EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000023664 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 148239 bases
Position: chrPPEB01002038.1:4910-153148
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000033187	zf-CCCH	PF00642.24	2.8e-06	1	1
ENSGAGP00000033183	zf-CCCH	PF00642.24	3.5e-06	1	1
ENSGAGP00000033179	zf-CCCH	PF00642.24	4.1e-06	1	1
ENSGAGP00000033175	zf-CCCH	PF00642.24	4.8e-06	1	1
ENSGAGP00000033190	zf-CCCH	PF00642.24	4.9e-06	1	1
ENSGAGP00000033191	zf-CCCH	PF00642.24	4.9e-06	1	1
ENSGAGP00000033173	zf-CCCH	PF00642.24	4.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000037599	-	2925	-	ENSGAGP00000033175	825 (aa)	-	-
ENSGAGT00000037597	-	2673	-	ENSGAGP00000033173	830 (aa)	-	-
ENSGAGT00000037614	-	2824	-	ENSGAGP00000033190	827 (aa)	-	-
ENSGAGT00000037615	-	2986	-	ENSGAGP00000033191	827 (aa)	-	-
ENSGAGT00000037607	-	2736	-	ENSGAGP00000033183	762 (aa)	-	-
ENSGAGT00000037603	-	2832	-	ENSGAGP00000033179	794 (aa)	-	-
ENSGAGT00000037611	-	2670	-	ENSGAGP00000033187	740 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000023664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000023664's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000023664	-	96	55.273	ENSGAGG00000007411	UNK	95	57.271

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000023664	-	99	75.393	ENSG00000059145	UNKL	99	76.267	Homo_sapiens
ENSGAGG00000023664	-	98	79.515	ENSAPOG00000023784	unkl	99	79.784	Acanthochromis_polyacanthus
ENSGAGG00000023664	-	82	89.809	ENSACIG00000023268	unkl	97	79.781	Amphilophus_citrinellus
ENSGAGG00000023664	-	98	79.245	ENSAOCG00000022845	unkl	99	79.784	Amphiprion_ocellaris
ENSGAGG00000023664	-	97	79.837	ENSAPEG00000011709	unkl	99	78.756	Amphiprion_percula
ENSGAGG00000023664	-	98	79.784	ENSATEG00000004328	unkl	99	79.737	Anabas_testudineus
ENSGAGG00000023664	-	88	92.014	ENSAPLG00000016186	-	89	92.014	Anas_platyrhynchos
ENSGAGG00000023664	-	93	74.631	ENSANAG00000021942	-	99	74.631	Aotus_nancymaae
ENSGAGG00000023664	-	98	79.245	ENSACLG00000006189	unkl	99	79.893	Astatotilapia_calliptera
ENSGAGG00000023664	-	99	80.697	ENSAMXG00000007890	unkl	99	80.319	Astyanax_mexicanus
ENSGAGG00000023664	-	99	73.560	ENSBTAG00000014126	-	99	66.932	Bos_taurus
ENSGAGG00000023664	-	90	81.847	ENSCJAG00000013151	-	97	81.847	Callithrix_jacchus
ENSGAGG00000023664	-	90	83.224	ENSCAFG00000019581	UNKL	98	64.564	Canis_familiaris
ENSGAGG00000023664	-	84	84.713	ENSCAFG00020001284	-	98	84.713	Canis_lupus_dingo
ENSGAGG00000023664	-	95	77.810	ENSTSYG00000033619	-	97	77.810	Carlito_syrichta
ENSGAGG00000023664	-	72	85.590	ENSCAPG00000014785	-	89	85.590	Cavia_aperea
ENSGAGG00000023664	-	85	85.350	ENSCPOG00000011846	-	99	74.332	Cavia_porcellus
ENSGAGG00000023664	-	99	67.198	ENSCCAG00000022808	-	99	76.776	Cebus_capucinus
ENSGAGG00000023664	-	99	75.131	ENSCATG00000033183	-	99	76.000	Cercocebus_atys
ENSGAGG00000023664	-	89	75.989	ENSCLAG00000015420	-	99	76.945	Chinchilla_lanigera
ENSGAGG00000023664	-	99	74.869	ENSCSAG00000011709	-	99	75.733	Chlorocebus_sabaeus
ENSGAGG00000023664	-	100	96.010	ENSCPBG00000002794	-	100	96.010	Chrysemys_picta_bellii
ENSGAGG00000023664	-	86	62.652	ENSCANG00000036315	-	98	75.090	Colobus_angolensis_palliatus
ENSGAGG00000023664	-	99	75.936	ENSCGRG00001014153	Unkl	99	75.936	Cricetulus_griseus_chok1gshd
ENSGAGG00000023664	-	95	77.168	ENSCGRG00000010384	Unkl	99	77.168	Cricetulus_griseus_crigri
ENSGAGG00000023664	-	91	90.446	ENSCSEG00000010415	unkl	90	80.488	Cynoglossus_semilaevis
ENSGAGG00000023664	-	97	79.515	ENSCVAG00000015910	unkl	98	80.429	Cyprinodon_variegatus
ENSGAGG00000023664	-	99	81.501	ENSDARG00000037838	unkl	99	72.914	Danio_rerio
ENSGAGG00000023664	-	59	59.607	ENSDNOG00000045552	-	91	60.613	Dasypus_novemcinctus
ENSGAGG00000023664	-	90	83.262	ENSDORG00000015663	Unkl	91	83.262	Dipodomys_ordii
ENSGAGG00000023664	-	87	83.333	ENSEASG00005000274	-	99	75.610	Equus_asinus_asinus
ENSGAGG00000023664	-	89	76.965	ENSECAG00000010641	UNKL	99	76.965	Equus_caballus
ENSGAGG00000023664	-	83	90.127	ENSELUG00000021446	unkl	96	90.127	Esox_lucius
ENSGAGG00000023664	-	89	83.492	ENSFCAG00000010643	-	99	83.492	Felis_catus
ENSGAGG00000023664	-	83	89.097	ENSFHEG00000002811	unkl	99	79.896	Fundulus_heteroclitus
ENSGAGG00000023664	-	99	80.892	ENSGALG00000043765	-	99	83.704	Gallus_gallus
ENSGAGG00000023664	-	99	72.143	ENSGAFG00000017960	unkl	98	79.893	Gambusia_affinis
ENSGAGG00000023664	-	99	74.935	ENSGGOG00000014915	-	99	75.798	Gorilla_gorilla
ENSGAGG00000023664	-	98	79.245	ENSHBUG00000003486	unkl	99	79.893	Haplochromis_burtoni
ENSGAGG00000023664	-	99	68.833	ENSHGLG00000001586	-	99	75.467	Heterocephalus_glaber_female
ENSGAGG00000023664	-	95	69.284	ENSHGLG00100007463	-	99	76.657	Heterocephalus_glaber_male
ENSGAGG00000023664	-	86	82.471	ENSHCOG00000015734	unkl	99	77.309	Hippocampus_comes
ENSGAGG00000023664	-	94	85.088	ENSIPUG00000019510	unkl	99	81.868	Ictalurus_punctatus
ENSGAGG00000023664	-	94	78.171	ENSSTOG00000003487	-	99	78.171	Ictidomys_tridecemlineatus
ENSGAGG00000023664	-	79	87.931	ENSJJAG00000011047	Unkl	95	86.195	Jaculus_jaculus
ENSGAGG00000023664	-	91	90.127	ENSKMAG00000018810	unkl	99	80.429	Kryptolebias_marmoratus
ENSGAGG00000023664	-	99	68.379	ENSLBEG00000023912	unkl	95	87.261	Labrus_bergylta
ENSGAGG00000023664	-	77	91.518	ENSLACG00000009285	unkl	81	91.518	Latimeria_chalumnae
ENSGAGG00000023664	-	99	76.691	ENSLOCG00000003648	unkl	99	75.131	Lepisosteus_oculatus
ENSGAGG00000023664	-	99	66.490	ENSLAFG00000018262	-	99	76.000	Loxodonta_africana
ENSGAGG00000023664	-	99	74.869	ENSMFAG00000000632	-	99	75.733	Macaca_fascicularis
ENSGAGG00000023664	-	99	74.869	ENSMMUG00000012440	-	99	75.733	Macaca_mulatta
ENSGAGG00000023664	-	96	67.967	ENSMNEG00000036131	-	96	68.182	Macaca_nemestrina
ENSGAGG00000023664	-	95	76.271	ENSMLEG00000037946	-	99	77.233	Mandrillus_leucophaeus
ENSGAGG00000023664	-	91	89.809	ENSMAMG00000002709	unkl	99	88.125	Mastacembelus_armatus
ENSGAGG00000023664	-	98	79.245	ENSMZEG00005022469	unkl	99	79.893	Maylandia_zebra
ENSGAGG00000023664	-	96	76.889	ENSMGAG00000006920	UNKL	99	76.580	Meleagris_gallopavo
ENSGAGG00000023664	-	99	75.936	ENSMAUG00000016281	Unkl	99	75.936	Mesocricetus_auratus
ENSGAGG00000023664	-	92	73.651	ENSMICG00000007141	-	97	73.651	Microcebus_murinus
ENSGAGG00000023664	-	99	70.346	ENSMOCG00000011424	Unkl	99	75.936	Microtus_ochrogaster
ENSGAGG00000023664	-	80	90.127	ENSMMOG00000014848	unkl	99	79.211	Mola_mola
ENSGAGG00000023664	-	87	83.188	ENSMODG00000016188	-	93	83.188	Monodelphis_domestica
ENSGAGG00000023664	-	98	79.245	ENSMALG00000020837	unkl	99	70.097	Monopterus_albus
ENSGAGG00000023664	-	89	80.172	MGP_CAROLIEiJ_G0021225	Unkl	99	69.947	Mus_caroli
ENSGAGG00000023664	-	85	85.312	ENSMUSG00000015127	Unkl	99	75.668	Mus_musculus
ENSGAGG00000023664	-	89	80.460	MGP_PahariEiJ_G0023543	Unkl	99	76.471	Mus_pahari
ENSGAGG00000023664	-	85	85.312	MGP_SPRETEiJ_G0022136	Unkl	99	75.668	Mus_spretus
ENSGAGG00000023664	-	74	84.071	ENSMPUG00000015653	-	97	84.071	Mustela_putorius_furo
ENSGAGG00000023664	-	83	73.118	ENSMLUG00000011207	-	90	73.118	Myotis_lucifugus
ENSGAGG00000023664	-	85	87.937	ENSNGAG00000002821	Unkl	100	76.738	Nannospalax_galili
ENSGAGG00000023664	-	98	79.245	ENSNBRG00000015104	unkl	93	89.809	Neolamprologus_brichardi
ENSGAGG00000023664	-	95	76.705	ENSNLEG00000008624	-	97	77.681	Nomascus_leucogenys
ENSGAGG00000023664	-	99	68.833	ENSODEG00000017747	-	99	76.152	Octodon_degus
ENSGAGG00000023664	-	95	82.471	ENSONIG00000001411	unkl	87	82.759	Oreochromis_niloticus
ENSGAGG00000023664	-	66	75.207	ENSOANG00000021809	-	100	74.725	Ornithorhynchus_anatinus
ENSGAGG00000023664	-	95	82.436	ENSORLG00000005070	unkl	99	79.625	Oryzias_latipes
ENSGAGG00000023664	-	95	82.436	ENSORLG00020005376	unkl	99	79.625	Oryzias_latipes_hni
ENSGAGG00000023664	-	95	82.436	ENSORLG00015018545	unkl	99	79.625	Oryzias_latipes_hsok
ENSGAGG00000023664	-	95	82.720	ENSOMEG00000023985	unkl	99	77.436	Oryzias_melastigma
ENSGAGG00000023664	-	95	57.221	ENSOARG00000015636	-	99	56.094	Ovis_aries
ENSGAGG00000023664	-	87	74.296	ENSPPAG00000043365	-	99	75.451	Pan_paniscus
ENSGAGG00000023664	-	79	85.121	ENSPPRG00000018472	-	99	85.121	Panthera_pardus
ENSGAGG00000023664	-	73	85.664	ENSPTIG00000000863	-	88	83.168	Panthera_tigris_altaica
ENSGAGG00000023664	-	99	75.393	ENSPTRG00000007591	UNKL	99	76.267	Pan_troglodytes
ENSGAGG00000023664	-	99	74.607	ENSPANG00000015754	-	99	75.467	Papio_anubis
ENSGAGG00000023664	-	89	76.676	ENSPKIG00000006764	-	95	79.494	Paramormyrops_kingsleyae
ENSGAGG00000023664	-	99	79.357	ENSPKIG00000002101	unkl	99	78.272	Paramormyrops_kingsleyae
ENSGAGG00000023664	-	62	89.864	ENSPSIG00000011268	-	99	89.313	Pelodiscus_sinensis
ENSGAGG00000023664	-	85	87.963	ENSPMGG00000020856	unkl	99	76.768	Periophthalmus_magnuspinnatus
ENSGAGG00000023664	-	99	70.080	ENSPEMG00000008937	Unkl	99	75.668	Peromyscus_maniculatus_bairdii
ENSGAGG00000023664	-	99	85.007	ENSPCIG00000015633	-	99	83.516	Phascolarctos_cinereus
ENSGAGG00000023664	-	97	78.976	ENSPFOG00000010836	unkl	90	79.625	Poecilia_formosa
ENSGAGG00000023664	-	99	72.749	ENSPLAG00000002294	unkl	98	79.625	Poecilia_latipinna
ENSGAGG00000023664	-	97	78.976	ENSPMEG00000019000	unkl	98	79.893	Poecilia_mexicana
ENSGAGG00000023664	-	83	89.809	ENSPREG00000007918	unkl	99	79.032	Poecilia_reticulata
ENSGAGG00000023664	-	95	73.729	ENSPPYG00000006950	-	99	74.640	Pongo_abelii
ENSGAGG00000023664	-	55	86.957	ENSPCAG00000017060	-	83	86.957	Procavia_capensis
ENSGAGG00000023664	-	85	84.076	ENSPCOG00000017889	-	99	66.090	Propithecus_coquereli
ENSGAGG00000023664	-	58	73.433	ENSPVAG00000016649	-	88	73.433	Pteropus_vampyrus
ENSGAGG00000023664	-	98	79.515	ENSPNYG00000008111	unkl	99	80.161	Pundamilia_nyererei
ENSGAGG00000023664	-	89	91.374	ENSPNAG00000010422	unkl	99	81.649	Pygocentrus_nattereri
ENSGAGG00000023664	-	89	80.460	ENSRNOG00000054605	Unkl	99	76.471	Rattus_norvegicus
ENSGAGG00000023664	-	99	65.803	ENSRBIG00000040235	-	99	66.755	Rhinopithecus_bieti
ENSGAGG00000023664	-	95	75.989	ENSRROG00000029341	-	99	77.233	Rhinopithecus_roxellana
ENSGAGG00000023664	-	95	68.044	ENSSBOG00000031173	-	99	77.876	Saimiri_boliviensis_boliviensis
ENSGAGG00000023664	-	95	86.646	ENSSHAG00000008411	-	98	84.956	Sarcophilus_harrisii
ENSGAGG00000023664	-	87	67.270	ENSSFOG00015018904	unkl	93	65.676	Scleropages_formosus
ENSGAGG00000023664	-	82	90.127	ENSSMAG00000005106	unkl	99	79.839	Scophthalmus_maximus
ENSGAGG00000023664	-	98	79.515	ENSSDUG00000019045	unkl	99	80.376	Seriola_dumerili
ENSGAGG00000023664	-	98	79.515	ENSSLDG00000010672	unkl	99	80.376	Seriola_lalandi_dorsalis
ENSGAGG00000023664	-	99	86.160	ENSSPUG00000009763	-	99	86.240	Sphenodon_punctatus
ENSGAGG00000023664	-	98	79.515	ENSSPAG00000017109	unkl	97	80.328	Stegastes_partitus
ENSGAGG00000023664	-	99	73.822	ENSSSCG00000022963	-	99	74.667	Sus_scrofa
ENSGAGG00000023664	-	97	79.133	ENSTRUG00000012086	unkl	98	79.133	Takifugu_rubripes
ENSGAGG00000023664	-	97	66.883	ENSTNIG00000018588	unkl	83	91.919	Tetraodon_nigroviridis
ENSGAGG00000023664	-	55	86.957	ENSTTRG00000011985	-	71	86.957	Tursiops_truncatus
ENSGAGG00000023664	-	71	85.714	ENSVVUG00000011182	-	79	85.714	Vulpes_vulpes
ENSGAGG00000023664	-	99	79.134	ENSXETG00000021599	unkl	99	83.514	Xenopus_tropicalis
ENSGAGG00000023664	-	99	69.514	ENSXCOG00000016491	unkl	98	79.625	Xiphophorus_couchianus
ENSGAGG00000023664	-	99	68.200	ENSXMAG00000009520	unkl	98	79.625	Xiphophorus_maculatus