sbds	92	65.217	Eptatretus_burgeri
ENSGAGG00000022402	SBDS	100	89.720	ENSEASG00005008821	SBDS	86	89.720	Equus_asinus_asinus
ENSGAGG00000022402	SBDS	100	89.720	ENSECAG00000008202	SBDS	86	89.720	Equus_caballus
ENSGAGG00000022402	SBDS	57	88.525	ENSEEUG00000004768	SBDS	59	88.525	Erinaceus_europaeus
ENSGAGG00000022402	SBDS	100	84.579	ENSELUG00000008382	sbds	86	84.579	Esox_lucius
ENSGAGG00000022402	SBDS	100	89.252	ENSFCAG00000022142	SBDS	86	89.252	Felis_catus
ENSGAGG00000022402	SBDS	100	95.327	ENSFALG00000013808	SBDS	86	95.327	Ficedula_albicollis
ENSGAGG00000022402	SBDS	100	90.187	ENSFDAG00000018947	-	86	90.187	Fukomys_damarensis
ENSGAGG00000022402	SBDS	99	82.629	ENSFHEG00000000708	sbds	85	83.412	Fundulus_heteroclitus
ENSGAGG00000022402	SBDS	100	84.112	ENSGMOG00000018356	sbds	85	84.112	Gadus_morhua
ENSGAGG00000022402	SBDS	100	93.925	ENSGALG00000027989	SBDS	86	93.925	Gallus_gallus
ENSGAGG00000022402	SBDS	99	83.568	ENSGAFG00000014204	sbds	93	83.568	Gambusia_affinis
ENSGAGG00000022402	SBDS	99	84.038	ENSGACG00000012697	sbds	86	84.038	Gasterosteus_aculeatus
ENSGAGG00000022402	SBDS	100	68.692	ENSGGOG00000040023	-	80	68.692	Gorilla_gorilla
ENSGAGG00000022402	SBDS	99	87.324	ENSHBUG00000002660	sbds	86	87.324	Haplochromis_burtoni
ENSGAGG00000022402	SBDS	100	88.318	ENSHGLG00000009671	SBDS	86	88.318	Heterocephalus_glaber_female
ENSGAGG00000022402	SBDS	100	88.318	ENSHGLG00100011332	SBDS	86	88.318	Heterocephalus_glaber_male
ENSGAGG00000022402	SBDS	99	82.160	ENSHCOG00000018606	sbds	86	82.160	Hippocampus_comes
ENSGAGG00000022402	SBDS	100	88.318	ENSIPUG00000006536	sbds	86	88.318	Ictalurus_punctatus
ENSGAGG00000022402	SBDS	96	60.680	ENSJJAG00000003934	-	80	60.190	Jaculus_jaculus
ENSGAGG00000022402	SBDS	100	87.383	ENSJJAG00000012033	-	86	87.383	Jaculus_jaculus
ENSGAGG00000022402	SBDS	99	87.324	ENSKMAG00000018542	sbds	86	87.324	Kryptolebias_marmoratus
ENSGAGG00000022402	SBDS	99	84.507	ENSLBEG00000016687	sbds	86	84.507	Labrus_bergylta
ENSGAGG00000022402	SBDS	100	72.936	ENSLACG00000018916	SBDS	85	72.936	Latimeria_chalumnae
ENSGAGG00000022402	SBDS	100	92.991	ENSLOCG00000004073	sbds	86	92.991	Lepisosteus_oculatus
ENSGAGG00000022402	SBDS	100	88.785	ENSLAFG00000008763	SBDS	86	88.785	Loxodonta_africana
ENSGAGG00000022402	SBDS	100	89.720	ENSMFAG00000032620	SBDS	86	89.720	Macaca_fascicularis
ENSGAGG00000022402	SBDS	100	89.720	ENSMMUG00000045653	SBDS	86	89.720	Macaca_mulatta
ENSGAGG00000022402	SBDS	100	89.720	ENSMNEG00000031523	SBDS	86	89.720	Macaca_nemestrina
ENSGAGG00000022402	SBDS	100	65.596	ENSMLEG00000036826	SBDS	83	65.596	Mandrillus_leucophaeus
ENSGAGG00000022402	SBDS	99	85.446	ENSMAMG00000016062	sbds	86	85.446	Mastacembelus_armatus
ENSGAGG00000022402	SBDS	99	87.324	ENSMZEG00005024385	sbds	86	87.324	Maylandia_zebra
ENSGAGG00000022402	SBDS	100	93.925	ENSMGAG00000002119	SBDS	86	93.925	Meleagris_gallopavo
ENSGAGG00000022402	SBDS	99	67.136	ENSMAUG00000022214	-	83	67.136	Mesocricetus_auratus
ENSGAGG00000022402	SBDS	100	90.187	ENSMICG00000014366	SBDS	86	90.187	Microcebus_murinus
ENSGAGG00000022402	SBDS	100	89.252	ENSMOCG00000011739	Sbds	86	89.252	Microtus_ochrogaster
ENSGAGG00000022402	SBDS	99	75.234	ENSMMOG00000005061	sbds	86	74.766	Mola_mola
ENSGAGG00000022402	SBDS	100	91.589	ENSMODG00000006644	SBDS	86	91.589	Monodelphis_domestica
ENSGAGG00000022402	SBDS	99	86.385	ENSMALG00000010219	sbds	86	86.385	Monopterus_albus
ENSGAGG00000022402	SBDS	100	89.720	MGP_CAROLIEiJ_G0027800	Sbds	97	88.623	Mus_caroli
ENSGAGG00000022402	SBDS	100	89.252	ENSMUSG00000025337	Sbds	96	89.157	Mus_musculus
ENSGAGG00000022402	SBDS	100	89.720	MGP_PahariEiJ_G0024384	Sbds	96	89.157	Mus_pahari
ENSGAGG00000022402	SBDS	100	89.252	MGP_SPRETEiJ_G0028798	Sbds	96	89.157	Mus_spretus
ENSGAGG00000022402	SBDS	79	87.500	ENSMPUG00000016192	SBDS	97	87.500	Mustela_putorius_furo
ENSGAGG00000022402	SBDS	85	89.011	ENSMLUG00000013575	SBDS	100	89.011	Myotis_lucifugus
ENSGAGG00000022402	SBDS	100	89.252	ENSNGAG00000012093	Sbds	86	89.252	Nannospalax_galili
ENSGAGG00000022402	SBDS	99	87.324	ENSNBRG00000017027	sbds	86	87.324	Neolamprologus_brichardi
ENSGAGG00000022402	SBDS	100	89.720	ENSNLEG00000013288	SBDS	86	89.720	Nomascus_leucogenys
ENSGAGG00000022402	SBDS	100	87.383	ENSOPRG00000008721	SBDS	86	87.383	Ochotona_princeps
ENSGAGG00000022402	SBDS	90	73.575	ENSODEG00000000137	-	73	77.320	Octodon_degus
ENSGAGG00000022402	SBDS	99	70.423	ENSODEG00000001116	-	84	70.423	Octodon_degus
ENSGAGG00000022402	SBDS	100	82.710	ENSODEG00000019253	-	72	82.710	Octodon_degus
ENSGAGG00000022402	SBDS	99	86.385	ENSONIG00000005874	sbds	86	86.385	Oreochromis_niloticus
ENSGAGG00000022402	SBDS	97	87.440	ENSOANG00000007674	-	100	87.440	Ornithorhynchus_anatinus
ENSGAGG00000022402	SBDS	100	88.785	ENSOCUG00000003170	SBDS	86	88.785	Oryctolagus_cuniculus
ENSGAGG00000022402	SBDS	99	83.099	ENSORLG00000023489	sbds	86	83.099	Oryzias_latipes
ENSGAGG00000022402	SBDS	99	82.629	ENSORLG00020019282	sbds	86	82.629	Oryzias_latipes_hni
ENSGAGG00000022402	SBDS	99	82.629	ENSORLG00015008005	sbds	86	82.629	Oryzias_latipes_hsok
ENSGAGG00000022402	SBDS	99	83.568	ENSOMEG00000022747	sbds	86	83.568	Oryzias_melastigma
ENSGAGG00000022402	SBDS	100	90.187	ENSOGAG00000009011	-	86	90.187	Otolemur_garnettii
ENSGAGG00000022402	SBDS	100	82.243	ENSOGAG00000015036	-	86	82.243	Otolemur_garnettii
ENSGAGG00000022402	SBDS	100	90.187	ENSOARG00000010609	SBDS	86	90.187	Ovis_aries
ENSGAGG00000022402	SBDS	100	88.785	ENSPPAG00000043889	-	86	88.785	Pan_paniscus
ENSGAGG00000022402	SBDS	100	89.252	ENSPPRG00000002307	SBDS	86	89.252	Panthera_pardus
ENSGAGG00000022402	SBDS	100	89.252	ENSPTIG00000021308	SBDS	86	89.252	Panthera_tigris_altaica
ENSGAGG00000022402	SBDS	100	89.720	ENSPTRG00000019254	SBDS	86	89.720	Pan_troglodytes
ENSGAGG00000022402	SBDS	90	80.829	ENSPTRG00000047744	-	83	80.829	Pan_troglodytes
ENSGAGG00000022402	SBDS	90	80.829	ENSPTRG00000050835	-	83	80.829	Pan_troglodytes
ENSGAGG00000022402	SBDS	85	86.188	ENSPTRG00000048174	-	80	86.188	Pan_troglodytes
ENSGAGG00000022402	SBDS	100	89.252	ENSPANG00000004078	SBDS	86	89.252	Papio_anubis
ENSGAGG00000022402	SBDS	100	89.720	ENSPKIG00000006489	sbds	86	89.720	Paramormyrops_kingsleyae
ENSGAGG00000022402	SBDS	97	96.635	ENSPSIG00000014603	SBDS	100	96.635	Pelodiscus_sinensis
ENSGAGG00000022402	SBDS	99	84.977	ENSPMGG00000004246	sbds	86	84.977	Periophthalmus_magnuspinnatus
ENSGAGG00000022402	SBDS	100	89.252	ENSPEMG00000008728	Sbds	86	89.252	Peromyscus_maniculatus_bairdii
ENSGAGG00000022402	SBDS	100	90.654	ENSPCIG00000029718	SBDS	86	90.654	Phascolarctos_cinereus
ENSGAGG00000022402	SBDS	99	84.038	ENSPFOG00000015837	sbds	86	84.038	Poecilia_formosa
ENSGAGG00000022402	SBDS	99	84.507	ENSPLAG00000003641	sbds	86	84.507	Poecilia_latipinna
ENSGAGG00000022402	SBDS	99	84.038	ENSPMEG00000019483	sbds	86	84.038	Poecilia_mexicana
ENSGAGG00000022402	SBDS	99	84.038	ENSPREG00000018758	sbds	86	84.038	Poecilia_reticulata
ENSGAGG00000022402	SBDS	100	89.720	ENSPPYG00000017513	SBDS	86	89.720	Pongo_abelii
ENSGAGG00000022402	SBDS	100	89.720	ENSPCOG00000021098	SBDS	86	89.720	Propithecus_coquereli
ENSGAGG00000022402	SBDS	100	89.252	ENSPVAG00000009369	SBDS	86	89.252	Pteropus_vampyrus
ENSGAGG00000022402	SBDS	99	86.854	ENSPNYG00000022403	sbds	86	86.854	Pundamilia_nyererei
ENSGAGG00000022402	SBDS	100	87.850	ENSPNAG00000001120	sbds	86	87.850	Pygocentrus_nattereri
ENSGAGG00000022402	SBDS	100	89.252	ENSRNOG00000000888	Sbds	86	89.252	Rattus_norvegicus
ENSGAGG00000022402	SBDS	100	89.720	ENSRBIG00000035557	SBDS	93	89.720	Rhinopithecus_bieti
ENSGAGG00000022402	SBDS	100	89.720	ENSRROG00000040842	-	93	89.720	Rhinopithecus_roxellana
ENSGAGG00000022402	SBDS	100	71.495	ENSRROG00000041986	-	84	68.692	Rhinopithecus_roxellana
ENSGAGG00000022402	SBDS	94	39.904	YLR022C	-	56	45.324	Saccharomyces_cerevisiae
ENSGAGG00000022402	SBDS	100	88.785	ENSSBOG00000022460	SBDS	92	88.785	Saimiri_boliviensis_boliviensis
ENSGAGG00000022402	SBDS	100	78.505	ENSSHAG00000010263	SBDS	85	78.505	Sarcophilus_harrisii
ENSGAGG00000022402	SBDS	100	91.589	ENSSFOG00015001108	sbds	86	91.589	Scleropages_formosus
ENSGAGG00000022402	SBDS	99	86.385	ENSSMAG00000020506	sbds	86	86.385	Scophthalmus_maximus
ENSGAGG00000022402	SBDS	99	85.446	ENSSDUG00000001528	sbds	86	85.446	Seriola_dumerili
ENSGAGG00000022402	SBDS	99	85.915	ENSSLDG00000003659	sbds	86	85.915	Seriola_lalandi_dorsalis
ENSGAGG00000022402	SBDS	55	89.744	ENSSARG00000013132	-	76	89.744	Sorex_araneus
ENSGAGG00000022402	SBDS	68	85.714	ENSSARG00000001899	-	58	85.714	Sorex_araneus
ENSGAGG00000022402	SBDS	100	92.523	ENSSPUG00000002699	SBDS	86	92.523	Sphenodon_punctatus
ENSGAGG00000022402	SBDS	99	86.385	ENSSPAG00000016419	sbds	85	78.505	Stegastes_partitus
ENSGAGG00000022402	SBDS	100	90.187	ENSSSCG00000007732	SBDS	86	90.187	Sus_scrofa
ENSGAGG00000022402	SBDS	77	95.122	ENSTGUG00000003426	SBDS	99	95.122	Taeniopygia_guttata
ENSGAGG00000022402	SBDS	99	86.385	ENSTRUG00000021443	sbds	86	86.385	Takifugu_rubripes
ENSGAGG00000022402	SBDS	99	84.977	ENSTNIG00000019000	sbds	86	84.977	Tetraodon_nigroviridis
ENSGAGG00000022402	SBDS	80	72.674	ENSTBEG00000001178	SBDS	82	72.674	Tupaia_belangeri
ENSGAGG00000022402	SBDS	100	67.290	ENSTTRG00000003921	SBDS	86	67.290	Tursiops_truncatus
ENSGAGG00000022402	SBDS	100	89.720	ENSUAMG00000001326	SBDS	86	89.720	Ursus_americanus
ENSGAGG00000022402	SBDS	100	89.720	ENSUMAG00000015353	SBDS	86	89.720	Ursus_maritimus
ENSGAGG00000022402	SBDS	100	89.720	ENSVVUG00000016478	SBDS	86	89.720	Vulpes_vulpes
ENSGAGG00000022402	SBDS	100	87.850	ENSXETG00000010093	sbds	86	87.850	Xenopus_tropicalis
ENSGAGG00000022402	SBDS	99	73.709	ENSXCOG00000010639	sbds	84	73.709	Xiphophorus_couchianus
ENSGAGG00000022402	SBDS	99	84.977	ENSXMAG00000006065	sbds	86	84.977	Xiphophorus_maculatus