EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000022991 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 258 bases
Position: chrPPEB01002004.1:10974-11231
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000032079	LSM	PF01423.22	4.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000036371	-	258	-	ENSGAGP00000032079	85 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000022991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000022991's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000022991	-	67	91.228	ENSGAGG00000011163	-	100	91.228
ENSGAGG00000022991	-	80	45.588	ENSGAGG00000020980	LSM6	85	45.588
ENSGAGG00000022991	-	72	86.885	ENSGAGG00000014132	-	90	73.333
ENSGAGG00000022991	-	84	88.889	ENSGAGG00000012945	-	75	84.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000022991	-	80	94.118	ENSG00000139343	SNRPF	92	91.139	Homo_sapiens
ENSGAGG00000022991	-	87	85.897	ENSAPOG00000003377	snrpf	70	84.270	Acanthochromis_polyacanthus
ENSGAGG00000022991	-	87	77.027	ENSAMEG00000018718	-	98	77.381	Ailuropoda_melanoleuca
ENSGAGG00000022991	-	80	94.118	ENSAMEG00000002166	-	93	91.139	Ailuropoda_melanoleuca
ENSGAGG00000022991	-	80	91.176	ENSACIG00000013216	snrpf	93	88.608	Amphilophus_citrinellus
ENSGAGG00000022991	-	80	91.176	ENSAOCG00000015108	snrpf	93	88.608	Amphiprion_ocellaris
ENSGAGG00000022991	-	80	91.176	ENSAPEG00000022022	snrpf	93	88.608	Amphiprion_percula
ENSGAGG00000022991	-	80	91.176	ENSATEG00000022625	snrpf	85	88.608	Anabas_testudineus
ENSGAGG00000022991	-	80	92.647	ENSACAG00000014073	SNRPF	91	89.873	Anolis_carolinensis
ENSGAGG00000022991	-	80	66.176	ENSANAG00000025860	-	90	65.823	Aotus_nancymaae
ENSGAGG00000022991	-	80	94.118	ENSANAG00000032845	SNRPF	92	91.139	Aotus_nancymaae
ENSGAGG00000022991	-	80	88.235	ENSANAG00000020297	-	72	86.076	Aotus_nancymaae
ENSGAGG00000022991	-	80	91.176	ENSACLG00000016066	snrpf	93	88.608	Astatotilapia_calliptera
ENSGAGG00000022991	-	80	89.706	ENSAMXG00000007421	snrpf	92	87.342	Astyanax_mexicanus
ENSGAGG00000022991	-	80	94.118	ENSBTAG00000016271	SNRPF	92	91.139	Bos_taurus
ENSGAGG00000022991	-	84	88.732	ENSBTAG00000050012	-	88	88.732	Bos_taurus
ENSGAGG00000022991	-	86	68.493	WBGene00004918	snr-5	86	68.493	Caenorhabditis_elegans
ENSGAGG00000022991	-	80	94.118	ENSCJAG00000002705	-	92	91.139	Callithrix_jacchus
ENSGAGG00000022991	-	80	94.118	ENSCAFG00000006395	-	71	91.139	Canis_familiaris
ENSGAGG00000022991	-	78	87.879	ENSCAFG00000031151	-	92	84.810	Canis_familiaris
ENSGAGG00000022991	-	87	85.135	ENSCAFG00020013161	-	79	85.135	Canis_lupus_dingo
ENSGAGG00000022991	-	78	87.879	ENSCAFG00020010823	-	92	84.810	Canis_lupus_dingo
ENSGAGG00000022991	-	80	86.957	ENSTSYG00000036502	-	92	85.000	Carlito_syrichta
ENSGAGG00000022991	-	80	80.882	ENSTSYG00000030635	-	92	79.747	Carlito_syrichta
ENSGAGG00000022991	-	93	81.013	ENSTSYG00000031636	-	66	81.013	Carlito_syrichta
ENSGAGG00000022991	-	80	94.118	ENSCAPG00000007242	SNRPF	93	91.139	Cavia_aperea
ENSGAGG00000022991	-	80	94.118	ENSCPOG00000013898	SNRPF	92	91.139	Cavia_porcellus
ENSGAGG00000022991	-	78	93.939	ENSCCAG00000017356	-	92	91.139	Cebus_capucinus
ENSGAGG00000022991	-	89	82.278	ENSCCAG00000033627	-	62	82.278	Cebus_capucinus
ENSGAGG00000022991	-	80	94.118	ENSCCAG00000037378	-	92	91.139	Cebus_capucinus
ENSGAGG00000022991	-	80	94.118	ENSCLAG00000007200	SNRPF	92	91.139	Chinchilla_lanigera
ENSGAGG00000022991	-	80	94.118	ENSCSAG00000003602	-	64	91.139	Chlorocebus_sabaeus
ENSGAGG00000022991	-	67	92.982	ENSCHOG00000009392	SNRPF	89	92.982	Choloepus_hoffmanni
ENSGAGG00000022991	-	80	85.294	ENSCPBG00000006227	-	92	82.278	Chrysemys_picta_bellii
ENSGAGG00000022991	-	88	85.897	ENSCPBG00000026463	-	91	85.897	Chrysemys_picta_bellii
ENSGAGG00000022991	-	92	84.810	ENSCPBG00000001985	-	94	84.810	Chrysemys_picta_bellii
ENSGAGG00000022991	-	89	90.909	ENSCPBG00000024287	-	62	90.909	Chrysemys_picta_bellii
ENSGAGG00000022991	-	86	86.301	ENSCSAVG00000007498	-	83	86.301	Ciona_savignyi
ENSGAGG00000022991	-	80	86.765	ENSCGRG00001008965	-	61	84.810	Cricetulus_griseus_chok1gshd
ENSGAGG00000022991	-	80	94.118	ENSCGRG00001017100	-	92	91.139	Cricetulus_griseus_chok1gshd
ENSGAGG00000022991	-	80	94.118	ENSCGRG00000000336	-	92	91.139	Cricetulus_griseus_crigri
ENSGAGG00000022991	-	86	84.932	ENSCGRG00000018878	-	91	84.932	Cricetulus_griseus_crigri
ENSGAGG00000022991	-	80	89.706	ENSCSEG00000004748	snrpf	92	87.342	Cynoglossus_semilaevis
ENSGAGG00000022991	-	86	85.714	ENSCVAG00000000397	snrpf	70	84.091	Cyprinodon_variegatus
ENSGAGG00000022991	-	80	88.571	ENSDARG00000105037	snrpf	92	86.420	Danio_rerio
ENSGAGG00000022991	-	80	92.647	ENSDNOG00000048989	-	71	89.873	Dasypus_novemcinctus
ENSGAGG00000022991	-	80	94.118	ENSDNOG00000043775	-	51	91.139	Dasypus_novemcinctus
ENSGAGG00000022991	-	80	79.412	ENSDNOG00000049373	-	69	75.949	Dasypus_novemcinctus
ENSGAGG00000022991	-	76	84.615	ENSDORG00000025351	-	90	84.615	Dipodomys_ordii
ENSGAGG00000022991	-	69	91.525	ENSDORG00000029740	-	85	88.571	Dipodomys_ordii
ENSGAGG00000022991	-	89	74.684	FBgn0000426	SmF	90	74.684	Drosophila_melanogaster
ENSGAGG00000022991	-	80	94.118	ENSETEG00000001558	-	92	91.139	Echinops_telfairi
ENSGAGG00000022991	-	88	72.368	ENSEBUG00000001793	-	82	72.368	Eptatretus_burgeri
ENSGAGG00000022991	-	80	94.118	ENSECAG00000019817	SNRPF	64	91.139	Equus_caballus
ENSGAGG00000022991	-	80	94.118	ENSEEUG00000013509	SNRPF	93	91.139	Erinaceus_europaeus
ENSGAGG00000022991	-	80	89.706	ENSELUG00000003121	RUXF	92	87.342	Esox_lucius
ENSGAGG00000022991	-	89	83.544	ENSELUG00000007737	RUXF	91	83.544	Esox_lucius
ENSGAGG00000022991	-	80	70.588	ENSFCAG00000021942	-	91	70.886	Felis_catus
ENSGAGG00000022991	-	87	68.831	ENSFCAG00000031148	-	71	68.831	Felis_catus
ENSGAGG00000022991	-	80	94.118	ENSFCAG00000029966	-	92	91.139	Felis_catus
ENSGAGG00000022991	-	80	94.118	ENSFALG00000010799	SNRPF	92	91.139	Ficedula_albicollis
ENSGAGG00000022991	-	80	94.118	ENSFDAG00000002831	-	92	91.139	Fukomys_damarensis
ENSGAGG00000022991	-	80	91.176	ENSFHEG00000003240	snrpf	71	86.420	Fundulus_heteroclitus
ENSGAGG00000022991	-	80	91.176	ENSGMOG00000007741	snrpf	93	88.608	Gadus_morhua
ENSGAGG00000022991	-	80	94.118	ENSGALG00000011409	SNRPF	92	91.139	Gallus_gallus
ENSGAGG00000022991	-	86	87.838	ENSGAFG00000016187	snrpf	98	85.882	Gambusia_affinis
ENSGAGG00000022991	-	80	91.176	ENSGACG00000020055	snrpf	93	88.608	Gasterosteus_aculeatus
ENSGAGG00000022991	-	87	71.429	ENSGGOG00000039936	-	86	71.429	Gorilla_gorilla
ENSGAGG00000022991	-	80	94.118	ENSGGOG00000001127	-	93	91.139	Gorilla_gorilla
ENSGAGG00000022991	-	84	67.606	ENSGGOG00000039564	-	85	67.606	Gorilla_gorilla
ENSGAGG00000022991	-	80	94.118	ENSHGLG00000009108	SNRPF	92	91.139	Heterocephalus_glaber_female
ENSGAGG00000022991	-	80	92.647	ENSHGLG00000021172	-	92	89.873	Heterocephalus_glaber_female
ENSGAGG00000022991	-	80	92.647	ENSHGLG00100019596	-	92	89.873	Heterocephalus_glaber_male
ENSGAGG00000022991	-	80	94.118	ENSHGLG00100008103	-	93	91.139	Heterocephalus_glaber_male
ENSGAGG00000022991	-	74	77.465	ENSHCOG00000018663	snrpf	55	77.465	Hippocampus_comes
ENSGAGG00000022991	-	80	91.176	ENSIPUG00000018994	snrpf	93	88.608	Ictalurus_punctatus
ENSGAGG00000022991	-	80	94.118	ENSSTOG00000010434	-	92	91.139	Ictidomys_tridecemlineatus
ENSGAGG00000022991	-	75	90.769	ENSJJAG00000004828	-	100	90.769	Jaculus_jaculus
ENSGAGG00000022991	-	88	89.474	ENSJJAG00000011272	-	100	87.356	Jaculus_jaculus
ENSGAGG00000022991	-	89	84.416	ENSJJAG00000010502	-	92	84.416	Jaculus_jaculus
ENSGAGG00000022991	-	92	78.481	ENSJJAG00000004558	-	94	78.481	Jaculus_jaculus
ENSGAGG00000022991	-	80	91.176	ENSKMAG00000013566	snrpf	92	88.608	Kryptolebias_marmoratus
ENSGAGG00000022991	-	80	89.706	ENSLBEG00000008800	snrpf	92	87.342	Labrus_bergylta
ENSGAGG00000022991	-	80	94.118	ENSLACG00000002456	-	68	91.139	Latimeria_chalumnae
ENSGAGG00000022991	-	80	89.706	ENSLOCG00000015744	snrpf	92	87.342	Lepisosteus_oculatus
ENSGAGG00000022991	-	80	94.118	ENSLAFG00000017426	SNRPF	92	91.139	Loxodonta_africana
ENSGAGG00000022991	-	80	89.706	ENSMAMG00000016593	snrpf	93	87.342	Mastacembelus_armatus
ENSGAGG00000022991	-	80	91.176	ENSMZEG00005014701	snrpf	93	88.608	Maylandia_zebra
ENSGAGG00000022991	-	80	94.118	ENSMGAG00000011453	-	71	91.139	Meleagris_gallopavo
ENSGAGG00000022991	-	91	77.922	ENSMAUG00000010289	-	92	77.922	Mesocricetus_auratus
ENSGAGG00000022991	-	74	93.651	ENSMAUG00000016909	-	100	90.541	Mesocricetus_auratus
ENSGAGG00000022991	-	80	88.235	ENSMAUG00000008799	-	92	86.076	Mesocricetus_auratus
ENSGAGG00000022991	-	74	93.651	ENSMAUG00000019737	-	100	90.541	Mesocricetus_auratus
ENSGAGG00000022991	-	80	94.118	ENSMICG00000012153	-	92	91.139	Microcebus_murinus
ENSGAGG00000022991	-	80	86.765	ENSMICG00000030494	-	63	84.810	Microcebus_murinus
ENSGAGG00000022991	-	80	82.353	ENSMOCG00000022166	-	82	81.333	Microtus_ochrogaster
ENSGAGG00000022991	-	80	77.941	ENSMOCG00000020220	-	100	78.205	Microtus_ochrogaster
ENSGAGG00000022991	-	80	94.118	ENSMOCG00000020437	Snrpf	92	91.139	Microtus_ochrogaster
ENSGAGG00000022991	-	80	89.706	ENSMMOG00000007127	snrpf	93	87.342	Mola_mola
ENSGAGG00000022991	-	80	94.118	ENSMODG00000008091	SNRPF	69	91.139	Monodelphis_domestica
ENSGAGG00000022991	-	80	91.176	ENSMALG00000012328	snrpf	93	88.608	Monopterus_albus
ENSGAGG00000022991	-	80	94.118	MGP_CAROLIEiJ_G0015735	-	92	91.139	Mus_caroli
ENSGAGG00000022991	-	80	94.118	ENSMUSG00000020018	Snrpf	92	91.139	Mus_musculus
ENSGAGG00000022991	-	80	94.118	MGP_PahariEiJ_G0031350	Snrpf	92	91.139	Mus_pahari
ENSGAGG00000022991	-	80	94.118	MGP_SPRETEiJ_G0016553	Snrpf	92	91.139	Mus_spretus
ENSGAGG00000022991	-	80	94.118	ENSMPUG00000007176	-	71	91.139	Mustela_putorius_furo
ENSGAGG00000022991	-	89	73.418	ENSMLUG00000026269	-	75	73.418	Myotis_lucifugus
ENSGAGG00000022991	-	80	94.118	ENSMLUG00000027932	-	75	91.139	Myotis_lucifugus
ENSGAGG00000022991	-	80	94.118	ENSMLUG00000026149	-	75	91.139	Myotis_lucifugus
ENSGAGG00000022991	-	80	94.118	ENSMLUG00000013577	-	93	91.139	Myotis_lucifugus
ENSGAGG00000022991	-	80	94.118	ENSMLUG00000029201	-	75	91.139	Myotis_lucifugus
ENSGAGG00000022991	-	80	94.118	ENSNGAG00000024292	-	92	91.139	Nannospalax_galili
ENSGAGG00000022991	-	80	80.882	ENSNGAG00000005851	-	80	80.882	Nannospalax_galili
ENSGAGG00000022991	-	87	84.615	ENSNBRG00000011682	snrpf	91	83.146	Neolamprologus_brichardi
ENSGAGG00000022991	-	80	63.235	ENSMEUG00000000671	SNRPF	93	64.557	Notamacropus_eugenii
ENSGAGG00000022991	-	80	94.118	ENSODEG00000010328	-	93	91.139	Octodon_degus
ENSGAGG00000022991	-	80	94.118	ENSOCUG00000010925	SNRPF	70	91.139	Oryctolagus_cuniculus
ENSGAGG00000022991	-	80	89.706	ENSORLG00020008216	snrpf	93	87.342	Oryzias_latipes_hni
ENSGAGG00000022991	-	80	89.706	ENSORLG00015007418	snrpf	93	87.342	Oryzias_latipes_hsok
ENSGAGG00000022991	-	80	91.176	ENSOMEG00000003018	snrpf	93	88.608	Oryzias_melastigma
ENSGAGG00000022991	-	80	92.647	ENSOGAG00000030323	-	92	88.608	Otolemur_garnettii
ENSGAGG00000022991	-	80	94.118	ENSOARG00000011853	-	69	91.139	Ovis_aries
ENSGAGG00000022991	-	84	69.014	ENSPPAG00000037479	-	85	69.014	Pan_paniscus
ENSGAGG00000022991	-	87	71.429	ENSPPAG00000037544	-	86	71.429	Pan_paniscus
ENSGAGG00000022991	-	80	94.118	ENSPPRG00000005875	-	92	91.139	Panthera_pardus
ENSGAGG00000022991	-	87	68.831	ENSPPRG00000007449	-	79	68.831	Panthera_pardus
ENSGAGG00000022991	-	80	94.118	ENSPTIG00000007520	SNRPF	92	91.139	Panthera_tigris_altaica
ENSGAGG00000022991	-	87	70.130	ENSPTIG00000005117	-	92	70.130	Panthera_tigris_altaica
ENSGAGG00000022991	-	87	71.429	ENSPTRG00000043814	-	86	71.429	Pan_troglodytes
ENSGAGG00000022991	-	84	67.606	ENSPTRG00000047717	-	85	67.606	Pan_troglodytes
ENSGAGG00000022991	-	91	81.250	ENSPKIG00000014784	snrpf	100	80.220	Paramormyrops_kingsleyae
ENSGAGG00000022991	-	80	94.118	ENSPSIG00000016462	SNRPF	92	91.139	Pelodiscus_sinensis
ENSGAGG00000022991	-	80	89.706	ENSPMGG00000023548	snrpf	93	87.342	Periophthalmus_magnuspinnatus
ENSGAGG00000022991	-	80	94.118	ENSPEMG00000023326	Snrpf	92	91.139	Peromyscus_maniculatus_bairdii
ENSGAGG00000022991	-	80	91.176	ENSPLAG00000023932	snrpf	93	88.608	Poecilia_latipinna
ENSGAGG00000022991	-	80	91.176	ENSPMEG00000003377	snrpf	93	88.608	Poecilia_mexicana
ENSGAGG00000022991	-	91	84.416	ENSPREG00000022635	snrpf	100	82.955	Poecilia_reticulata
ENSGAGG00000022991	-	80	94.118	ENSPPYG00000004847	-	92	91.139	Pongo_abelii
ENSGAGG00000022991	-	80	94.118	ENSPCOG00000023833	-	92	91.139	Propithecus_coquereli
ENSGAGG00000022991	-	80	94.118	ENSPVAG00000009036	SNRPF	92	91.139	Pteropus_vampyrus
ENSGAGG00000022991	-	80	91.176	ENSPNYG00000021712	snrpf	93	88.608	Pundamilia_nyererei
ENSGAGG00000022991	-	80	91.176	ENSPNAG00000019117	snrpf	93	88.608	Pygocentrus_nattereri
ENSGAGG00000022991	-	80	94.118	ENSRNOG00000005556	Snrpf	92	91.139	Rattus_norvegicus
ENSGAGG00000022991	-	80	91.176	ENSRBIG00000030414	-	88	88.158	Rhinopithecus_bieti
ENSGAGG00000022991	-	80	91.176	ENSRROG00000021975	-	92	87.342	Rhinopithecus_roxellana
ENSGAGG00000022991	-	78	55.224	YPR182W	SMX3	78	55.224	Saccharomyces_cerevisiae
ENSGAGG00000022991	-	80	94.118	ENSSBOG00000036179	-	92	91.139	Saimiri_boliviensis_boliviensis
ENSGAGG00000022991	-	80	94.118	ENSSBOG00000012868	-	92	91.139	Saimiri_boliviensis_boliviensis
ENSGAGG00000022991	-	80	76.471	ENSSBOG00000027638	-	91	75.949	Saimiri_boliviensis_boliviensis
ENSGAGG00000022991	-	80	80.882	ENSSBOG00000032297	-	91	79.747	Saimiri_boliviensis_boliviensis
ENSGAGG00000022991	-	80	94.118	ENSSHAG00000012294	SNRPF	71	91.139	Sarcophilus_harrisii
ENSGAGG00000022991	-	79	80.597	ENSSFOG00015021523	snrpf	100	80.597	Scleropages_formosus
ENSGAGG00000022991	-	80	91.176	ENSSMAG00000005533	snrpf	91	88.608	Scophthalmus_maximus
ENSGAGG00000022991	-	68	89.655	ENSSDUG00000016283	snrpf	69	89.655	Seriola_dumerili
ENSGAGG00000022991	-	86	74.324	ENSSLDG00000003885	-	90	74.324	Seriola_lalandi_dorsalis
ENSGAGG00000022991	-	80	91.176	ENSSLDG00000005119	snrpf	92	88.608	Seriola_lalandi_dorsalis
ENSGAGG00000022991	-	80	94.118	ENSSPUG00000014590	-	93	91.139	Sphenodon_punctatus
ENSGAGG00000022991	-	91	83.117	ENSSPAG00000003283	snrpf	100	81.818	Stegastes_partitus
ENSGAGG00000022991	-	80	94.118	ENSSSCG00000000895	SNRPF	92	91.139	Sus_scrofa
ENSGAGG00000022991	-	67	89.474	ENSTRUG00000014956	snrpf	99	86.765	Takifugu_rubripes
ENSGAGG00000022991	-	80	89.706	ENSTNIG00000012672	snrpf	92	87.342	Tetraodon_nigroviridis
ENSGAGG00000022991	-	80	63.235	ENSTTRG00000006070	SNRPF	92	64.557	Tursiops_truncatus
ENSGAGG00000022991	-	80	94.118	ENSUAMG00000008176	-	92	91.139	Ursus_americanus
ENSGAGG00000022991	-	95	77.108	ENSUAMG00000001101	-	98	77.108	Ursus_americanus
ENSGAGG00000022991	-	80	94.118	ENSUMAG00000003528	-	92	91.139	Ursus_maritimus
ENSGAGG00000022991	-	86	79.452	ENSUMAG00000006177	-	98	75.904	Ursus_maritimus
ENSGAGG00000022991	-	80	94.118	ENSVPAG00000008712	-	92	91.139	Vicugna_pacos
ENSGAGG00000022991	-	84	84.507	ENSVVUG00000023821	-	91	84.507	Vulpes_vulpes
ENSGAGG00000022991	-	80	68.571	ENSXETG00000021630	snrpf	93	66.667	Xenopus_tropicalis
ENSGAGG00000022991	-	86	87.838	ENSXCOG00000013860	snrpf	98	85.882	Xiphophorus_couchianus
ENSGAGG00000022991	-	80	91.176	ENSXMAG00000015448	snrpf	93	88.608	Xiphophorus_maculatus