EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000023170 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 3451 bases
Position: chrPPEB01003160.1:122916-126366
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000032379	zf-CCHC	PF00098.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000036709	-	3451	-	ENSGAGP00000032379	986 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000023170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000023170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000023170	-	72	99.008	ENSGAGG00000014451	-	100	99.008
ENSGAGG00000023170	-	76	98.136	ENSGAGG00000025282	-	65	98.136
ENSGAGG00000023170	-	51	97.809	ENSGAGG00000013819	-	100	97.809
ENSGAGG00000023170	-	94	99.132	ENSGAGG00000002373	-	100	99.132
ENSGAGG00000023170	-	76	95.789	ENSGAGG00000025144	-	100	95.789
ENSGAGG00000023170	-	100	94.031	ENSGAGG00000022240	-	65	94.325
ENSGAGG00000023170	-	65	97.642	ENSGAGG00000023113	-	100	97.642
ENSGAGG00000023170	-	56	98.367	ENSGAGG00000021273	-	100	98.367
ENSGAGG00000023170	-	78	97.280	ENSGAGG00000003017	-	100	97.280
ENSGAGG00000023170	-	66	30.725	ENSGAGG00000019653	-	94	48.374
ENSGAGG00000023170	-	78	92.240	ENSGAGG00000022743	-	100	92.741
ENSGAGG00000023170	-	53	94.423	ENSGAGG00000004509	-	100	94.423
ENSGAGG00000023170	-	80	98.983	ENSGAGG00000023108	-	100	98.983
ENSGAGG00000023170	-	74	95.053	ENSGAGG00000024129	-	100	95.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000023170	-	74	37.353	ENSAPOG00000013711	-	86	37.353	Acanthochromis_polyacanthus
ENSGAGG00000023170	-	85	39.221	ENSACLG00000026879	-	56	39.221	Astatotilapia_calliptera
ENSGAGG00000023170	-	74	41.772	ENSACLG00000015735	-	90	41.872	Astatotilapia_calliptera
ENSGAGG00000023170	-	77	42.584	ENSACLG00000010042	-	62	42.584	Astatotilapia_calliptera
ENSGAGG00000023170	-	85	42.584	ENSACLG00000014619	-	56	42.155	Astatotilapia_calliptera
ENSGAGG00000023170	-	85	42.584	ENSACLG00000019876	-	55	42.155	Astatotilapia_calliptera
ENSGAGG00000023170	-	86	37.662	ENSACLG00000018060	-	53	37.662	Astatotilapia_calliptera
ENSGAGG00000023170	-	85	38.947	ENSAMXG00000031698	-	54	38.947	Astyanax_mexicanus
ENSGAGG00000023170	-	69	43.770	ENSFHEG00000000971	-	61	43.770	Fundulus_heteroclitus
ENSGAGG00000023170	-	78	44.478	ENSORLG00000028609	-	51	44.478	Oryzias_latipes
ENSGAGG00000023170	-	78	44.179	ENSORLG00000022369	-	54	44.179	Oryzias_latipes
ENSGAGG00000023170	-	78	44.478	ENSORLG00000030542	-	51	44.478	Oryzias_latipes
ENSGAGG00000023170	-	78	44.179	ENSORLG00000028795	-	51	44.179	Oryzias_latipes
ENSGAGG00000023170	-	79	41.018	ENSORLG00000027831	-	50	41.018	Oryzias_latipes
ENSGAGG00000023170	-	78	44.179	ENSORLG00015018878	-	51	44.179	Oryzias_latipes_hsok
ENSGAGG00000023170	-	78	44.179	ENSORLG00015017778	-	51	44.179	Oryzias_latipes_hsok
ENSGAGG00000023170	-	78	45.075	ENSOMEG00000003712	-	50	45.075	Oryzias_melastigma
ENSGAGG00000023170	-	71	40.380	ENSPSIG00000000767	-	51	40.380	Pelodiscus_sinensis
ENSGAGG00000023170	-	76	39.323	ENSPSIG00000000489	-	58	39.323	Pelodiscus_sinensis
ENSGAGG00000023170	-	68	40.852	ENSPSIG00000000994	-	56	40.852	Pelodiscus_sinensis
ENSGAGG00000023170	-	74	40.256	ENSPREG00000000390	-	51	40.256	Poecilia_reticulata
ENSGAGG00000023170	-	73	37.891	ENSPNAG00000022277	-	84	37.891	Pygocentrus_nattereri
ENSGAGG00000023170	-	74	37.569	ENSSLDG00000004385	-	85	37.569	Seriola_lalandi_dorsalis