EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000023209 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 39242 bases
Position: chrPPEB01003167.1:20461-59702
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000032435	Ago_hook	PF10427.9	2.9e-12	1	1
ENSGAGP00000032436	Ago_hook	PF10427.9	6.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000036774	TNRC6A-202	5565	-	ENSGAGP00000032436	1723 (aa)	-	-
ENSGAGT00000036773	TNRC6A-201	5580	-	ENSGAGP00000032435	1728 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000023209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000023209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000023209	TNRC6A	98	44.432	ENSGAGG00000022043	TNRC6C	99	44.287
ENSGAGG00000023209	TNRC6A	98	37.649	ENSGAGG00000025188	TNRC6B	90	38.047

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000023209	TNRC6A	99	81.886	ENSG00000090905	TNRC6A	100	92.547	Homo_sapiens
ENSGAGG00000023209	TNRC6A	99	79.754	ENSAMEG00000009333	TNRC6A	93	79.698	Ailuropoda_melanoleuca
ENSGAGG00000023209	TNRC6A	99	89.826	ENSAPLG00000009978	TNRC6A	94	90.107	Anas_platyrhynchos
ENSGAGG00000023209	TNRC6A	99	56.446	ENSACAG00000011857	TNRC6A	91	57.935	Anolis_carolinensis
ENSGAGG00000023209	TNRC6A	99	81.369	ENSANAG00000025252	TNRC6A	92	79.083	Aotus_nancymaae
ENSGAGG00000023209	TNRC6A	100	58.630	ENSAMXG00000019919	tnrc6a	100	58.259	Astyanax_mexicanus
ENSGAGG00000023209	TNRC6A	99	81.887	ENSBTAG00000017999	TNRC6A	93	81.081	Bos_taurus
ENSGAGG00000023209	TNRC6A	99	81.484	ENSCJAG00000020677	TNRC6A	89	81.196	Callithrix_jacchus
ENSGAGG00000023209	TNRC6A	99	82.346	ENSCAFG00000017531	TNRC6A	92	82.059	Canis_familiaris
ENSGAGG00000023209	TNRC6A	99	81.139	ENSCAFG00020021160	TNRC6A	93	80.794	Canis_lupus_dingo
ENSGAGG00000023209	TNRC6A	99	81.456	ENSCHIG00000019448	TNRC6A	97	81.167	Capra_hircus
ENSGAGG00000023209	TNRC6A	99	81.656	ENSTSYG00000012711	TNRC6A	90	81.369	Carlito_syrichta
ENSGAGG00000023209	TNRC6A	99	81.369	ENSCPOG00000036684	TNRC6A	91	81.081	Cavia_porcellus
ENSGAGG00000023209	TNRC6A	99	81.656	ENSCCAG00000033664	TNRC6A	90	81.369	Cebus_capucinus
ENSGAGG00000023209	TNRC6A	99	81.886	ENSCATG00000019284	TNRC6A	91	81.599	Cercocebus_atys
ENSGAGG00000023209	TNRC6A	99	78.621	ENSCLAG00000010217	TNRC6A	90	78.333	Chinchilla_lanigera
ENSGAGG00000023209	TNRC6A	99	79.586	ENSCSAG00000006561	TNRC6A	91	79.530	Chlorocebus_sabaeus
ENSGAGG00000023209	TNRC6A	94	75.829	ENSCHOG00000009374	TNRC6A	85	75.829	Choloepus_hoffmanni
ENSGAGG00000023209	TNRC6A	100	97.507	ENSCPBG00000001881	TNRC6A	100	97.507	Chrysemys_picta_bellii
ENSGAGG00000023209	TNRC6A	99	81.886	ENSCANG00000041549	TNRC6A	90	81.599	Colobus_angolensis_palliatus
ENSGAGG00000023209	TNRC6A	99	80.564	ENSCGRG00001015021	Tnrc6a	91	80.391	Cricetulus_griseus_chok1gshd
ENSGAGG00000023209	TNRC6A	99	80.161	ENSCGRG00000013351	Tnrc6a	91	79.988	Cricetulus_griseus_crigri
ENSGAGG00000023209	TNRC6A	100	59.910	ENSDARG00000079688	tnrc6a	100	59.496	Danio_rerio
ENSGAGG00000023209	TNRC6A	99	78.643	ENSDNOG00000013989	TNRC6A	92	78.419	Dasypus_novemcinctus
ENSGAGG00000023209	TNRC6A	99	72.539	ENSETEG00000014658	TNRC6A	92	72.539	Echinops_telfairi
ENSGAGG00000023209	TNRC6A	99	81.379	ENSEASG00005017693	TNRC6A	97	79.169	Equus_asinus_asinus
ENSGAGG00000023209	TNRC6A	99	81.379	ENSECAG00000025056	TNRC6A	97	79.169	Equus_caballus
ENSGAGG00000023209	TNRC6A	99	73.672	ENSEEUG00000004530	TNRC6A	92	73.672	Erinaceus_europaeus
ENSGAGG00000023209	TNRC6A	99	81.552	ENSFCAG00000025236	TNRC6A	90	81.264	Felis_catus
ENSGAGG00000023209	TNRC6A	100	88.613	ENSFALG00000003757	TNRC6A	91	88.557	Ficedula_albicollis
ENSGAGG00000023209	TNRC6A	100	93.283	ENSGALG00000006068	TNRC6A	100	93.109	Gallus_gallus
ENSGAGG00000023209	TNRC6A	99	81.886	ENSGGOG00000005137	TNRC6A	91	81.599	Gorilla_gorilla
ENSGAGG00000023209	TNRC6A	99	80.150	ENSHGLG00000012474	-	91	79.804	Heterocephalus_glaber_female
ENSGAGG00000023209	TNRC6A	99	63.731	ENSHGLG00000007368	-	89	63.249	Heterocephalus_glaber_female
ENSGAGG00000023209	TNRC6A	99	80.046	ENSHGLG00100012496	-	92	79.700	Heterocephalus_glaber_male
ENSGAGG00000023209	TNRC6A	99	79.854	ENSSTOG00000023394	TNRC6A	89	79.797	Ictidomys_tridecemlineatus
ENSGAGG00000023209	TNRC6A	99	72.622	ENSLACG00000006277	TNRC6A	95	72.400	Latimeria_chalumnae
ENSGAGG00000023209	TNRC6A	100	85.242	ENSLOCG00000005517	tnrc6a	85	85.242	Lepisosteus_oculatus
ENSGAGG00000023209	TNRC6A	99	81.207	ENSLAFG00000004209	TNRC6A	93	81.092	Loxodonta_africana
ENSGAGG00000023209	TNRC6A	99	79.127	ENSMFAG00000003824	TNRC6A	92	79.015	Macaca_fascicularis
ENSGAGG00000023209	TNRC6A	99	82.001	ENSMMUG00000020428	TNRC6A	90	81.714	Macaca_mulatta
ENSGAGG00000023209	TNRC6A	99	81.944	ENSMNEG00000034854	TNRC6A	90	81.656	Macaca_nemestrina
ENSGAGG00000023209	TNRC6A	99	78.959	ENSMLEG00000042737	TNRC6A	90	78.847	Mandrillus_leucophaeus
ENSGAGG00000023209	TNRC6A	99	89.063	ENSMGAG00000006455	TNRC6A	90	89.119	Meleagris_gallopavo
ENSGAGG00000023209	TNRC6A	99	80.621	ENSMAUG00000012750	Tnrc6a	91	80.449	Mesocricetus_auratus
ENSGAGG00000023209	TNRC6A	99	81.944	ENSMICG00000030685	TNRC6A	90	81.656	Microcebus_murinus
ENSGAGG00000023209	TNRC6A	99	80.619	ENSMOCG00000000152	Tnrc6a	91	80.275	Microtus_ochrogaster
ENSGAGG00000023209	TNRC6A	100	82.835	ENSMODG00000016348	TNRC6A	90	82.946	Monodelphis_domestica
ENSGAGG00000023209	TNRC6A	99	79.977	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	78.526	Mus_caroli
ENSGAGG00000023209	TNRC6A	99	80.495	ENSMUSG00000052707	Tnrc6a	99	78.880	Mus_musculus
ENSGAGG00000023209	TNRC6A	99	80.334	MGP_PahariEiJ_G0013635	Tnrc6a	100	78.951	Mus_pahari
ENSGAGG00000023209	TNRC6A	99	78.232	MGP_SPRETEiJ_G0031539	Tnrc6a	100	78.809	Mus_spretus
ENSGAGG00000023209	TNRC6A	99	74.650	ENSMPUG00000012324	TNRC6A	93	74.184	Mustela_putorius_furo
ENSGAGG00000023209	TNRC6A	99	77.181	ENSMLUG00000002701	TNRC6A	94	77.125	Myotis_lucifugus
ENSGAGG00000023209	TNRC6A	99	80.805	ENSNGAG00000020702	Tnrc6a	91	80.517	Nannospalax_galili
ENSGAGG00000023209	TNRC6A	99	80.654	ENSNLEG00000011851	TNRC6A	92	80.310	Nomascus_leucogenys
ENSGAGG00000023209	TNRC6A	74	82.838	ENSMEUG00000015959	-	68	82.838	Notamacropus_eugenii
ENSGAGG00000023209	TNRC6A	95	93.284	ENSOPRG00000005819	TNRC6A	86	93.284	Ochotona_princeps
ENSGAGG00000023209	TNRC6A	99	77.714	ENSODEG00000012802	TNRC6A	91	78.059	Octodon_degus
ENSGAGG00000023209	TNRC6A	96	83.023	ENSOANG00000007672	TNRC6A	100	83.081	Ornithorhynchus_anatinus
ENSGAGG00000023209	TNRC6A	99	77.629	ENSOCUG00000004325	TNRC6A	94	77.349	Oryctolagus_cuniculus
ENSGAGG00000023209	TNRC6A	99	79.721	ENSOGAG00000006666	TNRC6A	92	79.665	Otolemur_garnettii
ENSGAGG00000023209	TNRC6A	99	81.802	ENSOARG00000017950	TNRC6A	98	81.514	Ovis_aries
ENSGAGG00000023209	TNRC6A	99	81.886	ENSPPAG00000028379	TNRC6A	90	81.599	Pan_paniscus
ENSGAGG00000023209	TNRC6A	99	81.609	ENSPPRG00000005861	TNRC6A	90	81.322	Panthera_pardus
ENSGAGG00000023209	TNRC6A	99	81.667	ENSPTIG00000006346	TNRC6A	90	81.379	Panthera_tigris_altaica
ENSGAGG00000023209	TNRC6A	99	79.698	ENSPTRG00000007898	TNRC6A	92	79.642	Pan_troglodytes
ENSGAGG00000023209	TNRC6A	99	79.241	ENSPANG00000018523	TNRC6A	90	78.953	Papio_anubis
ENSGAGG00000023209	TNRC6A	96	78.325	ENSPKIG00000012859	tnrc6a	100	78.325	Paramormyrops_kingsleyae
ENSGAGG00000023209	TNRC6A	85	90.389	ENSPSIG00000003965	TNRC6A	100	90.389	Pelodiscus_sinensis
ENSGAGG00000023209	TNRC6A	99	80.714	ENSPEMG00000016318	Tnrc6a	91	80.368	Peromyscus_maniculatus_bairdii
ENSGAGG00000023209	TNRC6A	100	86.828	ENSPCIG00000012106	TNRC6A	94	86.886	Phascolarctos_cinereus
ENSGAGG00000023209	TNRC6A	99	79.195	ENSPPYG00000007202	TNRC6A	90	79.139	Pongo_abelii
ENSGAGG00000023209	TNRC6A	94	87.629	ENSPCAG00000008260	TNRC6A	85	87.629	Procavia_capensis
ENSGAGG00000023209	TNRC6A	99	79.643	ENSPCOG00000010134	TNRC6A	90	79.356	Propithecus_coquereli
ENSGAGG00000023209	TNRC6A	88	62.278	ENSPVAG00000012066	TNRC6A	90	62.595	Pteropus_vampyrus
ENSGAGG00000023209	TNRC6A	99	80.506	ENSRNOG00000024737	Tnrc6a	90	80.161	Rattus_norvegicus
ENSGAGG00000023209	TNRC6A	99	81.771	ENSRBIG00000014222	TNRC6A	92	81.484	Rhinopithecus_bieti
ENSGAGG00000023209	TNRC6A	99	79.586	ENSRROG00000032360	TNRC6A	91	79.306	Rhinopithecus_roxellana
ENSGAGG00000023209	TNRC6A	99	79.251	ENSSBOG00000036197	TNRC6A	100	79.965	Saimiri_boliviensis_boliviensis
ENSGAGG00000023209	TNRC6A	100	85.373	ENSSHAG00000008811	TNRC6A	100	85.544	Sarcophilus_harrisii
ENSGAGG00000023209	TNRC6A	100	60.773	ENSSFOG00015008920	tnrc6a	96	83.223	Scleropages_formosus
ENSGAGG00000023209	TNRC6A	70	64.494	ENSSARG00000002479	TNRC6A	80	64.930	Sorex_araneus
ENSGAGG00000023209	TNRC6A	99	86.129	ENSSPUG00000010525	TNRC6A	100	86.245	Sphenodon_punctatus
ENSGAGG00000023209	TNRC6A	99	82.928	ENSSSCG00000038870	TNRC6A	100	82.736	Sus_scrofa
ENSGAGG00000023209	TNRC6A	99	89.486	ENSTGUG00000006142	TNRC6A	92	89.486	Taeniopygia_guttata
ENSGAGG00000023209	TNRC6A	99	76.957	ENSTBEG00000014965	TNRC6A	93	76.902	Tupaia_belangeri
ENSGAGG00000023209	TNRC6A	92	81.672	ENSTTRG00000002008	TNRC6A	83	81.672	Tursiops_truncatus
ENSGAGG00000023209	TNRC6A	79	78.788	ENSUAMG00000006656	-	85	78.427	Ursus_americanus
ENSGAGG00000023209	TNRC6A	99	79.698	ENSUMAG00000008274	TNRC6A	100	82.742	Ursus_maritimus
ENSGAGG00000023209	TNRC6A	95	92.973	ENSVVUG00000005380	TNRC6A	97	79.663	Vulpes_vulpes
ENSGAGG00000023209	TNRC6A	99	67.093	ENSXETG00000030437	TNRC6A	96	65.836	Xenopus_tropicalis