EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000023681 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 418154 bases
Position: chrPPEB01000407.1:45537-463690
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000033232	Fox-1_C	PF12414.8	3.5e-43	1	1
ENSGAGP00000033218	Fox-1_C	PF12414.8	7e-41	1	1
ENSGAGP00000033225	Fox-1_C	PF12414.8	9.2e-41	1	1
ENSGAGP00000033221	Fox-1_C	PF12414.8	1.4e-40	1	1
ENSGAGP00000033229	Fox-1_C	PF12414.8	2.2e-38	1	1
ENSGAGP00000033234	Fox-1_C	PF12414.8	2.2e-38	1	1
ENSGAGP00000033215	Fox-1_C	PF12414.8	2.4e-38	1	1
ENSGAGP00000033229	RRM_1	PF00076.22	1e-18	1	1
ENSGAGP00000033234	RRM_1	PF00076.22	1e-18	1	1
ENSGAGP00000033215	RRM_1	PF00076.22	1.1e-18	1	1
ENSGAGP00000033225	RRM_1	PF00076.22	1.2e-18	1	1
ENSGAGP00000033221	RRM_1	PF00076.22	1.4e-18	1	1
ENSGAGP00000033232	RRM_1	PF00076.22	2.7e-18	1	1
ENSGAGP00000033218	RRM_1	PF00076.22	6.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000037639	RBFOX1-201	1799	-	ENSGAGP00000033215	395 (aa)	-	-
ENSGAGT00000037642	RBFOX1-202	1796	-	ENSGAGP00000033218	394 (aa)	-	-
ENSGAGT00000037645	RBFOX1-203	1746	-	ENSGAGP00000033221	418 (aa)	-	-
ENSGAGT00000037655	RBFOX1-205	1569	-	ENSGAGP00000033229	376 (aa)	-	-
ENSGAGT00000037658	RBFOX1-206	1614	-	ENSGAGP00000033232	377 (aa)	-	-
ENSGAGT00000037660	RBFOX1-207	1680	-	ENSGAGP00000033234	377 (aa)	-	-
ENSGAGT00000037651	RBFOX1-204	1665	-	ENSGAGP00000033225	391 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000023681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000023681's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000023681	RBFOX1	78	58.108	ENSGAGG00000012440	-	87	63.100
ENSGAGG00000023681	RBFOX1	97	66.667	ENSGAGG00000025884	RBFOX2	98	64.373
ENSGAGG00000023681	RBFOX1	100	66.329	ENSGAGG00000020025	RBFOX3	100	77.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000023681	RBFOX1	100	94.960	ENSG00000078328	RBFOX1	100	92.911	Homo_sapiens
ENSGAGG00000023681	RBFOX1	100	77.665	ENSAPOG00000003197	rbfox1	98	80.366	Acanthochromis_polyacanthus
ENSGAGG00000023681	RBFOX1	63	91.020	ENSAMEG00000008605	RBFOX1	100	90.000	Ailuropoda_melanoleuca
ENSGAGG00000023681	RBFOX1	71	64.865	ENSACIG00000005478	rbfox1	68	69.259	Amphilophus_citrinellus
ENSGAGG00000023681	RBFOX1	79	70.032	ENSAOCG00000008283	rbfox1	97	77.660	Amphiprion_ocellaris
ENSGAGG00000023681	RBFOX1	100	69.657	ENSAPEG00000010636	rbfox1	100	70.350	Amphiprion_percula
ENSGAGG00000023681	RBFOX1	79	69.279	ENSATEG00000007513	rbfox1	97	76.408	Anabas_testudineus
ENSGAGG00000023681	RBFOX1	100	99.204	ENSAPLG00000013263	RBFOX1	98	96.684	Anas_platyrhynchos
ENSGAGG00000023681	RBFOX1	100	89.211	ENSACAG00000004013	RBFOX1	98	87.277	Anolis_carolinensis
ENSGAGG00000023681	RBFOX1	100	92.857	ENSANAG00000029527	RBFOX1	98	94.103	Aotus_nancymaae
ENSGAGG00000023681	RBFOX1	60	88.000	ENSAMXG00000002431	rbfox1	64	89.498	Astyanax_mexicanus
ENSGAGG00000023681	RBFOX1	100	93.369	ENSBTAG00000007210	RBFOX1	100	93.369	Bos_taurus
ENSGAGG00000023681	RBFOX1	100	94.960	ENSCJAG00000017351	RBFOX1	100	93.350	Callithrix_jacchus
ENSGAGG00000023681	RBFOX1	100	93.165	ENSCAFG00000019082	RBFOX1	100	93.165	Canis_familiaris
ENSGAGG00000023681	RBFOX1	100	80.203	ENSCAFG00020024881	RBFOX1	99	80.457	Canis_lupus_dingo
ENSGAGG00000023681	RBFOX1	100	93.899	ENSCHIG00000023549	RBFOX1	100	93.899	Capra_hircus
ENSGAGG00000023681	RBFOX1	100	92.593	ENSTSYG00000005334	RBFOX1	100	93.830	Carlito_syrichta
ENSGAGG00000023681	RBFOX1	100	94.164	ENSCAPG00000017669	RBFOX1	100	91.517	Cavia_aperea
ENSGAGG00000023681	RBFOX1	100	94.164	ENSCPOG00000011314	RBFOX1	100	91.388	Cavia_porcellus
ENSGAGG00000023681	RBFOX1	100	92.857	ENSCCAG00000023031	RBFOX1	100	92.823	Cebus_capucinus
ENSGAGG00000023681	RBFOX1	100	92.911	ENSCATG00000033816	RBFOX1	100	92.823	Cercocebus_atys
ENSGAGG00000023681	RBFOX1	100	94.164	ENSCLAG00000012761	RBFOX1	100	91.388	Chinchilla_lanigera
ENSGAGG00000023681	RBFOX1	100	92.042	ENSCSAG00000008739	RBFOX1	100	92.042	Chlorocebus_sabaeus
ENSGAGG00000023681	RBFOX1	84	91.189	ENSCHOG00000012843	RBFOX1	100	72.727	Choloepus_hoffmanni
ENSGAGG00000023681	RBFOX1	100	99.735	ENSCPBG00000026626	RBFOX1	98	99.487	Chrysemys_picta_bellii
ENSGAGG00000023681	RBFOX1	100	92.857	ENSCANG00000033125	RBFOX1	100	92.823	Colobus_angolensis_palliatus
ENSGAGG00000023681	RBFOX1	100	93.899	ENSCGRG00001013729	Rbfox1	100	91.627	Cricetulus_griseus_chok1gshd
ENSGAGG00000023681	RBFOX1	100	93.899	ENSCGRG00000003272	Rbfox1	100	91.627	Cricetulus_griseus_crigri
ENSGAGG00000023681	RBFOX1	100	71.285	ENSCSEG00000008840	rbfox1	100	74.663	Cynoglossus_semilaevis
ENSGAGG00000023681	RBFOX1	100	83.333	ENSDARG00000014746	rbfox1	100	87.805	Danio_rerio
ENSGAGG00000023681	RBFOX1	100	95.225	ENSDNOG00000043612	RBFOX1	94	92.327	Dasypus_novemcinctus
ENSGAGG00000023681	RBFOX1	100	92.632	ENSDORG00000010024	Rbfox1	94	92.632	Dipodomys_ordii
ENSGAGG00000023681	RBFOX1	100	74.402	ENSETEG00000003771	RBFOX1	100	74.402	Echinops_telfairi
ENSGAGG00000023681	RBFOX1	100	95.225	ENSEASG00005011599	RBFOX1	100	92.911	Equus_asinus_asinus
ENSGAGG00000023681	RBFOX1	100	92.857	ENSECAG00000012667	RBFOX1	100	92.658	Equus_caballus
ENSGAGG00000023681	RBFOX1	83	68.919	ENSELUG00000013096	rbfox1	97	73.488	Esox_lucius
ENSGAGG00000023681	RBFOX1	100	94.960	ENSFCAG00000025322	RBFOX1	100	92.042	Felis_catus
ENSGAGG00000023681	RBFOX1	86	96.296	ENSFALG00000004027	RBFOX1	97	98.762	Ficedula_albicollis
ENSGAGG00000023681	RBFOX1	100	94.695	ENSFDAG00000007388	RBFOX1	100	91.866	Fukomys_damarensis
ENSGAGG00000023681	RBFOX1	100	97.368	ENSGALG00000034325	RBFOX1	100	98.417	Gallus_gallus
ENSGAGG00000023681	RBFOX1	100	92.857	ENSGGOG00000016871	-	100	92.823	Gorilla_gorilla
ENSGAGG00000023681	RBFOX1	100	94.430	ENSHGLG00000016944	RBFOX1	100	91.627	Heterocephalus_glaber_female
ENSGAGG00000023681	RBFOX1	100	94.430	ENSHGLG00100003272	RBFOX1	100	91.627	Heterocephalus_glaber_male
ENSGAGG00000023681	RBFOX1	89	70.029	ENSHCOG00000016419	rbfox1	91	76.324	Hippocampus_comes
ENSGAGG00000023681	RBFOX1	100	84.615	ENSIPUG00000015215	rbfox1	100	89.174	Ictalurus_punctatus
ENSGAGG00000023681	RBFOX1	100	94.164	ENSSTOG00000000322	RBFOX1	100	91.627	Ictidomys_tridecemlineatus
ENSGAGG00000023681	RBFOX1	100	91.512	ENSJJAG00000002575	Rbfox1	100	88.995	Jaculus_jaculus
ENSGAGG00000023681	RBFOX1	100	75.000	ENSLBEG00000014659	rbfox1	97	77.929	Labrus_bergylta
ENSGAGG00000023681	RBFOX1	100	90.000	ENSLOCG00000006675	rbfox1	99	87.089	Lepisosteus_oculatus
ENSGAGG00000023681	RBFOX1	81	96.104	ENSLAFG00000011480	RBFOX1	100	96.104	Loxodonta_africana
ENSGAGG00000023681	RBFOX1	100	93.122	ENSMFAG00000036447	RBFOX1	100	93.062	Macaca_fascicularis
ENSGAGG00000023681	RBFOX1	100	95.225	ENSMMUG00000003458	RBFOX1	99	94.809	Macaca_mulatta
ENSGAGG00000023681	RBFOX1	100	93.401	ENSMNEG00000032034	RBFOX1	100	93.062	Macaca_nemestrina
ENSGAGG00000023681	RBFOX1	100	92.857	ENSMLEG00000015382	RBFOX1	100	92.823	Mandrillus_leucophaeus
ENSGAGG00000023681	RBFOX1	100	74.490	ENSMAMG00000003142	rbfox1	100	78.689	Mastacembelus_armatus
ENSGAGG00000023681	RBFOX1	77	91.065	ENSMGAG00000008606	RBFOX1	98	90.909	Meleagris_gallopavo
ENSGAGG00000023681	RBFOX1	100	54.907	ENSMAUG00000020570	Rbfox1	96	52.591	Mesocricetus_auratus
ENSGAGG00000023681	RBFOX1	100	93.369	ENSMICG00000034286	RBFOX1	100	93.369	Microcebus_murinus
ENSGAGG00000023681	RBFOX1	100	93.899	ENSMOCG00000020932	Rbfox1	98	93.899	Microtus_ochrogaster
ENSGAGG00000023681	RBFOX1	89	72.861	ENSMMOG00000009716	rbfox1	86	78.914	Mola_mola
ENSGAGG00000023681	RBFOX1	94	94.648	ENSMODG00000005826	RBFOX1	100	96.893	Monodelphis_domestica
ENSGAGG00000023681	RBFOX1	100	77.062	ENSMALG00000003337	rbfox1	98	80.319	Monopterus_albus
ENSGAGG00000023681	RBFOX1	100	94.164	MGP_CAROLIEiJ_G0020427	Rbfox1	100	91.866	Mus_caroli
ENSGAGG00000023681	RBFOX1	100	93.899	ENSMUSG00000008658	Rbfox1	99	95.455	Mus_musculus
ENSGAGG00000023681	RBFOX1	100	94.164	MGP_PahariEiJ_G0016135	Rbfox1	100	91.866	Mus_pahari
ENSGAGG00000023681	RBFOX1	100	93.634	MGP_SPRETEiJ_G0021321	Rbfox1	100	91.388	Mus_spretus
ENSGAGG00000023681	RBFOX1	100	92.893	ENSMPUG00000014822	RBFOX1	100	92.893	Mustela_putorius_furo
ENSGAGG00000023681	RBFOX1	81	96.091	ENSMLUG00000015896	RBFOX1	100	96.091	Myotis_lucifugus
ENSGAGG00000023681	RBFOX1	100	94.695	ENSNGAG00000023276	Rbfox1	100	92.344	Nannospalax_galili
ENSGAGG00000023681	RBFOX1	100	61.347	ENSNBRG00000011084	rbfox1	97	61.005	Neolamprologus_brichardi
ENSGAGG00000023681	RBFOX1	100	92.593	ENSNLEG00000010017	-	100	92.584	Nomascus_leucogenys
ENSGAGG00000023681	RBFOX1	88	93.878	ENSMEUG00000012525	RBFOX1	100	79.187	Notamacropus_eugenii
ENSGAGG00000023681	RBFOX1	88	91.429	ENSOPRG00000006199	-	100	75.120	Ochotona_princeps
ENSGAGG00000023681	RBFOX1	100	93.899	ENSODEG00000013166	RBFOX1	100	91.148	Octodon_degus
ENSGAGG00000023681	RBFOX1	100	93.899	ENSOANG00000002379	RBFOX1	100	93.899	Ornithorhynchus_anatinus
ENSGAGG00000023681	RBFOX1	58	93.088	ENSOCUG00000001205	-	97	93.119	Oryctolagus_cuniculus
ENSGAGG00000023681	RBFOX1	100	94.695	ENSOGAG00000025535	RBFOX1	95	94.695	Otolemur_garnettii
ENSGAGG00000023681	RBFOX1	65	82.305	ENSOARG00000005135	RBFOX1	98	81.377	Ovis_aries
ENSGAGG00000023681	RBFOX1	100	94.960	ENSPPAG00000036238	-	100	94.262	Pan_paniscus
ENSGAGG00000023681	RBFOX1	100	92.857	ENSPPRG00000006546	RBFOX1	100	92.823	Panthera_pardus
ENSGAGG00000023681	RBFOX1	100	83.289	ENSPTIG00000021154	RBFOX1	99	80.000	Panthera_tigris_altaica
ENSGAGG00000023681	RBFOX1	100	92.857	ENSPTRG00000007744	RBFOX1	100	92.823	Pan_troglodytes
ENSGAGG00000023681	RBFOX1	100	92.857	ENSPANG00000026500	RBFOX1	100	92.823	Papio_anubis
ENSGAGG00000023681	RBFOX1	80	84.385	ENSPKIG00000019353	rbfox1	86	93.585	Paramormyrops_kingsleyae
ENSGAGG00000023681	RBFOX1	100	85.488	ENSPKIG00000009667	-	95	89.766	Paramormyrops_kingsleyae
ENSGAGG00000023681	RBFOX1	100	99.735	ENSPSIG00000006523	RBFOX1	97	97.436	Pelodiscus_sinensis
ENSGAGG00000023681	RBFOX1	100	94.164	ENSPEMG00000017607	Rbfox1	100	91.866	Peromyscus_maniculatus_bairdii
ENSGAGG00000023681	RBFOX1	77	93.448	ENSPCIG00000026887	RBFOX1	100	93.448	Phascolarctos_cinereus
ENSGAGG00000023681	RBFOX1	100	93.147	ENSPPYG00000007079	-	100	93.147	Pongo_abelii
ENSGAGG00000023681	RBFOX1	90	84.921	ENSPCAG00000002630	RBFOX1	100	84.921	Procavia_capensis
ENSGAGG00000023681	RBFOX1	100	92.328	ENSPCOG00000025687	RBFOX1	100	92.105	Propithecus_coquereli
ENSGAGG00000023681	RBFOX1	100	88.756	ENSPVAG00000013467	RBFOX1	100	88.756	Pteropus_vampyrus
ENSGAGG00000023681	RBFOX1	100	82.071	ENSPNAG00000023109	rbfox1	100	86.216	Pygocentrus_nattereri
ENSGAGG00000023681	RBFOX1	100	93.899	ENSRNOG00000002827	Rbfox1	100	91.512	Rattus_norvegicus
ENSGAGG00000023681	RBFOX1	100	94.960	ENSRBIG00000044478	RBFOX1	100	93.899	Rhinopithecus_bieti
ENSGAGG00000023681	RBFOX1	100	92.911	ENSRROG00000044411	RBFOX1	100	92.911	Rhinopithecus_roxellana
ENSGAGG00000023681	RBFOX1	100	94.960	ENSSBOG00000033726	RBFOX1	100	92.658	Saimiri_boliviensis_boliviensis
ENSGAGG00000023681	RBFOX1	100	93.103	ENSSHAG00000009257	RBFOX1	100	89.296	Sarcophilus_harrisii
ENSGAGG00000023681	RBFOX1	87	76.081	ENSSFOG00015009955	-	87	76.081	Scleropages_formosus
ENSGAGG00000023681	RBFOX1	94	77.089	ENSSFOG00015023675	rbfox1	96	88.889	Scleropages_formosus
ENSGAGG00000023681	RBFOX1	100	76.081	ENSSMAG00000015505	rbfox1	96	77.525	Scophthalmus_maximus
ENSGAGG00000023681	RBFOX1	100	75.263	ENSSDUG00000016413	rbfox1	99	80.328	Seriola_dumerili
ENSGAGG00000023681	RBFOX1	89	72.353	ENSSLDG00000009353	rbfox1	93	77.474	Seriola_lalandi_dorsalis
ENSGAGG00000023681	RBFOX1	80	92.994	ENSSPUG00000009732	RBFOX1	87	92.994	Sphenodon_punctatus
ENSGAGG00000023681	RBFOX1	100	77.157	ENSSPAG00000009723	rbfox1	100	80.000	Stegastes_partitus
ENSGAGG00000023681	RBFOX1	100	92.405	ENSSSCG00000007917	RBFOX1	100	94.633	Sus_scrofa
ENSGAGG00000023681	RBFOX1	100	99.204	ENSTGUG00000004562	RBFOX1	100	96.923	Taeniopygia_guttata
ENSGAGG00000023681	RBFOX1	100	77.296	ENSTRUG00000020940	rbfox1	99	80.475	Takifugu_rubripes
ENSGAGG00000023681	RBFOX1	71	57.643	ENSTNIG00000002567	rbfox1	100	62.500	Tetraodon_nigroviridis
ENSGAGG00000023681	RBFOX1	68	97.778	ENSTBEG00000009169	-	63	97.778	Tupaia_belangeri
ENSGAGG00000023681	RBFOX1	100	92.344	ENSTTRG00000005700	RBFOX1	100	92.344	Tursiops_truncatus
ENSGAGG00000023681	RBFOX1	100	89.390	ENSUAMG00000024633	RBFOX1	99	88.718	Ursus_americanus
ENSGAGG00000023681	RBFOX1	100	81.432	ENSUMAG00000003579	RBFOX1	99	80.000	Ursus_maritimus
ENSGAGG00000023681	RBFOX1	81	95.455	ENSVPAG00000001284	RBFOX1	81	95.455	Vicugna_pacos
ENSGAGG00000023681	RBFOX1	100	95.225	ENSVVUG00000017311	RBFOX1	100	92.042	Vulpes_vulpes