EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000023306 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 17246 bases
Position: chrPPEB01004984.1:108173-125418
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000032589	RTC	PF01137.21	3.6e-67	1	1
ENSGAGP00000032588	RTC	PF01137.21	7.5e-66	1	1
ENSGAGP00000032589	RTC_insert	PF05189.13	3.9e-24	1	1
ENSGAGP00000032588	RTC_insert	PF05189.13	4.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000036938	RTCA-201	1366	-	ENSGAGP00000032588	323 (aa)	-	-
ENSGAGT00000036939	RTCA-202	881	-	ENSGAGP00000032589	293 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000023306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000023306's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000023306	RTCA	100	84.983	ENSG00000137996	RTCA	100	83.673	Homo_sapiens
ENSGAGG00000023306	RTCA	100	67.918	ENSAPOG00000001345	rtca	80	67.918	Acanthochromis_polyacanthus
ENSGAGG00000023306	RTCA	67	83.163	ENSAMEG00000008855	RTCA	73	83.163	Ailuropoda_melanoleuca
ENSGAGG00000023306	RTCA	100	67.235	ENSACIG00000019643	rtca	80	67.235	Amphilophus_citrinellus
ENSGAGG00000023306	RTCA	100	68.601	ENSAOCG00000014979	rtca	80	68.601	Amphiprion_ocellaris
ENSGAGG00000023306	RTCA	100	68.601	ENSAPEG00000006945	rtca	80	68.601	Amphiprion_percula
ENSGAGG00000023306	RTCA	100	65.870	ENSATEG00000006315	rtca	80	65.870	Anabas_testudineus
ENSGAGG00000023306	RTCA	95	85.053	ENSAPLG00000015430	RTCA	80	85.053	Anas_platyrhynchos
ENSGAGG00000023306	RTCA	57	87.952	ENSACAG00000003290	RTCA	94	87.952	Anolis_carolinensis
ENSGAGG00000023306	RTCA	100	82.935	ENSANAG00000025446	RTCA	80	82.935	Aotus_nancymaae
ENSGAGG00000023306	RTCA	100	66.212	ENSACLG00000020770	rtca	80	66.212	Astatotilapia_calliptera
ENSGAGG00000023306	RTCA	98	70.035	ENSAMXG00000043271	rtca	79	70.035	Astyanax_mexicanus
ENSGAGG00000023306	RTCA	100	85.666	ENSBTAG00000006321	RTCA	80	85.666	Bos_taurus
ENSGAGG00000023306	RTCA	100	83.276	ENSCJAG00000003398	RTCA	89	83.276	Callithrix_jacchus
ENSGAGG00000023306	RTCA	100	84.983	ENSCAFG00000020010	RTCA	54	84.983	Canis_familiaris
ENSGAGG00000023306	RTCA	100	85.666	ENSCHIG00000018937	RTCA	80	85.666	Capra_hircus
ENSGAGG00000023306	RTCA	100	83.618	ENSTSYG00000011305	RTCA	80	83.618	Carlito_syrichta
ENSGAGG00000023306	RTCA	100	83.618	ENSCCAG00000021844	RTCA	87	83.618	Cebus_capucinus
ENSGAGG00000023306	RTCA	100	80.392	ENSCATG00000019364	RTCA	81	80.392	Cercocebus_atys
ENSGAGG00000023306	RTCA	83	84.426	ENSCLAG00000006125	RTCA	77	84.426	Chinchilla_lanigera
ENSGAGG00000023306	RTCA	100	84.300	ENSCSAG00000001509	RTCA	80	84.300	Chlorocebus_sabaeus
ENSGAGG00000023306	RTCA	100	84.983	ENSCHOG00000005211	RTCA	80	84.983	Choloepus_hoffmanni
ENSGAGG00000023306	RTCA	100	98.635	ENSCPBG00000026658	RTCA	85	98.635	Chrysemys_picta_bellii
ENSGAGG00000023306	RTCA	99	52.740	ENSCING00000007875	-	80	52.740	Ciona_intestinalis
ENSGAGG00000023306	RTCA	99	52.397	ENSCSAVG00000007269	-	80	52.397	Ciona_savignyi
ENSGAGG00000023306	RTCA	100	83.959	ENSCANG00000040106	RTCA	80	83.959	Colobus_angolensis_palliatus
ENSGAGG00000023306	RTCA	67	83.673	ENSCGRG00001013163	Rtca	62	83.673	Cricetulus_griseus_chok1gshd
ENSGAGG00000023306	RTCA	98	66.899	ENSCSEG00000000530	rtca	83	66.234	Cynoglossus_semilaevis
ENSGAGG00000023306	RTCA	100	52.365	ENSCVAG00000021809	rtca	79	52.365	Cyprinodon_variegatus
ENSGAGG00000023306	RTCA	100	69.283	ENSDARG00000002215	rtca	80	69.283	Danio_rerio
ENSGAGG00000023306	RTCA	100	83.276	ENSDNOG00000000456	RTCA	80	83.276	Dasypus_novemcinctus
ENSGAGG00000023306	RTCA	100	83.276	ENSDORG00000005448	Rtca	80	83.276	Dipodomys_ordii
ENSGAGG00000023306	RTCA	100	37.755	FBgn0025630	Rtca	81	37.755	Drosophila_melanogaster
ENSGAGG00000023306	RTCA	98	52.414	ENSEBUG00000008556	rtca	77	52.414	Eptatretus_burgeri
ENSGAGG00000023306	RTCA	100	84.642	ENSEASG00005015926	RTCA	80	84.642	Equus_asinus_asinus
ENSGAGG00000023306	RTCA	100	84.642	ENSECAG00000019831	RTCA	80	84.642	Equus_caballus
ENSGAGG00000023306	RTCA	100	72.222	ENSEEUG00000001165	RTCA	88	72.222	Erinaceus_europaeus
ENSGAGG00000023306	RTCA	98	67.361	ENSELUG00000003741	rtca	79	67.361	Esox_lucius
ENSGAGG00000023306	RTCA	100	84.983	ENSFCAG00000024460	RTCA	80	84.983	Felis_catus
ENSGAGG00000023306	RTCA	100	90.102	ENSFALG00000002443	RTCA	79	90.102	Ficedula_albicollis
ENSGAGG00000023306	RTCA	96	67.254	ENSFDAG00000016084	-	80	67.254	Fukomys_damarensis
ENSGAGG00000023306	RTCA	100	83.959	ENSFDAG00000012070	-	80	83.959	Fukomys_damarensis
ENSGAGG00000023306	RTCA	53	67.742	ENSFHEG00000002868	rtca	67	67.742	Fundulus_heteroclitus
ENSGAGG00000023306	RTCA	100	66.894	ENSGMOG00000013264	rtca	80	66.894	Gadus_morhua
ENSGAGG00000023306	RTCA	100	90.102	ENSGALG00000005277	RTCA	80	90.102	Gallus_gallus
ENSGAGG00000023306	RTCA	100	67.235	ENSGAFG00000011853	rtca	80	67.235	Gambusia_affinis
ENSGAGG00000023306	RTCA	100	66.894	ENSGACG00000013497	rtca	80	66.894	Gasterosteus_aculeatus
ENSGAGG00000023306	RTCA	100	83.618	ENSGGOG00000044018	-	80	83.618	Gorilla_gorilla
ENSGAGG00000023306	RTCA	100	84.642	ENSGGOG00000009546	-	80	84.642	Gorilla_gorilla
ENSGAGG00000023306	RTCA	100	66.212	ENSHBUG00000002114	rtca	80	66.212	Haplochromis_burtoni
ENSGAGG00000023306	RTCA	100	82.935	ENSHGLG00000002617	RTCA	80	82.935	Heterocephalus_glaber_female
ENSGAGG00000023306	RTCA	100	82.935	ENSHGLG00100006056	RTCA	80	82.935	Heterocephalus_glaber_male
ENSGAGG00000023306	RTCA	100	64.164	ENSHCOG00000020628	rtca	72	64.164	Hippocampus_comes
ENSGAGG00000023306	RTCA	100	69.625	ENSIPUG00000024803	rtca	80	69.625	Ictalurus_punctatus
ENSGAGG00000023306	RTCA	100	70.748	ENSSTOG00000033099	-	79	70.748	Ictidomys_tridecemlineatus
ENSGAGG00000023306	RTCA	100	75.427	ENSSTOG00000013528	-	72	83.265	Ictidomys_tridecemlineatus
ENSGAGG00000023306	RTCA	100	56.655	ENSJJAG00000016178	Rtca	75	56.655	Jaculus_jaculus
ENSGAGG00000023306	RTCA	100	68.942	ENSKMAG00000006651	rtca	80	68.942	Kryptolebias_marmoratus
ENSGAGG00000023306	RTCA	85	66.129	ENSLBEG00000002448	-	77	66.129	Labrus_bergylta
ENSGAGG00000023306	RTCA	98	67.014	ENSLBEG00000028971	rtca	79	67.014	Labrus_bergylta
ENSGAGG00000023306	RTCA	100	73.720	ENSLACG00000013666	RTCA	80	73.720	Latimeria_chalumnae
ENSGAGG00000023306	RTCA	100	69.283	ENSLOCG00000000093	rtca	80	69.283	Lepisosteus_oculatus
ENSGAGG00000023306	RTCA	100	84.983	ENSLAFG00000001473	RTCA	80	84.983	Loxodonta_africana
ENSGAGG00000023306	RTCA	100	84.300	ENSMFAG00000034132	RTCA	80	84.300	Macaca_fascicularis
ENSGAGG00000023306	RTCA	100	83.618	ENSMMUG00000019105	RTCA	80	83.618	Macaca_mulatta
ENSGAGG00000023306	RTCA	81	83.898	ENSMNEG00000037163	RTCA	76	83.898	Macaca_nemestrina
ENSGAGG00000023306	RTCA	100	75.427	ENSMLEG00000042151	RTCA	87	75.427	Mandrillus_leucophaeus
ENSGAGG00000023306	RTCA	100	69.625	ENSMAMG00000016536	rtca	80	69.625	Mastacembelus_armatus
ENSGAGG00000023306	RTCA	100	66.212	ENSMZEG00005017945	rtca	80	66.212	Maylandia_zebra
ENSGAGG00000023306	RTCA	84	87.398	ENSMGAG00000006892	RTCA	77	87.398	Meleagris_gallopavo
ENSGAGG00000023306	RTCA	100	83.618	ENSMAUG00000008488	Rtca	80	83.618	Mesocricetus_auratus
ENSGAGG00000023306	RTCA	81	83.898	ENSMICG00000008643	RTCA	76	83.898	Microcebus_murinus
ENSGAGG00000023306	RTCA	100	83.618	ENSMOCG00000016660	Rtca	80	83.618	Microtus_ochrogaster
ENSGAGG00000023306	RTCA	81	68.644	ENSMMOG00000007750	rtca	77	68.644	Mola_mola
ENSGAGG00000023306	RTCA	100	85.324	ENSMODG00000003557	RTCA	80	85.324	Monodelphis_domestica
ENSGAGG00000023306	RTCA	100	68.942	ENSMALG00000020844	rtca	80	68.942	Monopterus_albus
ENSGAGG00000023306	RTCA	100	83.276	MGP_CAROLIEiJ_G0025565	Rtca	100	82.394	Mus_caroli
ENSGAGG00000023306	RTCA	100	83.276	ENSMUSG00000000339	Rtca	100	82.394	Mus_musculus
ENSGAGG00000023306	RTCA	100	82.935	MGP_PahariEiJ_G0027011	Rtca	100	81.690	Mus_pahari
ENSGAGG00000023306	RTCA	100	82.935	MGP_SPRETEiJ_G0026515	Rtca	100	81.690	Mus_spretus
ENSGAGG00000023306	RTCA	100	84.642	ENSMPUG00000012119	RTCA	80	84.642	Mustela_putorius_furo
ENSGAGG00000023306	RTCA	100	79.592	ENSMLUG00000009922	RTCA	80	79.592	Myotis_lucifugus
ENSGAGG00000023306	RTCA	100	82.253	ENSNGAG00000011540	Rtca	80	82.253	Nannospalax_galili
ENSGAGG00000023306	RTCA	100	66.212	ENSNBRG00000003062	rtca	80	66.212	Neolamprologus_brichardi
ENSGAGG00000023306	RTCA	100	84.642	ENSNLEG00000031426	RTCA	80	84.642	Nomascus_leucogenys
ENSGAGG00000023306	RTCA	61	82.927	ENSMEUG00000010030	-	68	60.618	Notamacropus_eugenii
ENSGAGG00000023306	RTCA	65	85.185	ENSOPRG00000012092	RTCA	50	85.185	Ochotona_princeps
ENSGAGG00000023306	RTCA	94	85.455	ENSODEG00000006990	RTCA	77	85.305	Octodon_degus
ENSGAGG00000023306	RTCA	100	66.553	ENSONIG00000007753	rtca	80	66.553	Oreochromis_niloticus
ENSGAGG00000023306	RTCA	83	83.197	ENSOANG00000012055	RTCA	75	83.197	Ornithorhynchus_anatinus
ENSGAGG00000023306	RTCA	100	84.983	ENSOCUG00000014247	RTCA	80	84.983	Oryctolagus_cuniculus
ENSGAGG00000023306	RTCA	100	67.918	ENSORLG00000013605	rtca	85	67.918	Oryzias_latipes
ENSGAGG00000023306	RTCA	100	67.918	ENSORLG00020001904	rtca	83	67.918	Oryzias_latipes_hni
ENSGAGG00000023306	RTCA	100	67.577	ENSORLG00015021064	rtca	80	67.577	Oryzias_latipes_hsok
ENSGAGG00000023306	RTCA	100	69.625	ENSOMEG00000000756	rtca	80	69.625	Oryzias_melastigma
ENSGAGG00000023306	RTCA	100	72.696	ENSOGAG00000005627	RTCA	80	72.696	Otolemur_garnettii
ENSGAGG00000023306	RTCA	84	85.306	ENSOARG00000018122	RTCA	77	85.306	Ovis_aries
ENSGAGG00000023306	RTCA	100	81.046	ENSPPAG00000035119	RTCA	81	81.046	Pan_paniscus
ENSGAGG00000023306	RTCA	100	84.642	ENSPPRG00000000350	RTCA	80	84.642	Panthera_pardus
ENSGAGG00000023306	RTCA	100	84.642	ENSPTIG00000012816	RTCA	80	84.642	Panthera_tigris_altaica
ENSGAGG00000023306	RTCA	100	80.719	ENSPTRG00000001004	RTCA	81	80.719	Pan_troglodytes
ENSGAGG00000023306	RTCA	100	84.300	ENSPANG00000000346	RTCA	80	84.300	Papio_anubis
ENSGAGG00000023306	RTCA	100	70.307	ENSPKIG00000001653	rtca	80	70.307	Paramormyrops_kingsleyae
ENSGAGG00000023306	RTCA	100	95.904	ENSPSIG00000011408	RTCA	80	95.904	Pelodiscus_sinensis
ENSGAGG00000023306	RTCA	50	61.438	ENSPMGG00000022529	rtca	97	61.438	Periophthalmus_magnuspinnatus
ENSGAGG00000023306	RTCA	100	82.935	ENSPEMG00000018582	Rtca	80	82.935	Peromyscus_maniculatus_bairdii
ENSGAGG00000023306	RTCA	99	59.794	ENSPMAG00000009110	rtca	80	59.794	Petromyzon_marinus
ENSGAGG00000023306	RTCA	100	86.007	ENSPCIG00000007684	RTCA	80	86.007	Phascolarctos_cinereus
ENSGAGG00000023306	RTCA	100	67.687	ENSPFOG00000004824	rtca	80	67.687	Poecilia_formosa
ENSGAGG00000023306	RTCA	100	67.918	ENSPLAG00000011753	rtca	80	67.918	Poecilia_latipinna
ENSGAGG00000023306	RTCA	100	67.918	ENSPMEG00000020469	rtca	80	67.918	Poecilia_mexicana
ENSGAGG00000023306	RTCA	100	68.601	ENSPREG00000001365	rtca	80	68.601	Poecilia_reticulata
ENSGAGG00000023306	RTCA	100	84.300	ENSPPYG00000001115	RTCA	80	84.300	Pongo_abelii
ENSGAGG00000023306	RTCA	97	85.563	ENSPCAG00000005076	RTCA	78	85.563	Procavia_capensis
ENSGAGG00000023306	RTCA	100	84.642	ENSPCOG00000005603	RTCA	92	85.417	Propithecus_coquereli
ENSGAGG00000023306	RTCA	100	80.065	ENSPVAG00000009478	RTCA	81	80.065	Pteropus_vampyrus
ENSGAGG00000023306	RTCA	100	66.212	ENSPNYG00000004722	rtca	80	66.212	Pundamilia_nyererei
ENSGAGG00000023306	RTCA	100	69.625	ENSPNAG00000022270	rtca	80	69.625	Pygocentrus_nattereri
ENSGAGG00000023306	RTCA	100	83.618	ENSRNOG00000014575	Rtca	80	83.618	Rattus_norvegicus
ENSGAGG00000023306	RTCA	100	80.065	ENSRBIG00000041180	RTCA	81	80.065	Rhinopithecus_bieti
ENSGAGG00000023306	RTCA	100	83.618	ENSRROG00000024929	RTCA	80	83.618	Rhinopithecus_roxellana
ENSGAGG00000023306	RTCA	100	83.276	ENSSBOG00000028626	RTCA	80	83.276	Saimiri_boliviensis_boliviensis
ENSGAGG00000023306	RTCA	100	87.031	ENSSHAG00000001758	RTCA	80	87.031	Sarcophilus_harrisii
ENSGAGG00000023306	RTCA	98	66.551	ENSSMAG00000014680	rtca	77	66.551	Scophthalmus_maximus
ENSGAGG00000023306	RTCA	98	68.990	ENSSDUG00000015585	rtca	77	68.990	Seriola_dumerili
ENSGAGG00000023306	RTCA	95	68.705	ENSSLDG00000018985	rtca	76	68.459	Seriola_lalandi_dorsalis
ENSGAGG00000023306	RTCA	83	79.508	ENSSARG00000013993	RTCA	77	79.508	Sorex_araneus
ENSGAGG00000023306	RTCA	100	67.235	ENSSPAG00000011938	rtca	80	67.235	Stegastes_partitus
ENSGAGG00000023306	RTCA	100	85.324	ENSSSCG00000006865	RTCA	80	85.324	Sus_scrofa
ENSGAGG00000023306	RTCA	100	90.444	ENSTGUG00000005154	RTCA	80	90.444	Taeniopygia_guttata
ENSGAGG00000023306	RTCA	100	67.577	ENSTRUG00000008799	rtca	80	67.577	Takifugu_rubripes
ENSGAGG00000023306	RTCA	51	66.892	ENSTRUG00000002431	-	95	66.892	Takifugu_rubripes
ENSGAGG00000023306	RTCA	100	67.235	ENSTNIG00000004725	rtca	80	67.235	Tetraodon_nigroviridis
ENSGAGG00000023306	RTCA	100	79.739	ENSTTRG00000015327	RTCA	81	79.739	Tursiops_truncatus
ENSGAGG00000023306	RTCA	100	84.300	ENSUAMG00000017265	RTCA	82	84.300	Ursus_americanus
ENSGAGG00000023306	RTCA	100	84.300	ENSUMAG00000007881	RTCA	80	84.300	Ursus_maritimus
ENSGAGG00000023306	RTCA	74	84.332	ENSVPAG00000001039	RTCA	57	84.332	Vicugna_pacos
ENSGAGG00000023306	RTCA	100	84.642	ENSVVUG00000022041	RTCA	58	84.642	Vulpes_vulpes
ENSGAGG00000023306	RTCA	99	62.162	ENSXETG00000031661	RTCA	81	62.162	Xenopus_tropicalis
ENSGAGG00000023306	RTCA	84	66.397	ENSXCOG00000008002	rtca	72	66.397	Xiphophorus_couchianus
ENSGAGG00000023306	RTCA	100	67.577	ENSXMAG00000005482	rtca	80	67.577	Xiphophorus_maculatus