EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000024314 (Gene tree)
Gene ID: -
Gene Symbol: PDCD11
Alias: ALG-4|KIAA0185|RRP5
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 43869 bases
Position: chrPPEB01000420.1:449010-492878
Accession: 13408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000034235	Suf	PF05843.14	7.8e-12	1	1
ENSGAGP00000034242	Suf	PF05843.14	7.8e-12	1	1
ENSGAGP00000034235	S1	PF00575.23	1.8e-55	1	3
ENSGAGP00000034235	S1	PF00575.23	1.8e-55	2	3
ENSGAGP00000034235	S1	PF00575.23	1.8e-55	3	3
ENSGAGP00000034242	S1	PF00575.23	1.8e-55	1	3
ENSGAGP00000034242	S1	PF00575.23	1.8e-55	2	3
ENSGAGP00000034242	S1	PF00575.23	1.8e-55	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000038762	PDCD11-201	5488	-	ENSGAGP00000034235	1758 (aa)	-	-
ENSGAGT00000038769	PDCD11-202	5834	-	ENSGAGP00000034242	1758 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000024314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000024314's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000024314	PDCD11	99	58.987	ENSG00000148843	PDCD11	96	59.063	Homo_sapiens
ENSGAGG00000024314	PDCD11	99	47.932	ENSAPOG00000015629	pdcd11	95	47.819	Acanthochromis_polyacanthus
ENSGAGG00000024314	PDCD11	99	59.028	ENSAMEG00000017935	PDCD11	96	59.255	Ailuropoda_melanoleuca
ENSGAGG00000024314	PDCD11	59	45.357	ENSACIG00000006458	-	91	45.595	Amphilophus_citrinellus
ENSGAGG00000024314	PDCD11	99	47.535	ENSAOCG00000015287	pdcd11	95	47.365	Amphiprion_ocellaris
ENSGAGG00000024314	PDCD11	63	47.052	ENSAPEG00000020240	pdcd11	87	47.052	Amphiprion_percula
ENSGAGG00000024314	PDCD11	99	47.482	ENSATEG00000021043	pdcd11	95	47.152	Anabas_testudineus
ENSGAGG00000024314	PDCD11	100	69.385	ENSAPLG00000010301	PDCD11	95	69.149	Anas_platyrhynchos
ENSGAGG00000024314	PDCD11	99	66.724	ENSACAG00000004796	PDCD11	95	66.439	Anolis_carolinensis
ENSGAGG00000024314	PDCD11	99	59.274	ENSANAG00000034576	PDCD11	96	59.385	Aotus_nancymaae
ENSGAGG00000024314	PDCD11	86	64.493	ENSACLG00000018236	pdcd11	96	57.061	Astatotilapia_calliptera
ENSGAGG00000024314	PDCD11	97	44.543	ENSAMXG00000005458	pdcd11	97	44.543	Astyanax_mexicanus
ENSGAGG00000024314	PDCD11	99	59.131	ENSBTAG00000009715	PDCD11	96	59.164	Bos_taurus
ENSGAGG00000024314	PDCD11	99	58.827	ENSCJAG00000018257	PDCD11	96	58.827	Callithrix_jacchus
ENSGAGG00000024314	PDCD11	99	58.716	ENSCAFG00000010411	PDCD11	96	59.197	Canis_familiaris
ENSGAGG00000024314	PDCD11	99	59.573	ENSCAFG00020010369	PDCD11	96	59.582	Canis_lupus_dingo
ENSGAGG00000024314	PDCD11	99	59.020	ENSCHIG00000025218	PDCD11	96	59.354	Capra_hircus
ENSGAGG00000024314	PDCD11	99	57.779	ENSTSYG00000033423	PDCD11	98	57.723	Carlito_syrichta
ENSGAGG00000024314	PDCD11	96	52.198	ENSCAPG00000005386	PDCD11	99	52.198	Cavia_aperea
ENSGAGG00000024314	PDCD11	99	58.923	ENSCPOG00000010957	PDCD11	99	58.418	Cavia_porcellus
ENSGAGG00000024314	PDCD11	99	58.873	ENSCCAG00000018950	PDCD11	96	59.096	Cebus_capucinus
ENSGAGG00000024314	PDCD11	99	59.136	ENSCATG00000044331	PDCD11	96	59.398	Cercocebus_atys
ENSGAGG00000024314	PDCD11	99	58.797	ENSCLAG00000001029	PDCD11	95	58.784	Chinchilla_lanigera
ENSGAGG00000024314	PDCD11	99	59.146	ENSCSAG00000005346	PDCD11	96	59.464	Chlorocebus_sabaeus
ENSGAGG00000024314	PDCD11	79	78.295	ENSCHOG00000004796	PDCD11	80	78.295	Choloepus_hoffmanni
ENSGAGG00000024314	PDCD11	100	85.749	ENSCPBG00000024487	PDCD11	95	93.539	Chrysemys_picta_bellii
ENSGAGG00000024314	PDCD11	99	58.647	ENSCANG00000043300	PDCD11	96	59.129	Colobus_angolensis_palliatus
ENSGAGG00000024314	PDCD11	99	59.249	ENSCGRG00001006458	Pdcd11	96	59.162	Cricetulus_griseus_chok1gshd
ENSGAGG00000024314	PDCD11	99	59.216	ENSCGRG00000003583	Pdcd11	96	59.162	Cricetulus_griseus_crigri
ENSGAGG00000024314	PDCD11	97	47.230	ENSCSEG00000010739	pdcd11	95	47.230	Cynoglossus_semilaevis
ENSGAGG00000024314	PDCD11	94	51.192	ENSCVAG00000018903	pdcd11	95	50.478	Cyprinodon_variegatus
ENSGAGG00000024314	PDCD11	99	45.536	ENSDARG00000052480	pdcd11	95	45.618	Danio_rerio
ENSGAGG00000024314	PDCD11	99	58.347	ENSDNOG00000013838	PDCD11	96	58.621	Dasypus_novemcinctus
ENSGAGG00000024314	PDCD11	99	59.139	ENSDORG00000010420	Pdcd11	95	59.741	Dipodomys_ordii
ENSGAGG00000024314	PDCD11	56	34.112	FBgn0039182	CG5728	57	37.500	Drosophila_melanogaster
ENSGAGG00000024314	PDCD11	97	51.508	ENSETEG00000000813	PDCD11	97	50.928	Echinops_telfairi
ENSGAGG00000024314	PDCD11	75	50.508	ENSEBUG00000002358	-	85	51.748	Eptatretus_burgeri
ENSGAGG00000024314	PDCD11	99	59.677	ENSEASG00005015159	PDCD11	99	59.621	Equus_asinus_asinus
ENSGAGG00000024314	PDCD11	99	59.565	ENSECAG00000020507	PDCD11	96	59.319	Equus_caballus
ENSGAGG00000024314	PDCD11	92	70.588	ENSEEUG00000009245	PDCD11	89	70.588	Erinaceus_europaeus
ENSGAGG00000024314	PDCD11	100	47.282	ENSELUG00000004211	pdcd11	94	46.686	Esox_lucius
ENSGAGG00000024314	PDCD11	99	59.833	ENSFCAG00000002384	PDCD11	96	60.056	Felis_catus
ENSGAGG00000024314	PDCD11	100	68.852	ENSFALG00000008775	PDCD11	95	68.991	Ficedula_albicollis
ENSGAGG00000024314	PDCD11	99	58.082	ENSFDAG00000009532	PDCD11	96	58.194	Fukomys_damarensis
ENSGAGG00000024314	PDCD11	83	64.527	ENSFHEG00000022997	pdcd11	86	66.192	Fundulus_heteroclitus
ENSGAGG00000024314	PDCD11	93	45.037	ENSGMOG00000004186	pdcd11	89	44.789	Gadus_morhua
ENSGAGG00000024314	PDCD11	76	70.818	ENSGALG00000008265	PDCD11	92	70.715	Gallus_gallus
ENSGAGG00000024314	PDCD11	99	46.648	ENSGAFG00000012806	pdcd11	97	50.184	Gambusia_affinis
ENSGAGG00000024314	PDCD11	99	46.292	ENSGACG00000018233	pdcd11	98	57.990	Gasterosteus_aculeatus
ENSGAGG00000024314	PDCD11	99	59.076	ENSGGOG00000011621	PDCD11	96	59.152	Gorilla_gorilla
ENSGAGG00000024314	PDCD11	99	46.538	ENSHBUG00000020226	pdcd11	95	47.079	Haplochromis_burtoni
ENSGAGG00000024314	PDCD11	99	58.291	ENSHGLG00000001462	PDCD11	96	58.212	Heterocephalus_glaber_female
ENSGAGG00000024314	PDCD11	99	57.733	ENSHGLG00100018779	PDCD11	95	57.654	Heterocephalus_glaber_male
ENSGAGG00000024314	PDCD11	100	45.758	ENSHCOG00000016006	pdcd11	95	45.732	Hippocampus_comes
ENSGAGG00000024314	PDCD11	61	44.465	ENSIPUG00000015102	pdcd11	90	46.336	Ictalurus_punctatus
ENSGAGG00000024314	PDCD11	99	59.336	ENSSTOG00000014553	PDCD11	95	59.370	Ictidomys_tridecemlineatus
ENSGAGG00000024314	PDCD11	99	59.640	ENSJJAG00000015523	Pdcd11	95	59.798	Jaculus_jaculus
ENSGAGG00000024314	PDCD11	99	53.178	ENSLOCG00000011818	pdcd11	95	53.235	Lepisosteus_oculatus
ENSGAGG00000024314	PDCD11	99	59.638	ENSLAFG00000008398	PDCD11	95	59.379	Loxodonta_africana
ENSGAGG00000024314	PDCD11	99	58.869	ENSMFAG00000044058	PDCD11	96	59.408	Macaca_fascicularis
ENSGAGG00000024314	PDCD11	99	58.869	ENSMMUG00000007058	PDCD11	96	59.408	Macaca_mulatta
ENSGAGG00000024314	PDCD11	99	59.187	ENSMNEG00000040726	PDCD11	95	59.408	Macaca_nemestrina
ENSGAGG00000024314	PDCD11	99	59.400	ENSMLEG00000040978	PDCD11	95	59.456	Mandrillus_leucophaeus
ENSGAGG00000024314	PDCD11	99	46.879	ENSMAMG00000009572	pdcd11	95	46.686	Mastacembelus_armatus
ENSGAGG00000024314	PDCD11	99	46.481	ENSMZEG00005008949	pdcd11	95	47.022	Maylandia_zebra
ENSGAGG00000024314	PDCD11	100	70.743	ENSMGAG00000010482	PDCD11	96	70.910	Meleagris_gallopavo
ENSGAGG00000024314	PDCD11	94	60.451	ENSMAUG00000014924	Pdcd11	92	60.476	Mesocricetus_auratus
ENSGAGG00000024314	PDCD11	99	59.787	ENSMICG00000012421	PDCD11	95	59.787	Microcebus_murinus
ENSGAGG00000024314	PDCD11	99	58.509	ENSMOCG00000021792	Pdcd11	96	58.621	Microtus_ochrogaster
ENSGAGG00000024314	PDCD11	99	41.944	ENSMMOG00000007572	pdcd11	96	41.579	Mola_mola
ENSGAGG00000024314	PDCD11	100	55.740	ENSMODG00000011077	PDCD11	96	55.519	Monodelphis_domestica
ENSGAGG00000024314	PDCD11	99	40.604	ENSMALG00000003859	pdcd11	92	46.026	Monopterus_albus
ENSGAGG00000024314	PDCD11	99	58.966	MGP_CAROLIEiJ_G0023050	Pdcd11	95	58.810	Mus_caroli
ENSGAGG00000024314	PDCD11	99	58.464	ENSMUSG00000025047	Pdcd11	95	58.576	Mus_musculus
ENSGAGG00000024314	PDCD11	99	58.079	MGP_PahariEiJ_G0014540	Pdcd11	96	58.557	Mus_pahari
ENSGAGG00000024314	PDCD11	99	58.249	MGP_SPRETEiJ_G0023971	Pdcd11	95	58.361	Mus_spretus
ENSGAGG00000024314	PDCD11	99	59.202	ENSMPUG00000016829	PDCD11	96	59.588	Mustela_putorius_furo
ENSGAGG00000024314	PDCD11	99	59.599	ENSMLUG00000004997	PDCD11	96	60.100	Myotis_lucifugus
ENSGAGG00000024314	PDCD11	99	58.393	ENSNGAG00000018143	Pdcd11	96	59.040	Nannospalax_galili
ENSGAGG00000024314	PDCD11	87	53.274	ENSNBRG00000021596	pdcd11	96	52.809	Neolamprologus_brichardi
ENSGAGG00000024314	PDCD11	99	56.728	ENSNLEG00000026700	PDCD11	95	56.864	Nomascus_leucogenys
ENSGAGG00000024314	PDCD11	69	78.070	ENSMEUG00000013719	-	66	78.070	Notamacropus_eugenii
ENSGAGG00000024314	PDCD11	99	56.903	ENSOPRG00000010593	PDCD11	95	56.847	Ochotona_princeps
ENSGAGG00000024314	PDCD11	99	57.778	ENSODEG00000008079	PDCD11	95	57.778	Octodon_degus
ENSGAGG00000024314	PDCD11	99	46.682	ENSONIG00000018835	pdcd11	95	47.022	Oreochromis_niloticus
ENSGAGG00000024314	PDCD11	99	59.257	ENSOANG00000001636	-	95	59.257	Ornithorhynchus_anatinus
ENSGAGG00000024314	PDCD11	99	58.661	ENSOCUG00000006312	PDCD11	95	58.863	Oryctolagus_cuniculus
ENSGAGG00000024314	PDCD11	100	47.819	ENSORLG00020003642	pdcd11	95	47.819	Oryzias_latipes_hni
ENSGAGG00000024314	PDCD11	100	47.592	ENSORLG00015001618	pdcd11	95	47.649	Oryzias_latipes_hsok
ENSGAGG00000024314	PDCD11	79	49.044	ENSOMEG00000010904	pdcd11	98	48.799	Oryzias_melastigma
ENSGAGG00000024314	PDCD11	99	59.220	ENSOGAG00000008683	PDCD11	96	59.017	Otolemur_garnettii
ENSGAGG00000024314	PDCD11	99	58.853	ENSOARG00000003719	PDCD11	96	58.964	Ovis_aries
ENSGAGG00000024314	PDCD11	99	57.812	ENSPPAG00000024593	PDCD11	95	58.660	Pan_paniscus
ENSGAGG00000024314	PDCD11	100	60.022	ENSPPRG00000015133	PDCD11	96	60.134	Panthera_pardus
ENSGAGG00000024314	PDCD11	99	60.000	ENSPTIG00000011433	PDCD11	96	60.111	Panthera_tigris_altaica
ENSGAGG00000024314	PDCD11	99	58.984	ENSPTRG00000002911	PDCD11	96	59.040	Pan_troglodytes
ENSGAGG00000024314	PDCD11	99	59.091	ENSPANG00000020959	PDCD11	96	59.352	Papio_anubis
ENSGAGG00000024314	PDCD11	99	47.861	ENSPKIG00000000973	pdcd11	95	47.592	Paramormyrops_kingsleyae
ENSGAGG00000024314	PDCD11	77	83.900	ENSPSIG00000005102	PDCD11	90	83.900	Pelodiscus_sinensis
ENSGAGG00000024314	PDCD11	68	61.514	ENSPMGG00000007289	pdcd11	86	64.460	Periophthalmus_magnuspinnatus
ENSGAGG00000024314	PDCD11	99	58.403	ENSPEMG00000010315	Pdcd11	95	58.850	Peromyscus_maniculatus_bairdii
ENSGAGG00000024314	PDCD11	99	43.385	ENSPMAG00000003098	pdcd11	95	43.437	Petromyzon_marinus
ENSGAGG00000024314	PDCD11	100	58.778	ENSPCIG00000001118	PDCD11	96	58.657	Phascolarctos_cinereus
ENSGAGG00000024314	PDCD11	99	47.814	ENSPFOG00000006012	pdcd11	98	47.503	Poecilia_formosa
ENSGAGG00000024314	PDCD11	99	45.152	ENSPLAG00000014494	pdcd11	96	44.438	Poecilia_latipinna
ENSGAGG00000024314	PDCD11	94	55.699	ENSPMEG00000018177	pdcd11	94	53.488	Poecilia_mexicana
ENSGAGG00000024314	PDCD11	99	48.136	ENSPREG00000000475	pdcd11	95	47.824	Poecilia_reticulata
ENSGAGG00000024314	PDCD11	99	56.692	ENSPPYG00000002621	PDCD11	95	56.931	Pongo_abelii
ENSGAGG00000024314	PDCD11	71	57.407	ENSPCAG00000011663	PDCD11	66	61.568	Procavia_capensis
ENSGAGG00000024314	PDCD11	99	55.752	ENSPCOG00000023327	PDCD11	95	55.752	Propithecus_coquereli
ENSGAGG00000024314	PDCD11	99	58.561	ENSPVAG00000004176	PDCD11	96	58.561	Pteropus_vampyrus
ENSGAGG00000024314	PDCD11	99	46.538	ENSPNYG00000003979	pdcd11	95	47.079	Pundamilia_nyererei
ENSGAGG00000024314	PDCD11	99	46.372	ENSPNAG00000017225	pdcd11	100	46.599	Pygocentrus_nattereri
ENSGAGG00000024314	PDCD11	99	58.565	ENSRNOG00000020304	Pdcd11	95	58.742	Rattus_norvegicus
ENSGAGG00000024314	PDCD11	99	58.647	ENSRBIG00000011889	PDCD11	96	59.185	Rhinopithecus_bieti
ENSGAGG00000024314	PDCD11	99	58.703	ENSRROG00000030483	PDCD11	96	59.241	Rhinopithecus_roxellana
ENSGAGG00000024314	PDCD11	90	46.595	YMR229C	-	88	46.595	Saccharomyces_cerevisiae
ENSGAGG00000024314	PDCD11	99	62.613	ENSSBOG00000030308	PDCD11	95	62.613	Saimiri_boliviensis_boliviensis
ENSGAGG00000024314	PDCD11	100	57.865	ENSSHAG00000018258	PDCD11	96	57.795	Sarcophilus_harrisii
ENSGAGG00000024314	PDCD11	99	49.915	ENSSFOG00015003881	pdcd11	95	49.489	Scleropages_formosus
ENSGAGG00000024314	PDCD11	99	47.705	ENSSMAG00000006612	pdcd11	95	47.592	Scophthalmus_maximus
ENSGAGG00000024314	PDCD11	96	47.754	ENSSDUG00000021302	pdcd11	97	46.588	Seriola_dumerili
ENSGAGG00000024314	PDCD11	75	74.545	ENSSARG00000002540	PDCD11	66	74.545	Sorex_araneus
ENSGAGG00000024314	PDCD11	97	46.725	ENSSPAG00000017558	pdcd11	95	46.635	Stegastes_partitus
ENSGAGG00000024314	PDCD11	99	59.933	ENSSSCG00000010599	PDCD11	99	59.812	Sus_scrofa
ENSGAGG00000024314	PDCD11	69	44.856	ENSTRUG00000014291	pdcd11	94	44.856	Takifugu_rubripes
ENSGAGG00000024314	PDCD11	99	46.611	ENSTNIG00000012085	pdcd11	96	46.555	Tetraodon_nigroviridis
ENSGAGG00000024314	PDCD11	99	56.811	ENSTBEG00000001893	PDCD11	95	57.063	Tupaia_belangeri
ENSGAGG00000024314	PDCD11	98	58.338	ENSTTRG00000003356	PDCD11	93	58.110	Tursiops_truncatus
ENSGAGG00000024314	PDCD11	99	59.533	ENSUAMG00000018015	PDCD11	96	59.700	Ursus_americanus
ENSGAGG00000024314	PDCD11	99	58.450	ENSUMAG00000023567	PDCD11	96	57.737	Ursus_maritimus
ENSGAGG00000024314	PDCD11	72	68.627	ENSVPAG00000007405	PDCD11	77	68.627	Vicugna_pacos
ENSGAGG00000024314	PDCD11	99	59.058	ENSVVUG00000004457	PDCD11	96	59.431	Vulpes_vulpes
ENSGAGG00000024314	PDCD11	100	54.566	ENSXETG00000009482	pdcd11	95	54.697	Xenopus_tropicalis
ENSGAGG00000024314	PDCD11	99	41.686	ENSXCOG00000012420	pdcd11	91	48.071	Xiphophorus_couchianus
ENSGAGG00000024314	PDCD11	99	48.043	ENSXMAG00000004638	pdcd11	95	47.348	Xiphophorus_maculatus