EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000023477 (Gene tree)
Gene ID: -
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 66351 bases
Position: chrPPEB01001066.1:29370-95720
Accession: 26114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000032861	FDF	PF09532.10	7.8e-15	1	1
ENSGAGP00000032861	LSM14	PF12701.7	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000037247	EDC3-201	4635	-	ENSGAGP00000032861	506 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000023477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000023477's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000023477	EDC3	100	88.976	ENSG00000179151	EDC3	100	98.148	Homo_sapiens
ENSGAGG00000023477	EDC3	99	56.556	ENSAPOG00000008655	EDC3	99	56.556	Acanthochromis_polyacanthus
ENSGAGG00000023477	EDC3	100	70.866	ENSAPOG00000010791	edc3	100	70.866	Acanthochromis_polyacanthus
ENSGAGG00000023477	EDC3	100	88.780	ENSAMEG00000008963	EDC3	100	88.780	Ailuropoda_melanoleuca
ENSGAGG00000023477	EDC3	99	59.844	ENSACIG00000005330	EDC3	99	59.844	Amphilophus_citrinellus
ENSGAGG00000023477	EDC3	100	69.231	ENSACIG00000017751	edc3	100	69.231	Amphilophus_citrinellus
ENSGAGG00000023477	EDC3	100	70.866	ENSAOCG00000005431	edc3	100	70.866	Amphiprion_ocellaris
ENSGAGG00000023477	EDC3	99	58.904	ENSAOCG00000009103	-	99	58.904	Amphiprion_ocellaris
ENSGAGG00000023477	EDC3	99	58.904	ENSAPEG00000007841	EDC3	99	58.904	Amphiprion_percula
ENSGAGG00000023477	EDC3	100	70.866	ENSAPEG00000000968	edc3	100	70.866	Amphiprion_percula
ENSGAGG00000023477	EDC3	100	71.203	ENSATEG00000015505	edc3	100	71.203	Anabas_testudineus
ENSGAGG00000023477	EDC3	100	58.301	ENSATEG00000004205	-	100	58.301	Anabas_testudineus
ENSGAGG00000023477	EDC3	90	93.172	ENSAPLG00000008957	EDC3	100	93.172	Anas_platyrhynchos
ENSGAGG00000023477	EDC3	78	88.354	ENSACAG00000000460	-	100	88.354	Anolis_carolinensis
ENSGAGG00000023477	EDC3	100	88.976	ENSANAG00000024078	EDC3	100	88.976	Aotus_nancymaae
ENSGAGG00000023477	EDC3	100	69.231	ENSACLG00000007232	edc3	100	69.231	Astatotilapia_calliptera
ENSGAGG00000023477	EDC3	99	59.020	ENSACLG00000018776	-	99	59.020	Astatotilapia_calliptera
ENSGAGG00000023477	EDC3	100	71.260	ENSAMXG00000001589	edc3	100	71.260	Astyanax_mexicanus
ENSGAGG00000023477	EDC3	100	88.780	ENSBTAG00000007308	EDC3	100	88.780	Bos_taurus
ENSGAGG00000023477	EDC3	100	88.780	ENSCJAG00000017681	EDC3	100	88.780	Callithrix_jacchus
ENSGAGG00000023477	EDC3	100	88.189	ENSCAFG00000017935	EDC3	100	88.189	Canis_familiaris
ENSGAGG00000023477	EDC3	100	88.189	ENSCAFG00020003909	EDC3	100	88.189	Canis_lupus_dingo
ENSGAGG00000023477	EDC3	100	88.976	ENSCHIG00000023658	EDC3	100	88.976	Capra_hircus
ENSGAGG00000023477	EDC3	100	89.370	ENSTSYG00000004822	EDC3	100	89.370	Carlito_syrichta
ENSGAGG00000023477	EDC3	100	87.795	ENSCPOG00000015595	EDC3	100	87.795	Cavia_porcellus
ENSGAGG00000023477	EDC3	100	88.976	ENSCCAG00000021663	EDC3	100	88.976	Cebus_capucinus
ENSGAGG00000023477	EDC3	100	88.976	ENSCATG00000037511	EDC3	100	88.976	Cercocebus_atys
ENSGAGG00000023477	EDC3	100	87.598	ENSCLAG00000005700	EDC3	100	87.598	Chinchilla_lanigera
ENSGAGG00000023477	EDC3	100	88.976	ENSCSAG00000014239	EDC3	100	88.976	Chlorocebus_sabaeus
ENSGAGG00000023477	EDC3	100	99.016	ENSCPBG00000024239	EDC3	100	99.016	Chrysemys_picta_bellii
ENSGAGG00000023477	EDC3	99	38.760	ENSCING00000022142	-	99	38.760	Ciona_intestinalis
ENSGAGG00000023477	EDC3	100	88.976	ENSCANG00000028699	EDC3	100	88.976	Colobus_angolensis_palliatus
ENSGAGG00000023477	EDC3	100	88.976	ENSCGRG00001013874	Edc3	100	88.976	Cricetulus_griseus_chok1gshd
ENSGAGG00000023477	EDC3	100	88.976	ENSCGRG00000011885	Edc3	100	88.976	Cricetulus_griseus_crigri
ENSGAGG00000023477	EDC3	99	71.146	ENSCSEG00000012996	edc3	99	71.146	Cynoglossus_semilaevis
ENSGAGG00000023477	EDC3	100	69.822	ENSCVAG00000008023	edc3	100	69.822	Cyprinodon_variegatus
ENSGAGG00000023477	EDC3	99	69.804	ENSDARG00000051931	edc3	99	69.804	Danio_rerio
ENSGAGG00000023477	EDC3	100	77.670	ENSDNOG00000030661	EDC3	100	77.670	Dasypus_novemcinctus
ENSGAGG00000023477	EDC3	64	96.296	ENSETEG00000002398	-	64	96.296	Echinops_telfairi
ENSGAGG00000023477	EDC3	100	88.780	ENSEASG00005005071	EDC3	100	88.780	Equus_asinus_asinus
ENSGAGG00000023477	EDC3	100	88.780	ENSECAG00000017994	EDC3	100	88.780	Equus_caballus
ENSGAGG00000023477	EDC3	100	62.573	ENSELUG00000007607	EDC3	100	62.573	Esox_lucius
ENSGAGG00000023477	EDC3	100	66.928	ENSELUG00000005794	edc3	100	66.928	Esox_lucius
ENSGAGG00000023477	EDC3	100	88.583	ENSFCAG00000002014	EDC3	100	88.583	Felis_catus
ENSGAGG00000023477	EDC3	98	88.554	ENSFALG00000004543	EDC3	96	88.554	Ficedula_albicollis
ENSGAGG00000023477	EDC3	100	87.402	ENSFDAG00000012582	EDC3	100	87.402	Fukomys_damarensis
ENSGAGG00000023477	EDC3	100	70.611	ENSFHEG00000009375	edc3	100	70.611	Fundulus_heteroclitus
ENSGAGG00000023477	EDC3	100	69.412	ENSGMOG00000002715	edc3	100	69.412	Gadus_morhua
ENSGAGG00000023477	EDC3	100	93.688	ENSGALG00000040181	EDC3	100	93.688	Gallus_gallus
ENSGAGG00000023477	EDC3	100	68.245	ENSGAFG00000014433	edc3	100	68.047	Gambusia_affinis
ENSGAGG00000023477	EDC3	99	55.969	ENSGACG00000014671	EDC3	99	56.360	Gasterosteus_aculeatus
ENSGAGG00000023477	EDC3	100	69.231	ENSGACG00000009783	edc3	100	69.231	Gasterosteus_aculeatus
ENSGAGG00000023477	EDC3	100	89.173	ENSGGOG00000003552	EDC3	100	89.173	Gorilla_gorilla
ENSGAGG00000023477	EDC3	100	69.231	ENSHBUG00000003635	edc3	100	69.231	Haplochromis_burtoni
ENSGAGG00000023477	EDC3	99	59.020	ENSHBUG00000020817	EDC3	99	59.020	Haplochromis_burtoni
ENSGAGG00000023477	EDC3	100	68.369	ENSHCOG00000016834	edc3	100	68.959	Hippocampus_comes
ENSGAGG00000023477	EDC3	99	70.059	ENSIPUG00000005695	edc3	100	70.254	Ictalurus_punctatus
ENSGAGG00000023477	EDC3	100	89.173	ENSSTOG00000013936	EDC3	100	89.173	Ictidomys_tridecemlineatus
ENSGAGG00000023477	EDC3	100	88.583	ENSJJAG00000008074	Edc3	100	88.583	Jaculus_jaculus
ENSGAGG00000023477	EDC3	100	70.217	ENSKMAG00000001243	edc3	100	70.217	Kryptolebias_marmoratus
ENSGAGG00000023477	EDC3	99	56.719	ENSKMAG00000001987	EDC3	99	56.719	Kryptolebias_marmoratus
ENSGAGG00000023477	EDC3	100	69.412	ENSLBEG00000013435	edc3	99	69.412	Labrus_bergylta
ENSGAGG00000023477	EDC3	99	58.140	ENSLBEG00000017984	EDC3	100	58.027	Labrus_bergylta
ENSGAGG00000023477	EDC3	100	79.223	ENSLACG00000014149	EDC3	100	79.223	Latimeria_chalumnae
ENSGAGG00000023477	EDC3	100	68.689	ENSLOCG00000014625	edc3	100	68.798	Lepisosteus_oculatus
ENSGAGG00000023477	EDC3	100	88.560	ENSLAFG00000002992	EDC3	100	88.560	Loxodonta_africana
ENSGAGG00000023477	EDC3	100	88.583	ENSMFAG00000043074	EDC3	100	88.583	Macaca_fascicularis
ENSGAGG00000023477	EDC3	100	88.583	ENSMMUG00000011071	EDC3	100	88.583	Macaca_mulatta
ENSGAGG00000023477	EDC3	100	88.583	ENSMNEG00000035316	EDC3	100	88.583	Macaca_nemestrina
ENSGAGG00000023477	EDC3	100	88.976	ENSMLEG00000030372	EDC3	100	88.976	Mandrillus_leucophaeus
ENSGAGG00000023477	EDC3	100	70.020	ENSMAMG00000000505	edc3	100	70.020	Mastacembelus_armatus
ENSGAGG00000023477	EDC3	100	57.812	ENSMAMG00000005423	-	100	57.812	Mastacembelus_armatus
ENSGAGG00000023477	EDC3	99	59.608	ENSMZEG00005005654	EDC3	99	59.608	Maylandia_zebra
ENSGAGG00000023477	EDC3	100	69.231	ENSMZEG00005004892	edc3	100	69.231	Maylandia_zebra
ENSGAGG00000023477	EDC3	100	93.097	ENSMGAG00000002617	EDC3	100	93.097	Meleagris_gallopavo
ENSGAGG00000023477	EDC3	100	88.976	ENSMICG00000043190	EDC3	100	88.976	Microcebus_murinus
ENSGAGG00000023477	EDC3	100	88.583	ENSMOCG00000016205	Edc3	100	88.583	Microtus_ochrogaster
ENSGAGG00000023477	EDC3	99	70.138	ENSMMOG00000012278	edc3	99	70.751	Mola_mola
ENSGAGG00000023477	EDC3	100	90.945	ENSMODG00000009442	EDC3	100	90.945	Monodelphis_domestica
ENSGAGG00000023477	EDC3	100	70.334	ENSMALG00000008658	edc3	100	70.334	Monopterus_albus
ENSGAGG00000023477	EDC3	100	87.598	MGP_CAROLIEiJ_G0032280	Edc3	100	96.923	Mus_caroli
ENSGAGG00000023477	EDC3	100	87.598	ENSMUSG00000038957	Edc3	100	96.923	Mus_musculus
ENSGAGG00000023477	EDC3	100	87.795	MGP_PahariEiJ_G0015146	Edc3	100	96.923	Mus_pahari
ENSGAGG00000023477	EDC3	100	87.795	MGP_SPRETEiJ_G0033420	Edc3	100	96.923	Mus_spretus
ENSGAGG00000023477	EDC3	100	89.370	ENSMPUG00000017293	EDC3	100	89.370	Mustela_putorius_furo
ENSGAGG00000023477	EDC3	100	88.039	ENSMLUG00000016382	EDC3	100	88.039	Myotis_lucifugus
ENSGAGG00000023477	EDC3	100	87.795	ENSNGAG00000010923	Edc3	100	87.795	Nannospalax_galili
ENSGAGG00000023477	EDC3	100	69.034	ENSNBRG00000002434	edc3	100	69.034	Neolamprologus_brichardi
ENSGAGG00000023477	EDC3	99	60.196	ENSNBRG00000007881	EDC3	99	60.196	Neolamprologus_brichardi
ENSGAGG00000023477	EDC3	100	79.331	ENSNLEG00000014577	EDC3	100	79.331	Nomascus_leucogenys
ENSGAGG00000023477	EDC3	100	90.533	ENSMEUG00000009077	EDC3	100	90.533	Notamacropus_eugenii
ENSGAGG00000023477	EDC3	79	98.148	ENSOPRG00000009540	-	79	98.148	Ochotona_princeps
ENSGAGG00000023477	EDC3	99	59.844	ENSONIG00000002932	-	99	60.234	Oreochromis_niloticus
ENSGAGG00000023477	EDC3	100	69.428	ENSONIG00000008434	edc3	100	69.428	Oreochromis_niloticus
ENSGAGG00000023477	EDC3	78	86.398	ENSOCUG00000017740	EDC3	86	86.398	Oryctolagus_cuniculus
ENSGAGG00000023477	EDC3	99	57.283	ENSORLG00000014399	-	98	57.283	Oryzias_latipes
ENSGAGG00000023477	EDC3	100	68.836	ENSORLG00000004883	edc3	100	68.836	Oryzias_latipes
ENSGAGG00000023477	EDC3	99	57.283	ENSORLG00020019446	-	99	57.283	Oryzias_latipes_hni
ENSGAGG00000023477	EDC3	100	69.231	ENSORLG00020012262	edc3	100	69.231	Oryzias_latipes_hni
ENSGAGG00000023477	EDC3	100	69.034	ENSORLG00015005634	edc3	100	69.034	Oryzias_latipes_hsok
ENSGAGG00000023477	EDC3	99	57.087	ENSORLG00015017635	-	95	57.087	Oryzias_latipes_hsok
ENSGAGG00000023477	EDC3	100	69.922	ENSOMEG00000014026	edc3	100	70.117	Oryzias_melastigma
ENSGAGG00000023477	EDC3	99	57.087	ENSOMEG00000017354	EDC3	99	57.087	Oryzias_melastigma
ENSGAGG00000023477	EDC3	100	88.583	ENSOGAG00000014441	EDC3	100	89.173	Otolemur_garnettii
ENSGAGG00000023477	EDC3	100	88.212	ENSOARG00000003476	EDC3	100	88.605	Ovis_aries
ENSGAGG00000023477	EDC3	100	89.173	ENSPPAG00000040143	EDC3	100	89.173	Pan_paniscus
ENSGAGG00000023477	EDC3	100	88.780	ENSPPRG00000006257	EDC3	100	88.780	Panthera_pardus
ENSGAGG00000023477	EDC3	100	88.780	ENSPTIG00000017424	EDC3	100	88.780	Panthera_tigris_altaica
ENSGAGG00000023477	EDC3	100	89.173	ENSPTRG00000007279	EDC3	100	89.173	Pan_troglodytes
ENSGAGG00000023477	EDC3	100	88.976	ENSPANG00000015997	EDC3	100	88.976	Papio_anubis
ENSGAGG00000023477	EDC3	100	68.824	ENSPKIG00000004416	edc3	100	69.804	Paramormyrops_kingsleyae
ENSGAGG00000023477	EDC3	99	66.798	ENSPKIG00000019810	EDC3	99	66.798	Paramormyrops_kingsleyae
ENSGAGG00000023477	EDC3	100	90.551	ENSPSIG00000008474	EDC3	96	95.726	Pelodiscus_sinensis
ENSGAGG00000023477	EDC3	100	67.780	ENSPMGG00000007223	edc3	100	67.780	Periophthalmus_magnuspinnatus
ENSGAGG00000023477	EDC3	100	88.780	ENSPEMG00000015260	Edc3	100	88.780	Peromyscus_maniculatus_bairdii
ENSGAGG00000023477	EDC3	100	90.335	ENSPCIG00000006276	EDC3	70	90.335	Phascolarctos_cinereus
ENSGAGG00000023477	EDC3	100	69.034	ENSPFOG00000012204	edc3	100	69.034	Poecilia_formosa
ENSGAGG00000023477	EDC3	100	69.034	ENSPLAG00000014420	edc3	100	69.034	Poecilia_latipinna
ENSGAGG00000023477	EDC3	100	69.034	ENSPMEG00000023289	edc3	100	69.034	Poecilia_mexicana
ENSGAGG00000023477	EDC3	100	69.034	ENSPREG00000016022	edc3	100	69.034	Poecilia_reticulata
ENSGAGG00000023477	EDC3	100	87.992	ENSPPYG00000006642	EDC3	100	87.992	Pongo_abelii
ENSGAGG00000023477	EDC3	88	98.148	ENSPCAG00000002802	EDC3	88	98.148	Procavia_capensis
ENSGAGG00000023477	EDC3	100	88.780	ENSPCOG00000013364	EDC3	100	88.780	Propithecus_coquereli
ENSGAGG00000023477	EDC3	100	88.189	ENSPVAG00000014733	EDC3	100	88.189	Pteropus_vampyrus
ENSGAGG00000023477	EDC3	100	69.231	ENSPNYG00000021797	edc3	100	69.231	Pundamilia_nyererei
ENSGAGG00000023477	EDC3	99	59.020	ENSPNYG00000009669	EDC3	99	59.020	Pundamilia_nyererei
ENSGAGG00000023477	EDC3	100	69.961	ENSPNAG00000019657	edc3	100	69.961	Pygocentrus_nattereri
ENSGAGG00000023477	EDC3	99	88.119	ENSRNOG00000019579	Edc3	99	88.713	Rattus_norvegicus
ENSGAGG00000023477	EDC3	100	88.780	ENSRBIG00000019488	EDC3	100	88.780	Rhinopithecus_bieti
ENSGAGG00000023477	EDC3	100	88.780	ENSRROG00000034959	EDC3	100	88.780	Rhinopithecus_roxellana
ENSGAGG00000023477	EDC3	100	89.173	ENSSBOG00000004896	EDC3	100	89.173	Saimiri_boliviensis_boliviensis
ENSGAGG00000023477	EDC3	96	89.959	ENSSHAG00000015075	EDC3	95	89.959	Sarcophilus_harrisii
ENSGAGG00000023477	EDC3	99	71.790	ENSSFOG00015016939	edc3	99	72.549	Scleropages_formosus
ENSGAGG00000023477	EDC3	100	65.234	ENSSFOG00015002439	edc3	100	64.844	Scleropages_formosus
ENSGAGG00000023477	EDC3	99	57.143	ENSSMAG00000010176	-	99	57.143	Scophthalmus_maximus
ENSGAGG00000023477	EDC3	100	71.006	ENSSMAG00000010695	edc3	100	71.006	Scophthalmus_maximus
ENSGAGG00000023477	EDC3	99	60.547	ENSSDUG00000007671	EDC3	99	60.547	Seriola_dumerili
ENSGAGG00000023477	EDC3	100	70.392	ENSSDUG00000021844	edc3	100	71.006	Seriola_dumerili
ENSGAGG00000023477	EDC3	100	70.392	ENSSLDG00000022046	edc3	100	71.006	Seriola_lalandi_dorsalis
ENSGAGG00000023477	EDC3	80	89.516	ENSSARG00000003907	EDC3	80	89.516	Sorex_araneus
ENSGAGG00000023477	EDC3	100	93.307	ENSSPUG00000008232	EDC3	100	93.307	Sphenodon_punctatus
ENSGAGG00000023477	EDC3	99	58.235	ENSSPAG00000020327	EDC3	99	58.235	Stegastes_partitus
ENSGAGG00000023477	EDC3	100	71.006	ENSSPAG00000010009	edc3	100	71.006	Stegastes_partitus
ENSGAGG00000023477	EDC3	100	88.189	ENSSSCG00000001903	EDC3	100	88.189	Sus_scrofa
ENSGAGG00000023477	EDC3	100	92.702	ENSTGUG00000004007	EDC3	100	92.702	Taeniopygia_guttata
ENSGAGG00000023477	EDC3	100	71.400	ENSTRUG00000017078	edc3	100	71.400	Takifugu_rubripes
ENSGAGG00000023477	EDC3	100	70.138	ENSTNIG00000016047	edc3	100	70.138	Tetraodon_nigroviridis
ENSGAGG00000023477	EDC3	100	88.189	ENSTTRG00000007990	EDC3	100	88.189	Tursiops_truncatus
ENSGAGG00000023477	EDC3	100	88.780	ENSUAMG00000026710	-	100	88.780	Ursus_americanus
ENSGAGG00000023477	EDC3	100	88.780	ENSUMAG00000005006	EDC3	96	88.780	Ursus_maritimus
ENSGAGG00000023477	EDC3	79	85.185	ENSVPAG00000003499	-	79	85.185	Vicugna_pacos
ENSGAGG00000023477	EDC3	100	88.189	ENSVVUG00000018601	EDC3	100	88.189	Vulpes_vulpes
ENSGAGG00000023477	EDC3	68	83.046	ENSXETG00000010622	edc3	99	84.195	Xenopus_tropicalis
ENSGAGG00000023477	EDC3	100	69.822	ENSXMAG00000007377	edc3	100	69.822	Xiphophorus_maculatus