EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000022646 (Gene tree)
Gene ID: -
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 109742 bases
Position: chrPPEB01002283.1:44037-153778
Accession: 7877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000031536	Not1	PF04054.15	1e-152	1	1
ENSGAGP00000031533	Not1	PF04054.15	1e-152	1	1
ENSGAGP00000031530	Not1	PF04054.15	1.1e-152	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000035764	CNOT1-203	7341	-	ENSGAGP00000031536	2255 (aa)	-	-
ENSGAGT00000035760	CNOT1-202	7584	-	ENSGAGP00000031533	2336 (aa)	-	-
ENSGAGT00000035757	CNOT1-201	7707	-	ENSGAGP00000031530	2377 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000022646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000022646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000022646	CNOT1	100	97.897	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSGAGG00000022646	CNOT1	97	96.774	ENSAPOG00000005042	cnot1	100	96.774	Acanthochromis_polyacanthus
ENSGAGG00000022646	CNOT1	100	97.644	ENSAMEG00000017298	CNOT1	100	97.644	Ailuropoda_melanoleuca
ENSGAGG00000022646	CNOT1	90	91.105	ENSACIG00000016003	cnot1	100	90.261	Amphilophus_citrinellus
ENSGAGG00000022646	CNOT1	100	92.616	ENSAPEG00000022342	cnot1	100	90.512	Amphiprion_percula
ENSGAGG00000022646	CNOT1	100	87.626	ENSATEG00000012892	cnot1	100	87.914	Anabas_testudineus
ENSGAGG00000022646	CNOT1	100	99.065	ENSAPLG00000007162	CNOT1	100	98.740	Anas_platyrhynchos
ENSGAGG00000022646	CNOT1	91	97.450	ENSACAG00000001602	CNOT1	98	97.450	Anolis_carolinensis
ENSGAGG00000022646	CNOT1	100	96.167	ENSANAG00000038198	CNOT1	100	95.017	Aotus_nancymaae
ENSGAGG00000022646	CNOT1	97	96.914	ENSACLG00000014234	cnot1	100	96.914	Astatotilapia_calliptera
ENSGAGG00000022646	CNOT1	100	92.308	ENSAMXG00000013170	cnot1	100	91.505	Astyanax_mexicanus
ENSGAGG00000022646	CNOT1	100	97.897	ENSBTAG00000020782	CNOT1	100	98.603	Bos_taurus
ENSGAGG00000022646	CNOT1	82	40.172	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSGAGG00000022646	CNOT1	100	97.854	ENSCJAG00000011318	CNOT1	100	97.854	Callithrix_jacchus
ENSGAGG00000022646	CNOT1	100	97.565	ENSCAFG00000008426	CNOT1	100	97.565	Canis_familiaris
ENSGAGG00000022646	CNOT1	100	96.815	ENSCAFG00020010156	CNOT1	100	97.064	Canis_lupus_dingo
ENSGAGG00000022646	CNOT1	100	97.897	ENSCHIG00000010452	CNOT1	100	97.897	Capra_hircus
ENSGAGG00000022646	CNOT1	100	98.023	ENSTSYG00000006888	CNOT1	100	98.023	Carlito_syrichta
ENSGAGG00000022646	CNOT1	100	93.956	ENSCPOG00000013026	CNOT1	100	93.437	Cavia_porcellus
ENSGAGG00000022646	CNOT1	100	96.298	ENSCCAG00000026333	CNOT1	100	96.298	Cebus_capucinus
ENSGAGG00000022646	CNOT1	100	97.939	ENSCATG00000032625	CNOT1	100	97.939	Cercocebus_atys
ENSGAGG00000022646	CNOT1	100	97.812	ENSCLAG00000006289	CNOT1	100	97.812	Chinchilla_lanigera
ENSGAGG00000022646	CNOT1	100	97.939	ENSCSAG00000004731	CNOT1	100	97.939	Chlorocebus_sabaeus
ENSGAGG00000022646	CNOT1	82	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSGAGG00000022646	CNOT1	98	99.712	ENSCPBG00000026222	CNOT1	99	99.028	Chrysemys_picta_bellii
ENSGAGG00000022646	CNOT1	100	64.057	ENSCING00000009149	-	100	58.904	Ciona_intestinalis
ENSGAGG00000022646	CNOT1	89	68.289	ENSCSAVG00000002414	-	95	68.052	Ciona_savignyi
ENSGAGG00000022646	CNOT1	100	95.865	ENSCANG00000040534	CNOT1	100	95.865	Colobus_angolensis_palliatus
ENSGAGG00000022646	CNOT1	100	97.476	ENSCGRG00001016365	Cnot1	100	97.476	Cricetulus_griseus_chok1gshd
ENSGAGG00000022646	CNOT1	100	97.476	ENSCGRG00000001714	Cnot1	100	97.476	Cricetulus_griseus_crigri
ENSGAGG00000022646	CNOT1	100	86.073	ENSCVAG00000018930	cnot1	100	83.271	Cyprinodon_variegatus
ENSGAGG00000022646	CNOT1	100	91.052	ENSDARG00000004174	cnot1	100	90.151	Danio_rerio
ENSGAGG00000022646	CNOT1	100	96.405	ENSDNOG00000013250	CNOT1	100	95.374	Dasypus_novemcinctus
ENSGAGG00000022646	CNOT1	99	50.750	FBgn0085436	Not1	99	48.564	Drosophila_melanogaster
ENSGAGG00000022646	CNOT1	82	100.000	ENSETEG00000012806	CNOT1	84	97.139	Echinops_telfairi
ENSGAGG00000022646	CNOT1	86	76.682	ENSEBUG00000011534	cnot1	95	76.682	Eptatretus_burgeri
ENSGAGG00000022646	CNOT1	97	98.611	ENSEASG00005005819	CNOT1	100	98.611	Equus_asinus_asinus
ENSGAGG00000022646	CNOT1	100	97.939	ENSECAG00000009889	CNOT1	100	99.579	Equus_caballus
ENSGAGG00000022646	CNOT1	90	97.729	ENSEEUG00000006015	CNOT1	90	97.729	Erinaceus_europaeus
ENSGAGG00000022646	CNOT1	100	90.947	ENSELUG00000014085	cnot1	100	89.491	Esox_lucius
ENSGAGG00000022646	CNOT1	100	97.651	ENSFCAG00000025155	CNOT1	100	97.651	Felis_catus
ENSGAGG00000022646	CNOT1	100	98.921	ENSFALG00000007285	CNOT1	100	98.738	Ficedula_albicollis
ENSGAGG00000022646	CNOT1	100	97.812	ENSFDAG00000013399	CNOT1	100	97.812	Fukomys_damarensis
ENSGAGG00000022646	CNOT1	100	91.679	ENSFHEG00000020574	cnot1	100	90.256	Fundulus_heteroclitus
ENSGAGG00000022646	CNOT1	90	90.716	ENSGMOG00000012864	cnot1	100	89.542	Gadus_morhua
ENSGAGG00000022646	CNOT1	100	99.065	ENSGALG00000002301	CNOT1	100	98.822	Gallus_gallus
ENSGAGG00000022646	CNOT1	100	91.254	ENSGAFG00000015005	cnot1	100	88.917	Gambusia_affinis
ENSGAGG00000022646	CNOT1	91	89.963	ENSGACG00000002606	cnot1	100	95.388	Gasterosteus_aculeatus
ENSGAGG00000022646	CNOT1	100	97.854	ENSGGOG00000009547	CNOT1	100	97.854	Gorilla_gorilla
ENSGAGG00000022646	CNOT1	97	96.914	ENSHBUG00000001729	cnot1	100	96.914	Haplochromis_burtoni
ENSGAGG00000022646	CNOT1	100	97.728	ENSHGLG00000014322	CNOT1	100	97.728	Heterocephalus_glaber_female
ENSGAGG00000022646	CNOT1	100	90.534	ENSHCOG00000006501	cnot1	100	89.674	Hippocampus_comes
ENSGAGG00000022646	CNOT1	100	90.623	ENSIPUG00000011915	cnot1	100	89.388	Ictalurus_punctatus
ENSGAGG00000022646	CNOT1	100	97.728	ENSSTOG00000005490	CNOT1	100	97.728	Ictidomys_tridecemlineatus
ENSGAGG00000022646	CNOT1	100	97.265	ENSJJAG00000000633	Cnot1	100	97.265	Jaculus_jaculus
ENSGAGG00000022646	CNOT1	100	91.512	ENSKMAG00000006149	cnot1	100	90.167	Kryptolebias_marmoratus
ENSGAGG00000022646	CNOT1	95	96.607	ENSLBEG00000004740	cnot1	100	96.607	Labrus_bergylta
ENSGAGG00000022646	CNOT1	100	95.971	ENSLACG00000010869	CNOT1	100	94.615	Latimeria_chalumnae
ENSGAGG00000022646	CNOT1	100	93.205	ENSLOCG00000006324	cnot1	100	92.495	Lepisosteus_oculatus
ENSGAGG00000022646	CNOT1	100	97.688	ENSLAFG00000000098	CNOT1	100	97.688	Loxodonta_africana
ENSGAGG00000022646	CNOT1	100	97.686	ENSMFAG00000035888	CNOT1	100	97.686	Macaca_fascicularis
ENSGAGG00000022646	CNOT1	100	97.897	ENSMMUG00000014625	CNOT1	100	97.897	Macaca_mulatta
ENSGAGG00000022646	CNOT1	100	95.594	ENSMNEG00000031820	CNOT1	100	97.899	Macaca_nemestrina
ENSGAGG00000022646	CNOT1	100	96.508	ENSMLEG00000040933	CNOT1	100	96.508	Mandrillus_leucophaeus
ENSGAGG00000022646	CNOT1	100	91.619	ENSMAMG00000016524	cnot1	100	89.253	Mastacembelus_armatus
ENSGAGG00000022646	CNOT1	97	96.914	ENSMZEG00005016210	cnot1	100	96.914	Maylandia_zebra
ENSGAGG00000022646	CNOT1	100	99.065	ENSMGAG00000001908	CNOT1	100	98.570	Meleagris_gallopavo
ENSGAGG00000022646	CNOT1	100	97.770	ENSMICG00000007071	CNOT1	100	97.728	Microcebus_murinus
ENSGAGG00000022646	CNOT1	100	97.518	ENSMOCG00000017969	Cnot1	100	97.518	Microtus_ochrogaster
ENSGAGG00000022646	CNOT1	97	93.548	ENSMMOG00000019134	cnot1	100	93.548	Mola_mola
ENSGAGG00000022646	CNOT1	100	97.771	ENSMODG00000014199	CNOT1	100	97.771	Monodelphis_domestica
ENSGAGG00000022646	CNOT1	100	92.324	ENSMALG00000008645	cnot1	100	90.424	Monopterus_albus
ENSGAGG00000022646	CNOT1	95	99.048	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	Mus_caroli
ENSGAGG00000022646	CNOT1	100	97.560	ENSMUSG00000036550	Cnot1	100	97.560	Mus_musculus
ENSGAGG00000022646	CNOT1	100	97.518	MGP_PahariEiJ_G0023028	Cnot1	100	97.518	Mus_pahari
ENSGAGG00000022646	CNOT1	100	97.560	MGP_SPRETEiJ_G0032549	Cnot1	100	97.560	Mus_spretus
ENSGAGG00000022646	CNOT1	100	97.939	ENSMPUG00000004830	CNOT1	100	97.939	Mustela_putorius_furo
ENSGAGG00000022646	CNOT1	100	97.482	ENSMLUG00000003728	CNOT1	100	97.350	Myotis_lucifugus
ENSGAGG00000022646	CNOT1	100	97.812	ENSNGAG00000018628	Cnot1	100	97.812	Nannospalax_galili
ENSGAGG00000022646	CNOT1	94	96.914	ENSNBRG00000019358	cnot1	100	96.914	Neolamprologus_brichardi
ENSGAGG00000022646	CNOT1	100	97.897	ENSNLEG00000003566	CNOT1	100	97.897	Nomascus_leucogenys
ENSGAGG00000022646	CNOT1	89	97.987	ENSMEUG00000006145	CNOT1	88	97.987	Notamacropus_eugenii
ENSGAGG00000022646	CNOT1	87	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSGAGG00000022646	CNOT1	100	97.770	ENSODEG00000016337	CNOT1	100	97.770	Octodon_degus
ENSGAGG00000022646	CNOT1	100	92.148	ENSONIG00000007358	cnot1	100	90.494	Oreochromis_niloticus
ENSGAGG00000022646	CNOT1	91	97.723	ENSOANG00000012109	CNOT1	100	98.073	Ornithorhynchus_anatinus
ENSGAGG00000022646	CNOT1	100	97.854	ENSOCUG00000006911	CNOT1	100	97.854	Oryctolagus_cuniculus
ENSGAGG00000022646	CNOT1	100	91.392	ENSORLG00000013734	cnot1	100	90.440	Oryzias_latipes
ENSGAGG00000022646	CNOT1	100	88.702	ENSORLG00020017012	cnot1	100	88.744	Oryzias_latipes_hni
ENSGAGG00000022646	CNOT1	100	88.618	ENSORLG00015007091	cnot1	100	88.492	Oryzias_latipes_hsok
ENSGAGG00000022646	CNOT1	100	88.290	ENSOMEG00000015124	cnot1	100	88.292	Oryzias_melastigma
ENSGAGG00000022646	CNOT1	100	97.770	ENSOGAG00000000543	CNOT1	100	97.770	Otolemur_garnettii
ENSGAGG00000022646	CNOT1	100	97.897	ENSOARG00000001567	CNOT1	100	97.897	Ovis_aries
ENSGAGG00000022646	CNOT1	100	97.897	ENSPPAG00000022013	CNOT1	100	97.897	Pan_paniscus
ENSGAGG00000022646	CNOT1	100	97.939	ENSPPRG00000004867	CNOT1	100	97.939	Panthera_pardus
ENSGAGG00000022646	CNOT1	100	97.939	ENSPTIG00000012589	CNOT1	100	97.939	Panthera_tigris_altaica
ENSGAGG00000022646	CNOT1	100	97.609	ENSPTRG00000008183	CNOT1	100	97.609	Pan_troglodytes
ENSGAGG00000022646	CNOT1	100	94.468	ENSPANG00000020901	CNOT1	100	94.384	Papio_anubis
ENSGAGG00000022646	CNOT1	100	92.308	ENSPKIG00000023538	CNOT1	100	91.737	Paramormyrops_kingsleyae
ENSGAGG00000022646	CNOT1	97	92.978	ENSPKIG00000002914	CNOT1	99	92.978	Paramormyrops_kingsleyae
ENSGAGG00000022646	CNOT1	100	99.537	ENSPSIG00000005499	CNOT1	100	99.537	Pelodiscus_sinensis
ENSGAGG00000022646	CNOT1	100	81.707	ENSPMAG00000009381	cnot1	100	80.864	Petromyzon_marinus
ENSGAGG00000022646	CNOT1	100	96.455	ENSPCIG00000007343	CNOT1	100	98.472	Phascolarctos_cinereus
ENSGAGG00000022646	CNOT1	99	90.922	ENSPFOG00000003497	cnot1	100	89.641	Poecilia_formosa
ENSGAGG00000022646	CNOT1	95	96.208	ENSPLAG00000014018	cnot1	100	96.208	Poecilia_latipinna
ENSGAGG00000022646	CNOT1	95	96.208	ENSPMEG00000005868	cnot1	100	96.208	Poecilia_mexicana
ENSGAGG00000022646	CNOT1	95	96.208	ENSPREG00000018793	cnot1	100	96.208	Poecilia_reticulata
ENSGAGG00000022646	CNOT1	100	97.854	ENSPPYG00000007410	CNOT1	100	97.854	Pongo_abelii
ENSGAGG00000022646	CNOT1	90	95.830	ENSPCAG00000003241	CNOT1	90	95.830	Procavia_capensis
ENSGAGG00000022646	CNOT1	100	97.483	ENSPCOG00000027139	CNOT1	100	97.483	Propithecus_coquereli
ENSGAGG00000022646	CNOT1	100	96.054	ENSPVAG00000004243	CNOT1	100	95.288	Pteropus_vampyrus
ENSGAGG00000022646	CNOT1	97	96.914	ENSPNYG00000012919	cnot1	100	96.914	Pundamilia_nyererei
ENSGAGG00000022646	CNOT1	100	91.871	ENSPNAG00000000246	cnot1	100	90.324	Pygocentrus_nattereri
ENSGAGG00000022646	CNOT1	100	97.476	ENSRNOG00000012271	Cnot1	100	97.476	Rattus_norvegicus
ENSGAGG00000022646	CNOT1	100	95.721	ENSRBIG00000044598	CNOT1	100	95.721	Rhinopithecus_bieti
ENSGAGG00000022646	CNOT1	100	97.939	ENSRROG00000000906	CNOT1	100	97.939	Rhinopithecus_roxellana
ENSGAGG00000022646	CNOT1	57	30.882	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSGAGG00000022646	CNOT1	100	93.305	ENSSBOG00000029155	CNOT1	100	93.264	Saimiri_boliviensis_boliviensis
ENSGAGG00000022646	CNOT1	100	97.730	ENSSHAG00000012187	CNOT1	100	97.730	Sarcophilus_harrisii
ENSGAGG00000022646	CNOT1	100	90.109	ENSSFOG00015017614	cnot1	100	90.025	Scleropages_formosus
ENSGAGG00000022646	CNOT1	97	96.914	ENSSMAG00000013844	cnot1	100	96.914	Scophthalmus_maximus
ENSGAGG00000022646	CNOT1	97	96.774	ENSSDUG00000021491	cnot1	100	96.774	Seriola_dumerili
ENSGAGG00000022646	CNOT1	97	96.774	ENSSLDG00000014816	cnot1	100	96.774	Seriola_lalandi_dorsalis
ENSGAGG00000022646	CNOT1	84	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSGAGG00000022646	CNOT1	100	92.622	ENSSPAG00000018802	cnot1	100	90.432	Stegastes_partitus
ENSGAGG00000022646	CNOT1	100	97.812	ENSSSCG00000002799	CNOT1	100	98.603	Sus_scrofa
ENSGAGG00000022646	CNOT1	100	98.780	ENSTGUG00000005919	CNOT1	100	98.697	Taeniopygia_guttata
ENSGAGG00000022646	CNOT1	100	89.157	ENSTNIG00000018706	cnot1	100	88.699	Tetraodon_nigroviridis
ENSGAGG00000022646	CNOT1	81	97.544	ENSTBEG00000000720	CNOT1	80	97.887	Tupaia_belangeri
ENSGAGG00000022646	CNOT1	97	97.554	ENSTTRG00000008460	CNOT1	95	97.554	Tursiops_truncatus
ENSGAGG00000022646	CNOT1	100	97.939	ENSUAMG00000009251	CNOT1	100	97.939	Ursus_americanus
ENSGAGG00000022646	CNOT1	100	97.939	ENSUMAG00000021291	CNOT1	100	97.939	Ursus_maritimus
ENSGAGG00000022646	CNOT1	97	95.378	ENSVPAG00000008846	CNOT1	97	95.228	Vicugna_pacos
ENSGAGG00000022646	CNOT1	100	96.815	ENSVVUG00000024037	CNOT1	100	97.064	Vulpes_vulpes
ENSGAGG00000022646	CNOT1	100	90.097	ENSXETG00000015900	cnot1	100	90.013	Xenopus_tropicalis
ENSGAGG00000022646	CNOT1	100	91.470	ENSXCOG00000013552	cnot1	100	89.085	Xiphophorus_couchianus
ENSGAGG00000022646	CNOT1	100	91.470	ENSXMAG00000006031	cnot1	100	89.127	Xiphophorus_maculatus