EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000023571 (Gene tree)
Gene ID: -
Gene Symbol: SNAI3
Alias: -
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 26898 bases
Position: chrPPEB01003195.1:34449-61346
Accession: 18411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000033002	zf-C2H2	PF00096.26	1.2e-22	1	4
ENSGAGP00000033002	zf-C2H2	PF00096.26	1.2e-22	2	4
ENSGAGP00000033002	zf-C2H2	PF00096.26	1.2e-22	3	4
ENSGAGP00000033002	zf-C2H2	PF00096.26	1.2e-22	4	4
ENSGAGP00000033003	zf-C2H2	PF00096.26	1.4e-22	1	4
ENSGAGP00000033003	zf-C2H2	PF00096.26	1.4e-22	2	4
ENSGAGP00000033003	zf-C2H2	PF00096.26	1.4e-22	3	4
ENSGAGP00000033003	zf-C2H2	PF00096.26	1.4e-22	4	4
ENSGAGP00000033002	zf-met	PF12874.7	8.3e-05	1	1
ENSGAGP00000033003	zf-met	PF12874.7	9.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000037418	SNAI3-202	1584	-	ENSGAGP00000033003	289 (aa)	-	-
ENSGAGT00000037417	SNAI3-201	1745	-	ENSGAGP00000033002	281 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000023571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000023571's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000023571	SNAI3	51	53.846	ENSGAGG00000011736	SCRT1	52	53.846
ENSGAGG00000023571	SNAI3	99	52.397	ENSGAGG00000000426	SNAI2	99	52.397
ENSGAGG00000023571	SNAI3	61	68.786	ENSGAGG00000022705	SNAI1	69	68.786

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000023571	SNAI3	99	64.527	ENSG00000185669	SNAI3	99	64.527	Homo_sapiens
ENSGAGG00000023571	SNAI3	99	50.345	ENSG00000019549	SNAI2	99	51.890	Homo_sapiens
ENSGAGG00000023571	SNAI3	99	52.881	ENSAMEG00000009606	SNAI2	99	53.559	Ailuropoda_melanoleuca
ENSGAGG00000023571	SNAI3	99	62.162	ENSANAG00000032748	SNAI3	99	62.162	Aotus_nancymaae
ENSGAGG00000023571	SNAI3	99	51.515	ENSANAG00000021163	SNAI2	99	53.559	Aotus_nancymaae
ENSGAGG00000023571	SNAI3	99	52.740	ENSBTAG00000013227	SNAI2	99	53.425	Bos_taurus
ENSGAGG00000023571	SNAI3	99	60.269	ENSBTAG00000017528	SNAI3	99	60.269	Bos_taurus
ENSGAGG00000023571	SNAI3	99	50.345	ENSCJAG00000013499	SNAI2	99	51.890	Callithrix_jacchus
ENSGAGG00000023571	SNAI3	99	53.061	ENSCAFG00000006638	SNAI2	99	52.881	Canis_familiaris
ENSGAGG00000023571	SNAI3	99	61.565	ENSCAFG00000029458	SNAI3	99	61.565	Canis_familiaris
ENSGAGG00000023571	SNAI3	99	61.905	ENSCAFG00020004719	SNAI3	99	61.905	Canis_lupus_dingo
ENSGAGG00000023571	SNAI3	99	53.061	ENSCAFG00020015384	SNAI2	99	52.881	Canis_lupus_dingo
ENSGAGG00000023571	SNAI3	99	53.082	ENSCHIG00000024410	SNAI2	99	53.767	Capra_hircus
ENSGAGG00000023571	SNAI3	99	60.535	ENSCHIG00000018087	SNAI3	99	60.535	Capra_hircus
ENSGAGG00000023571	SNAI3	94	59.108	ENSTSYG00000025594	SNAI3	90	59.108	Carlito_syrichta
ENSGAGG00000023571	SNAI3	58	73.171	ENSTSYG00000030892	SNAI2	67	68.333	Carlito_syrichta
ENSGAGG00000023571	SNAI3	51	80.282	ENSCAPG00000013078	SNAI2	82	66.848	Cavia_aperea
ENSGAGG00000023571	SNAI3	99	50.345	ENSCCAG00000024100	SNAI2	99	51.890	Cebus_capucinus
ENSGAGG00000023571	SNAI3	99	62.838	ENSCATG00000031714	SNAI3	99	62.838	Cercocebus_atys
ENSGAGG00000023571	SNAI3	99	50.345	ENSCATG00000028656	SNAI2	99	51.890	Cercocebus_atys
ENSGAGG00000023571	SNAI3	99	52.881	ENSCLAG00000011797	SNAI2	99	53.559	Chinchilla_lanigera
ENSGAGG00000023571	SNAI3	95	62.319	ENSCSAG00000003047	SNAI3	92	62.319	Chlorocebus_sabaeus
ENSGAGG00000023571	SNAI3	99	50.345	ENSCSAG00000014787	SNAI2	99	51.890	Chlorocebus_sabaeus
ENSGAGG00000023571	SNAI3	100	94.662	ENSCPBG00000023474	SNAI3	100	94.662	Chrysemys_picta_bellii
ENSGAGG00000023571	SNAI3	99	52.397	ENSCPBG00000020255	SNAI2	99	52.397	Chrysemys_picta_bellii
ENSGAGG00000023571	SNAI3	59	57.229	ENSCSAVG00000009819	-	85	57.229	Ciona_savignyi
ENSGAGG00000023571	SNAI3	94	63.469	ENSCANG00000031124	SNAI3	83	62.909	Colobus_angolensis_palliatus
ENSGAGG00000023571	SNAI3	99	50.345	ENSCANG00000029656	SNAI2	99	51.890	Colobus_angolensis_palliatus
ENSGAGG00000023571	SNAI3	99	56.949	ENSCGRG00001011389	Snai3	99	59.322	Cricetulus_griseus_chok1gshd
ENSGAGG00000023571	SNAI3	99	53.559	ENSCGRG00001013674	Snai2	99	53.559	Cricetulus_griseus_chok1gshd
ENSGAGG00000023571	SNAI3	99	56.949	ENSCGRG00000014932	Snai3	99	59.322	Cricetulus_griseus_crigri
ENSGAGG00000023571	SNAI3	99	53.559	ENSCGRG00000012119	Snai2	99	53.559	Cricetulus_griseus_crigri
ENSGAGG00000023571	SNAI3	80	42.797	ENSDNOG00000035204	-	99	44.068	Dasypus_novemcinctus
ENSGAGG00000023571	SNAI3	99	51.361	ENSDORG00000029620	Snai2	99	51.034	Dipodomys_ordii
ENSGAGG00000023571	SNAI3	100	58.644	ENSEASG00005000614	SNAI3	95	58.644	Equus_asinus_asinus
ENSGAGG00000023571	SNAI3	100	62.373	ENSECAG00000012131	SNAI3	99	62.373	Equus_caballus
ENSGAGG00000023571	SNAI3	99	52.721	ENSEEUG00000000841	SNAI3	99	52.721	Erinaceus_europaeus
ENSGAGG00000023571	SNAI3	58	71.951	ENSELUG00000021795	SNAI2	78	50.172	Esox_lucius
ENSGAGG00000023571	SNAI3	100	53.947	ENSELUG00000018742	-	99	53.947	Esox_lucius
ENSGAGG00000023571	SNAI3	99	57.338	ENSFCAG00000043885	SNAI3	98	57.338	Felis_catus
ENSGAGG00000023571	SNAI3	99	52.881	ENSFDAG00000016958	SNAI2	99	53.559	Fukomys_damarensis
ENSGAGG00000023571	SNAI3	99	64.527	ENSGGOG00000012559	SNAI3	99	64.527	Gorilla_gorilla
ENSGAGG00000023571	SNAI3	99	50.345	ENSGGOG00000000959	SNAI2	99	51.890	Gorilla_gorilla
ENSGAGG00000023571	SNAI3	99	50.338	ENSHCOG00000019435	SNAI2	99	51.178	Hippocampus_comes
ENSGAGG00000023571	SNAI3	51	80.986	ENSIPUG00000000131	snai2	99	49.498	Ictalurus_punctatus
ENSGAGG00000023571	SNAI3	99	52.881	ENSSTOG00000028743	SNAI2	99	52.542	Ictidomys_tridecemlineatus
ENSGAGG00000023571	SNAI3	99	59.864	ENSJJAG00000019934	Snai3	99	59.864	Jaculus_jaculus
ENSGAGG00000023571	SNAI3	99	51.333	ENSLOCG00000005992	SNAI2	99	51.890	Lepisosteus_oculatus
ENSGAGG00000023571	SNAI3	51	85.315	ENSLOCG00000004887	SNAI3	88	85.315	Lepisosteus_oculatus
ENSGAGG00000023571	SNAI3	99	53.220	ENSLAFG00000009299	SNAI2	99	52.862	Loxodonta_africana
ENSGAGG00000023571	SNAI3	99	61.224	ENSLAFG00000005117	SNAI3	99	61.224	Loxodonta_africana
ENSGAGG00000023571	SNAI3	99	50.345	ENSMFAG00000046061	SNAI2	99	51.890	Macaca_fascicularis
ENSGAGG00000023571	SNAI3	99	63.514	ENSMFAG00000032064	SNAI3	99	63.514	Macaca_fascicularis
ENSGAGG00000023571	SNAI3	99	50.345	ENSMMUG00000016195	SNAI2	99	51.890	Macaca_mulatta
ENSGAGG00000023571	SNAI3	99	63.514	ENSMMUG00000008716	SNAI3	99	63.514	Macaca_mulatta
ENSGAGG00000023571	SNAI3	99	50.345	ENSMNEG00000034216	SNAI2	99	51.890	Macaca_nemestrina
ENSGAGG00000023571	SNAI3	99	63.514	ENSMNEG00000045515	SNAI3	99	63.514	Macaca_nemestrina
ENSGAGG00000023571	SNAI3	99	50.345	ENSMLEG00000034407	SNAI2	99	51.890	Mandrillus_leucophaeus
ENSGAGG00000023571	SNAI3	96	62.455	ENSMLEG00000033191	SNAI3	92	62.455	Mandrillus_leucophaeus
ENSGAGG00000023571	SNAI3	99	53.559	ENSMAUG00000008119	Snai2	99	52.000	Mesocricetus_auratus
ENSGAGG00000023571	SNAI3	99	60.000	ENSMAUG00000001685	Snai3	99	60.000	Mesocricetus_auratus
ENSGAGG00000023571	SNAI3	99	53.559	ENSMOCG00000006622	Snai2	99	53.559	Microtus_ochrogaster
ENSGAGG00000023571	SNAI3	99	59.322	ENSMOCG00000003536	Snai3	99	59.322	Microtus_ochrogaster
ENSGAGG00000023571	SNAI3	99	52.759	ENSMODG00000010173	SNAI2	99	52.759	Monodelphis_domestica
ENSGAGG00000023571	SNAI3	99	56.463	MGP_CAROLIEiJ_G0031662	Snai3	99	56.463	Mus_caroli
ENSGAGG00000023571	SNAI3	99	53.741	MGP_CAROLIEiJ_G0020483	Snai2	99	53.559	Mus_caroli
ENSGAGG00000023571	SNAI3	99	53.401	ENSMUSG00000022676	Snai2	99	53.220	Mus_musculus
ENSGAGG00000023571	SNAI3	99	57.143	ENSMUSG00000006587	Snai3	99	57.143	Mus_musculus
ENSGAGG00000023571	SNAI3	99	57.966	MGP_PahariEiJ_G0023260	Snai3	99	57.966	Mus_pahari
ENSGAGG00000023571	SNAI3	99	53.741	MGP_PahariEiJ_G0016188	Snai2	99	53.559	Mus_pahari
ENSGAGG00000023571	SNAI3	99	57.143	MGP_SPRETEiJ_G0032780	Snai3	99	57.143	Mus_spretus
ENSGAGG00000023571	SNAI3	99	53.401	MGP_SPRETEiJ_G0021379	Snai2	99	53.220	Mus_spretus
ENSGAGG00000023571	SNAI3	99	59.524	ENSMPUG00000008104	SNAI3	99	59.524	Mustela_putorius_furo
ENSGAGG00000023571	SNAI3	99	52.881	ENSMPUG00000010793	SNAI2	99	53.559	Mustela_putorius_furo
ENSGAGG00000023571	SNAI3	99	52.542	ENSMLUG00000001086	SNAI2	99	51.333	Myotis_lucifugus
ENSGAGG00000023571	SNAI3	99	59.516	ENSNGAG00000023039	Snai3	99	59.516	Nannospalax_galili
ENSGAGG00000023571	SNAI3	99	51.034	ENSNLEG00000013421	SNAI2	99	52.577	Nomascus_leucogenys
ENSGAGG00000023571	SNAI3	99	64.865	ENSNLEG00000000595	SNAI3	99	64.865	Nomascus_leucogenys
ENSGAGG00000023571	SNAI3	98	52.113	ENSMEUG00000009510	SNAI2	99	52.113	Notamacropus_eugenii
ENSGAGG00000023571	SNAI3	99	52.414	ENSOANG00000007267	SNAI2	99	52.414	Ornithorhynchus_anatinus
ENSGAGG00000023571	SNAI3	99	60.135	ENSOGAG00000000419	SNAI3	99	61.279	Otolemur_garnettii
ENSGAGG00000023571	SNAI3	99	53.082	ENSOARG00000013030	SNAI2	99	53.767	Ovis_aries
ENSGAGG00000023571	SNAI3	94	43.214	ENSOARG00000013069	-	99	43.214	Ovis_aries
ENSGAGG00000023571	SNAI3	99	64.189	ENSPPAG00000043301	SNAI3	99	64.189	Pan_paniscus
ENSGAGG00000023571	SNAI3	99	50.345	ENSPPAG00000015662	SNAI2	99	51.890	Pan_paniscus
ENSGAGG00000023571	SNAI3	99	52.542	ENSPPRG00000012562	-	99	53.220	Panthera_pardus
ENSGAGG00000023571	SNAI3	99	57.045	ENSPPRG00000008511	SNAI3	98	57.045	Panthera_pardus
ENSGAGG00000023571	SNAI3	99	50.345	ENSPTRG00000020235	SNAI2	99	51.890	Pan_troglodytes
ENSGAGG00000023571	SNAI3	99	63.514	ENSPTRG00000008460	SNAI3	99	63.851	Pan_troglodytes
ENSGAGG00000023571	SNAI3	99	50.345	ENSPANG00000017540	SNAI2	99	51.890	Papio_anubis
ENSGAGG00000023571	SNAI3	99	63.176	ENSPANG00000000509	SNAI3	99	63.176	Papio_anubis
ENSGAGG00000023571	SNAI3	100	50.980	ENSPKIG00000007872	SNAI3	99	50.980	Paramormyrops_kingsleyae
ENSGAGG00000023571	SNAI3	99	51.903	ENSPKIG00000002254	SNAI2	99	53.177	Paramormyrops_kingsleyae
ENSGAGG00000023571	SNAI3	99	52.397	ENSPSIG00000016395	SNAI2	99	52.397	Pelodiscus_sinensis
ENSGAGG00000023571	SNAI3	81	85.153	ENSPSIG00000004262	SNAI3	91	85.153	Pelodiscus_sinensis
ENSGAGG00000023571	SNAI3	99	52.203	ENSPMGG00000013179	SNAI2	99	53.716	Periophthalmus_magnuspinnatus
ENSGAGG00000023571	SNAI3	99	53.898	ENSPEMG00000011739	Snai2	99	53.898	Peromyscus_maniculatus_bairdii
ENSGAGG00000023571	SNAI3	99	52.414	ENSPCIG00000025156	SNAI2	99	52.414	Phascolarctos_cinereus
ENSGAGG00000023571	SNAI3	59	71.429	ENSPREG00000008528	SNAI2	62	71.429	Poecilia_reticulata
ENSGAGG00000023571	SNAI3	99	50.345	ENSPPYG00000018578	SNAI2	99	51.890	Pongo_abelii
ENSGAGG00000023571	SNAI3	99	64.407	ENSPPYG00000007643	SNAI3	99	64.407	Pongo_abelii
ENSGAGG00000023571	SNAI3	99	52.881	ENSPCOG00000015656	SNAI2	99	53.559	Propithecus_coquereli
ENSGAGG00000023571	SNAI3	99	51.839	ENSPVAG00000009457	SNAI2	99	52.542	Pteropus_vampyrus
ENSGAGG00000023571	SNAI3	99	59.184	ENSRNOG00000013586	Snai3	99	59.184	Rattus_norvegicus
ENSGAGG00000023571	SNAI3	99	63.176	ENSRBIG00000025770	SNAI3	99	63.176	Rhinopithecus_bieti
ENSGAGG00000023571	SNAI3	99	50.345	ENSRBIG00000041133	SNAI2	99	51.890	Rhinopithecus_bieti
ENSGAGG00000023571	SNAI3	99	62.585	ENSRROG00000032757	SNAI3	99	62.585	Rhinopithecus_roxellana
ENSGAGG00000023571	SNAI3	99	50.345	ENSRROG00000032273	SNAI2	99	51.890	Rhinopithecus_roxellana
ENSGAGG00000023571	SNAI3	99	50.345	ENSSBOG00000035774	SNAI2	99	51.890	Saimiri_boliviensis_boliviensis
ENSGAGG00000023571	SNAI3	99	52.414	ENSSHAG00000004205	SNAI2	99	52.414	Sarcophilus_harrisii
ENSGAGG00000023571	SNAI3	99	49.346	ENSSFOG00015016115	snai3	93	47.896	Scleropages_formosus
ENSGAGG00000023571	SNAI3	99	52.069	ENSSFOG00015018025	SNAI2	99	53.333	Scleropages_formosus
ENSGAGG00000023571	SNAI3	99	51.712	ENSSPUG00000005427	-	99	50.676	Sphenodon_punctatus
ENSGAGG00000023571	SNAI3	99	53.220	ENSSSCG00000039568	SNAI2	99	51.667	Sus_scrofa
ENSGAGG00000023571	SNAI3	99	59.797	ENSTTRG00000006262	SNAI3	99	59.797	Tursiops_truncatus
ENSGAGG00000023571	SNAI3	99	64.626	ENSUAMG00000020030	SNAI3	99	63.946	Ursus_americanus
ENSGAGG00000023571	SNAI3	51	81.690	ENSUAMG00000014942	SNAI2	79	67.935	Ursus_americanus
ENSGAGG00000023571	SNAI3	58	73.171	ENSUMAG00000006525	SNAI2	99	52.740	Ursus_maritimus
ENSGAGG00000023571	SNAI3	99	60.884	ENSVVUG00000003233	SNAI3	99	60.884	Vulpes_vulpes
ENSGAGG00000023571	SNAI3	99	52.721	ENSVVUG00000017625	SNAI2	99	52.862	Vulpes_vulpes
ENSGAGG00000023571	SNAI3	99	50.512	ENSXETG00000024006	snai2	99	50.512	Xenopus_tropicalis