EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000022872 (Gene tree)
Gene ID: -
Gene Symbol: TRUB2
Alias: CLONE24922
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 9836 bases
Position: chrPPEB01000768.1:238063-247898
Accession: 17170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000031851	TruB_N	PF01509.18	1.8e-24	1	1
ENSGAGP00000031850	TruB_N	PF01509.18	1.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000036125	TRUB2-202	1972	-	ENSGAGP00000031851	323 (aa)	-	-
ENSGAGT00000036124	TRUB2-201	1014	-	ENSGAGP00000031850	337 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000022872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000022872's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000022872	TRUB2	61	32.323	ENSGAGG00000009758	TRUB1	56	32.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000022872	TRUB2	88	67.905	ENSG00000167112	TRUB2	89	67.905	Homo_sapiens
ENSGAGG00000022872	TRUB2	84	42.105	ENSAPOG00000018284	-	79	55.556	Acanthochromis_polyacanthus
ENSGAGG00000022872	TRUB2	66	56.604	ENSAPOG00000015733	trub2	77	56.604	Acanthochromis_polyacanthus
ENSGAGG00000022872	TRUB2	89	64.667	ENSAMEG00000015395	TRUB2	90	64.667	Ailuropoda_melanoleuca
ENSGAGG00000022872	TRUB2	82	54.874	ENSACIG00000016500	trub2	84	54.874	Amphilophus_citrinellus
ENSGAGG00000022872	TRUB2	84	56.842	ENSAOCG00000002330	trub2	83	56.842	Amphiprion_ocellaris
ENSGAGG00000022872	TRUB2	84	56.842	ENSAPEG00000013177	trub2	83	56.842	Amphiprion_percula
ENSGAGG00000022872	TRUB2	90	50.949	ENSATEG00000011371	trub2	99	50.949	Anabas_testudineus
ENSGAGG00000022872	TRUB2	87	69.048	ENSAPLG00000009254	TRUB2	95	69.521	Anas_platyrhynchos
ENSGAGG00000022872	TRUB2	90	72.848	ENSACAG00000007331	TRUB2	92	72.848	Anolis_carolinensis
ENSGAGG00000022872	TRUB2	88	66.554	ENSANAG00000036234	TRUB2	95	66.554	Aotus_nancymaae
ENSGAGG00000022872	TRUB2	82	54.874	ENSACLG00000010793	trub2	84	54.874	Astatotilapia_calliptera
ENSGAGG00000022872	TRUB2	83	57.092	ENSAMXG00000031679	trub2	81	57.092	Astyanax_mexicanus
ENSGAGG00000022872	TRUB2	86	68.041	ENSCJAG00000020009	TRUB2	88	68.041	Callithrix_jacchus
ENSGAGG00000022872	TRUB2	86	64.483	ENSCAFG00000020068	TRUB2	88	64.483	Canis_familiaris
ENSGAGG00000022872	TRUB2	50	63.529	ENSCAFG00020017325	-	96	63.529	Canis_lupus_dingo
ENSGAGG00000022872	TRUB2	86	67.241	ENSCHIG00000021160	TRUB2	88	67.241	Capra_hircus
ENSGAGG00000022872	TRUB2	86	67.241	ENSTSYG00000034163	TRUB2	88	67.241	Carlito_syrichta
ENSGAGG00000022872	TRUB2	81	65.900	ENSCAPG00000000223	TRUB2	90	65.248	Cavia_aperea
ENSGAGG00000022872	TRUB2	86	65.517	ENSCPOG00000013535	TRUB2	88	64.706	Cavia_porcellus
ENSGAGG00000022872	TRUB2	87	64.966	ENSCCAG00000028463	-	89	64.966	Cebus_capucinus
ENSGAGG00000022872	TRUB2	88	67.114	ENSCCAG00000026531	-	91	67.114	Cebus_capucinus
ENSGAGG00000022872	TRUB2	88	67.114	ENSCATG00000038234	TRUB2	90	67.114	Cercocebus_atys
ENSGAGG00000022872	TRUB2	87	64.966	ENSCLAG00000001702	TRUB2	90	64.966	Chinchilla_lanigera
ENSGAGG00000022872	TRUB2	88	63.973	ENSCSAG00000014117	TRUB2	89	63.973	Chlorocebus_sabaeus
ENSGAGG00000022872	TRUB2	86	66.207	ENSCHOG00000001555	TRUB2	88	66.207	Choloepus_hoffmanni
ENSGAGG00000022872	TRUB2	99	95.195	ENSCPBG00000025186	TRUB2	98	95.195	Chrysemys_picta_bellii
ENSGAGG00000022872	TRUB2	82	38.214	ENSCSAVG00000003930	-	86	38.214	Ciona_savignyi
ENSGAGG00000022872	TRUB2	88	60.135	ENSCANG00000016135	TRUB2	88	60.135	Colobus_angolensis_palliatus
ENSGAGG00000022872	TRUB2	86	65.862	ENSCGRG00001024441	Trub2	91	63.529	Cricetulus_griseus_chok1gshd
ENSGAGG00000022872	TRUB2	86	65.862	ENSCGRG00000005633	Trub2	88	65.862	Cricetulus_griseus_crigri
ENSGAGG00000022872	TRUB2	96	48.297	ENSCSEG00000001331	trub2	95	48.297	Cynoglossus_semilaevis
ENSGAGG00000022872	TRUB2	84	53.710	ENSCVAG00000009901	trub2	85	53.710	Cyprinodon_variegatus
ENSGAGG00000022872	TRUB2	82	55.072	ENSDARG00000028379	trub2	78	55.072	Danio_rerio
ENSGAGG00000022872	TRUB2	95	61.755	ENSDNOG00000045679	-	96	61.755	Dasypus_novemcinctus
ENSGAGG00000022872	TRUB2	90	44.674	ENSDNOG00000043967	-	91	44.932	Dasypus_novemcinctus
ENSGAGG00000022872	TRUB2	88	66.102	ENSDORG00000016222	Trub2	93	66.102	Dipodomys_ordii
ENSGAGG00000022872	TRUB2	90	64.686	ENSETEG00000009114	TRUB2	93	64.686	Echinops_telfairi
ENSGAGG00000022872	TRUB2	68	43.293	ENSEBUG00000015723	trub2	84	43.293	Eptatretus_burgeri
ENSGAGG00000022872	TRUB2	86	65.517	ENSEASG00005016819	TRUB2	88	65.517	Equus_asinus_asinus
ENSGAGG00000022872	TRUB2	86	65.862	ENSECAG00000023520	TRUB2	88	65.862	Equus_caballus
ENSGAGG00000022872	TRUB2	95	62.187	ENSEEUG00000008908	TRUB2	95	62.187	Erinaceus_europaeus
ENSGAGG00000022872	TRUB2	88	53.698	ENSELUG00000002376	trub2	97	53.698	Esox_lucius
ENSGAGG00000022872	TRUB2	91	65.359	ENSFCAG00000005839	TRUB2	95	65.359	Felis_catus
ENSGAGG00000022872	TRUB2	81	71.483	ENSFALG00000001364	TRUB2	85	72.075	Ficedula_albicollis
ENSGAGG00000022872	TRUB2	86	66.552	ENSFDAG00000021374	TRUB2	88	67.647	Fukomys_damarensis
ENSGAGG00000022872	TRUB2	83	48.582	ENSFHEG00000014655	trub2	83	48.582	Fundulus_heteroclitus
ENSGAGG00000022872	TRUB2	82	49.275	ENSGMOG00000000981	trub2	92	49.275	Gadus_morhua
ENSGAGG00000022872	TRUB2	89	69.079	ENSGALG00000004920	TRUB2	74	69.307	Gallus_gallus
ENSGAGG00000022872	TRUB2	86	55.137	ENSGAFG00000010107	trub2	87	55.137	Gambusia_affinis
ENSGAGG00000022872	TRUB2	84	54.225	ENSGACG00000001476	trub2	86	54.225	Gasterosteus_aculeatus
ENSGAGG00000022872	TRUB2	88	67.568	ENSGGOG00000014780	TRUB2	89	67.568	Gorilla_gorilla
ENSGAGG00000022872	TRUB2	82	54.874	ENSHBUG00000022384	trub2	84	54.874	Haplochromis_burtoni
ENSGAGG00000022872	TRUB2	87	64.505	ENSHGLG00000016715	TRUB2	89	64.505	Heterocephalus_glaber_female
ENSGAGG00000022872	TRUB2	87	64.505	ENSHGLG00100016548	TRUB2	89	64.505	Heterocephalus_glaber_male
ENSGAGG00000022872	TRUB2	94	52.201	ENSHCOG00000017748	trub2	96	52.201	Hippocampus_comes
ENSGAGG00000022872	TRUB2	86	66.207	ENSSTOG00000022617	-	88	66.207	Ictidomys_tridecemlineatus
ENSGAGG00000022872	TRUB2	86	66.207	ENSSTOG00000008024	-	88	66.207	Ictidomys_tridecemlineatus
ENSGAGG00000022872	TRUB2	93	56.825	ENSJJAG00000019181	Trub2	92	56.825	Jaculus_jaculus
ENSGAGG00000022872	TRUB2	84	54.225	ENSKMAG00000007861	trub2	85	54.225	Kryptolebias_marmoratus
ENSGAGG00000022872	TRUB2	84	53.169	ENSLBEG00000000907	trub2	84	53.169	Labrus_bergylta
ENSGAGG00000022872	TRUB2	86	71.134	ENSLACG00000001515	TRUB2	86	71.134	Latimeria_chalumnae
ENSGAGG00000022872	TRUB2	86	61.379	ENSLOCG00000000885	trub2	96	61.379	Lepisosteus_oculatus
ENSGAGG00000022872	TRUB2	86	66.897	ENSLAFG00000002174	TRUB2	96	66.897	Loxodonta_africana
ENSGAGG00000022872	TRUB2	88	67.450	ENSMFAG00000000881	TRUB2	90	67.450	Macaca_fascicularis
ENSGAGG00000022872	TRUB2	88	67.450	ENSMMUG00000014146	TRUB2	90	67.450	Macaca_mulatta
ENSGAGG00000022872	TRUB2	88	67.114	ENSMNEG00000011189	TRUB2	90	67.114	Macaca_nemestrina
ENSGAGG00000022872	TRUB2	88	67.450	ENSMLEG00000037270	TRUB2	90	67.450	Mandrillus_leucophaeus
ENSGAGG00000022872	TRUB2	86	55.479	ENSMAMG00000023643	trub2	96	55.479	Mastacembelus_armatus
ENSGAGG00000022872	TRUB2	82	55.235	ENSMZEG00005016018	trub2	84	55.235	Maylandia_zebra
ENSGAGG00000022872	TRUB2	62	76.000	ENSMGAG00000003894	TRUB2	100	76.000	Meleagris_gallopavo
ENSGAGG00000022872	TRUB2	86	66.897	ENSMAUG00000010403	Trub2	94	61.749	Mesocricetus_auratus
ENSGAGG00000022872	TRUB2	89	65.116	ENSMICG00000047032	TRUB2	90	65.116	Microcebus_murinus
ENSGAGG00000022872	TRUB2	86	66.207	ENSMOCG00000014291	Trub2	96	66.207	Microtus_ochrogaster
ENSGAGG00000022872	TRUB2	82	53.430	ENSMMOG00000021674	trub2	85	53.430	Mola_mola
ENSGAGG00000022872	TRUB2	85	67.014	ENSMODG00000005940	TRUB2	97	67.014	Monodelphis_domestica
ENSGAGG00000022872	TRUB2	84	57.491	ENSMALG00000021231	trub2	85	57.491	Monopterus_albus
ENSGAGG00000022872	TRUB2	86	65.979	MGP_CAROLIEiJ_G0023368	Trub2	88	65.979	Mus_caroli
ENSGAGG00000022872	TRUB2	86	66.667	ENSMUSG00000039826	Trub2	88	66.667	Mus_musculus
ENSGAGG00000022872	TRUB2	86	65.979	MGP_PahariEiJ_G0024826	Trub2	88	65.979	Mus_pahari
ENSGAGG00000022872	TRUB2	86	66.323	MGP_SPRETEiJ_G0024286	Trub2	94	61.749	Mus_spretus
ENSGAGG00000022872	TRUB2	89	64.452	ENSMPUG00000013206	TRUB2	82	64.452	Mustela_putorius_furo
ENSGAGG00000022872	TRUB2	89	65.667	ENSMLUG00000005256	TRUB2	90	65.667	Myotis_lucifugus
ENSGAGG00000022872	TRUB2	89	64.333	ENSNGAG00000018679	Trub2	91	64.333	Nannospalax_galili
ENSGAGG00000022872	TRUB2	82	55.596	ENSNBRG00000016294	trub2	84	55.596	Neolamprologus_brichardi
ENSGAGG00000022872	TRUB2	88	66.554	ENSNLEG00000017556	TRUB2	89	66.554	Nomascus_leucogenys
ENSGAGG00000022872	TRUB2	85	71.181	ENSMEUG00000000484	TRUB2	93	71.181	Notamacropus_eugenii
ENSGAGG00000022872	TRUB2	86	62.284	ENSOPRG00000001981	TRUB2	88	62.284	Ochotona_princeps
ENSGAGG00000022872	TRUB2	86	65.517	ENSODEG00000017292	TRUB2	89	65.517	Octodon_degus
ENSGAGG00000022872	TRUB2	92	51.603	ENSONIG00000004230	trub2	94	51.603	Oreochromis_niloticus
ENSGAGG00000022872	TRUB2	58	70.430	ENSOANG00000029023	-	83	70.430	Ornithorhynchus_anatinus
ENSGAGG00000022872	TRUB2	86	64.138	ENSOCUG00000026296	TRUB2	79	64.138	Oryctolagus_cuniculus
ENSGAGG00000022872	TRUB2	93	50.000	ENSORLG00000020011	trub2	84	53.929	Oryzias_latipes
ENSGAGG00000022872	TRUB2	90	51.948	ENSORLG00020011028	trub2	90	51.948	Oryzias_latipes_hni
ENSGAGG00000022872	TRUB2	93	50.784	ENSORLG00015007494	trub2	97	50.784	Oryzias_latipes_hsok
ENSGAGG00000022872	TRUB2	95	50.156	ENSOMEG00000006702	trub2	97	50.156	Oryzias_melastigma
ENSGAGG00000022872	TRUB2	70	66.957	ENSOARG00000003785	-	87	69.406	Ovis_aries
ENSGAGG00000022872	TRUB2	89	67.000	ENSOARG00000010579	-	90	67.000	Ovis_aries
ENSGAGG00000022872	TRUB2	88	68.243	ENSPPAG00000043146	TRUB2	89	68.243	Pan_paniscus
ENSGAGG00000022872	TRUB2	91	65.359	ENSPPRG00000006307	TRUB2	95	65.359	Panthera_pardus
ENSGAGG00000022872	TRUB2	91	65.686	ENSPTIG00000012366	TRUB2	95	65.686	Panthera_tigris_altaica
ENSGAGG00000022872	TRUB2	88	67.905	ENSPTRG00000052151	-	89	67.905	Pan_troglodytes
ENSGAGG00000022872	TRUB2	88	67.905	ENSPTRG00000021423	TRUB2	89	67.905	Pan_troglodytes
ENSGAGG00000022872	TRUB2	88	67.450	ENSPANG00000025856	TRUB2	90	67.450	Papio_anubis
ENSGAGG00000022872	TRUB2	83	58.007	ENSPKIG00000019769	trub2	92	58.007	Paramormyrops_kingsleyae
ENSGAGG00000022872	TRUB2	89	83.278	ENSPSIG00000015701	TRUB2	100	83.278	Pelodiscus_sinensis
ENSGAGG00000022872	TRUB2	85	55.363	ENSPMGG00000010206	trub2	90	55.363	Periophthalmus_magnuspinnatus
ENSGAGG00000022872	TRUB2	86	64.605	ENSPEMG00000017893	Trub2	91	63.158	Peromyscus_maniculatus_bairdii
ENSGAGG00000022872	TRUB2	88	70.847	ENSPCIG00000026731	TRUB2	94	70.847	Phascolarctos_cinereus
ENSGAGG00000022872	TRUB2	82	56.272	ENSPFOG00000018018	trub2	75	55.986	Poecilia_formosa
ENSGAGG00000022872	TRUB2	82	56.631	ENSPLAG00000010484	trub2	81	56.338	Poecilia_latipinna
ENSGAGG00000022872	TRUB2	93	52.077	ENSPMEG00000012913	trub2	92	52.090	Poecilia_mexicana
ENSGAGG00000022872	TRUB2	82	55.957	ENSPREG00000002549	trub2	83	55.674	Poecilia_reticulata
ENSGAGG00000022872	TRUB2	88	65.541	ENSPPYG00000019650	TRUB2	91	65.541	Pongo_abelii
ENSGAGG00000022872	TRUB2	86	66.897	ENSPCAG00000015068	TRUB2	89	66.897	Procavia_capensis
ENSGAGG00000022872	TRUB2	89	65.333	ENSPCOG00000017100	TRUB2	90	65.333	Propithecus_coquereli
ENSGAGG00000022872	TRUB2	81	67.557	ENSPVAG00000001224	TRUB2	92	67.518	Pteropus_vampyrus
ENSGAGG00000022872	TRUB2	82	55.235	ENSPNYG00000013666	trub2	84	55.235	Pundamilia_nyererei
ENSGAGG00000022872	TRUB2	83	56.383	ENSPNAG00000017292	trub2	81	56.383	Pygocentrus_nattereri
ENSGAGG00000022872	TRUB2	86	64.948	ENSRNOG00000043189	Trub2	90	64.948	Rattus_norvegicus
ENSGAGG00000022872	TRUB2	88	60.403	ENSRBIG00000006965	TRUB2	89	60.403	Rhinopithecus_bieti
ENSGAGG00000022872	TRUB2	88	67.450	ENSRROG00000042928	TRUB2	90	67.450	Rhinopithecus_roxellana
ENSGAGG00000022872	TRUB2	86	67.010	ENSSBOG00000022439	TRUB2	88	67.010	Saimiri_boliviensis_boliviensis
ENSGAGG00000022872	TRUB2	85	59.722	ENSSFOG00015013391	trub2	92	59.722	Scleropages_formosus
ENSGAGG00000022872	TRUB2	85	56.207	ENSSMAG00000020820	trub2	88	56.207	Scophthalmus_maximus
ENSGAGG00000022872	TRUB2	82	55.396	ENSSDUG00000016928	trub2	85	54.737	Seriola_dumerili
ENSGAGG00000022872	TRUB2	82	54.317	ENSSLDG00000024701	trub2	85	53.684	Seriola_lalandi_dorsalis
ENSGAGG00000022872	TRUB2	97	67.073	ENSSPUG00000015515	TRUB2	98	67.073	Sphenodon_punctatus
ENSGAGG00000022872	TRUB2	84	56.690	ENSSPAG00000017865	trub2	86	56.690	Stegastes_partitus
ENSGAGG00000022872	TRUB2	86	68.621	ENSSSCG00000005645	TRUB2	88	69.349	Sus_scrofa
ENSGAGG00000022872	TRUB2	81	73.664	ENSTGUG00000003704	TRUB2	100	73.664	Taeniopygia_guttata
ENSGAGG00000022872	TRUB2	82	51.986	ENSTRUG00000015499	trub2	85	51.986	Takifugu_rubripes
ENSGAGG00000022872	TRUB2	82	54.348	ENSTNIG00000014721	trub2	95	54.348	Tetraodon_nigroviridis
ENSGAGG00000022872	TRUB2	59	67.708	ENSTBEG00000000586	TRUB2	85	67.708	Tupaia_belangeri
ENSGAGG00000022872	TRUB2	86	64.138	ENSTTRG00000016486	TRUB2	88	64.138	Tursiops_truncatus
ENSGAGG00000022872	TRUB2	89	64.333	ENSUAMG00000020276	TRUB2	88	64.333	Ursus_americanus
ENSGAGG00000022872	TRUB2	89	64.000	ENSUMAG00000022051	TRUB2	88	64.000	Ursus_maritimus
ENSGAGG00000022872	TRUB2	89	49.667	ENSVPAG00000005793	TRUB2	94	49.667	Vicugna_pacos
ENSGAGG00000022872	TRUB2	86	64.483	ENSVVUG00000013451	TRUB2	83	64.483	Vulpes_vulpes
ENSGAGG00000022872	TRUB2	84	65.371	ENSXETG00000003973	trub2	87	65.371	Xenopus_tropicalis
ENSGAGG00000022872	TRUB2	82	55.235	ENSXCOG00000008759	trub2	84	54.965	Xiphophorus_couchianus
ENSGAGG00000022872	TRUB2	82	55.235	ENSXMAG00000015478	trub2	84	54.965	Xiphophorus_maculatus