EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000024411 (Gene tree)
Gene ID: -
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 33140 bases
Position: chrPPEB01002776.1:1022-34161
Accession: 18676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000034355	ResIII	PF04851.15	1.5e-06	1	1
ENSGAGP00000034358	ResIII	PF04851.15	1.5e-06	1	1
ENSGAGP00000034360	ResIII	PF04851.15	1.5e-06	1	1
ENSGAGP00000034355	DEAD	PF00270.29	1.7e-49	1	1
ENSGAGP00000034358	DEAD	PF00270.29	1.7e-49	1	1
ENSGAGP00000034360	DEAD	PF00270.29	1.7e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000038897	DDX42-201	4625	-	ENSGAGP00000034355	953 (aa)	-	-
ENSGAGT00000038902	DDX42-203	4954	-	ENSGAGP00000034360	953 (aa)	-	-
ENSGAGT00000038900	DDX42-202	4625	-	ENSGAGP00000034358	953 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000024411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000024411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000024411	DDX42	52	41.667	ENSGAGG00000014910	DDX46	54	40.317

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000024411	DDX42	99	83.229	ENSG00000198231	DDX42	100	91.346	Homo_sapiens
ENSGAGG00000024411	DDX42	95	71.003	ENSAPOG00000017675	ddx42	99	71.979	Acanthochromis_polyacanthus
ENSGAGG00000024411	DDX42	99	85.026	ENSAMEG00000003200	DDX42	100	85.236	Ailuropoda_melanoleuca
ENSGAGG00000024411	DDX42	84	69.888	ENSACIG00000007376	ddx42	99	72.682	Amphilophus_citrinellus
ENSGAGG00000024411	DDX42	99	71.744	ENSAOCG00000003520	ddx42	99	72.871	Amphiprion_ocellaris
ENSGAGG00000024411	DDX42	99	71.368	ENSAPEG00000000984	ddx42	99	72.632	Amphiprion_percula
ENSGAGG00000024411	DDX42	99	71.533	ENSATEG00000022920	ddx42	99	72.537	Anabas_testudineus
ENSGAGG00000024411	DDX42	99	87.447	ENSAPLG00000010544	DDX42	100	87.447	Anas_platyrhynchos
ENSGAGG00000024411	DDX42	99	85.104	ENSACAG00000003994	DDX42	99	85.236	Anolis_carolinensis
ENSGAGG00000024411	DDX42	99	83.945	ENSANAG00000035693	DDX42	99	86.986	Aotus_nancymaae
ENSGAGG00000024411	DDX42	89	76.230	ENSACLG00000025113	ddx42	99	73.795	Astatotilapia_calliptera
ENSGAGG00000024411	DDX42	76	80.933	ENSAMXG00000011435	ddx42	99	69.191	Astyanax_mexicanus
ENSGAGG00000024411	DDX42	99	83.039	ENSBTAG00000021058	DDX42	97	90.000	Bos_taurus
ENSGAGG00000024411	DDX42	62	53.145	WBGene00008119	C46F11.4	79	52.778	Caenorhabditis_elegans
ENSGAGG00000024411	DDX42	99	84.100	ENSCJAG00000019649	DDX42	99	92.218	Callithrix_jacchus
ENSGAGG00000024411	DDX42	99	82.902	ENSCAFG00000012818	DDX42	100	84.906	Canis_familiaris
ENSGAGG00000024411	DDX42	99	83.005	ENSCAFG00020026631	DDX42	100	85.010	Canis_lupus_dingo
ENSGAGG00000024411	DDX42	99	83.663	ENSCHIG00000014431	DDX42	100	84.864	Capra_hircus
ENSGAGG00000024411	DDX42	99	82.851	ENSTSYG00000001380	DDX42	100	84.326	Carlito_syrichta
ENSGAGG00000024411	DDX42	72	70.219	ENSCAPG00000013621	DDX42	94	70.219	Cavia_aperea
ENSGAGG00000024411	DDX42	99	83.577	ENSCPOG00000005633	DDX42	100	84.050	Cavia_porcellus
ENSGAGG00000024411	DDX42	99	79.436	ENSCCAG00000020612	DDX42	97	89.078	Cebus_capucinus
ENSGAGG00000024411	DDX42	99	84.211	ENSCATG00000030490	DDX42	100	84.260	Cercocebus_atys
ENSGAGG00000024411	DDX42	99	84.293	ENSCLAG00000003497	DDX42	100	84.293	Chinchilla_lanigera
ENSGAGG00000024411	DDX42	99	79.564	ENSCSAG00000003914	DDX42	100	80.582	Chlorocebus_sabaeus
ENSGAGG00000024411	DDX42	75	91.071	ENSCHOG00000006241	DDX42	75	96.154	Choloepus_hoffmanni
ENSGAGG00000024411	DDX42	100	98.639	ENSCPBG00000026682	DDX42	100	98.639	Chrysemys_picta_bellii
ENSGAGG00000024411	DDX42	99	84.211	ENSCANG00000034663	DDX42	97	91.016	Colobus_angolensis_palliatus
ENSGAGG00000024411	DDX42	99	83.854	ENSCGRG00001009775	Ddx42	100	84.503	Cricetulus_griseus_chok1gshd
ENSGAGG00000024411	DDX42	99	83.854	ENSCGRG00000011718	Ddx42	100	84.503	Cricetulus_griseus_crigri
ENSGAGG00000024411	DDX42	89	74.413	ENSCSEG00000021574	ddx42	99	71.203	Cynoglossus_semilaevis
ENSGAGG00000024411	DDX42	99	69.863	ENSCVAG00000011404	ddx42	99	71.941	Cyprinodon_variegatus
ENSGAGG00000024411	DDX42	99	70.890	ENSDARG00000037928	ddx42	99	71.251	Danio_rerio
ENSGAGG00000024411	DDX42	99	78.008	ENSDNOG00000007961	DDX42	100	80.168	Dasypus_novemcinctus
ENSGAGG00000024411	DDX42	99	77.164	ENSDORG00000004199	Ddx42	100	76.642	Dipodomys_ordii
ENSGAGG00000024411	DDX42	64	60.835	FBgn0036104	CG6418	84	58.533	Drosophila_melanogaster
ENSGAGG00000024411	DDX42	82	70.992	ENSEBUG00000001155	ddx42	94	70.581	Eptatretus_burgeri
ENSGAGG00000024411	DDX42	99	83.246	ENSEASG00005013089	DDX42	99	89.873	Equus_asinus_asinus
ENSGAGG00000024411	DDX42	99	82.622	ENSECAG00000022684	DDX42	100	85.236	Equus_caballus
ENSGAGG00000024411	DDX42	57	92.534	ENSEEUG00000009144	DDX42	73	100.000	Erinaceus_europaeus
ENSGAGG00000024411	DDX42	99	69.583	ENSELUG00000020593	ddx42	100	70.000	Esox_lucius
ENSGAGG00000024411	DDX42	99	83.107	ENSFCAG00000003499	DDX42	100	85.325	Felis_catus
ENSGAGG00000024411	DDX42	95	83.479	ENSFALG00000004675	DDX42	88	82.721	Ficedula_albicollis
ENSGAGG00000024411	DDX42	99	83.942	ENSFDAG00000020516	DDX42	100	84.359	Fukomys_damarensis
ENSGAGG00000024411	DDX42	99	69.506	ENSFHEG00000023290	ddx42	99	70.860	Fundulus_heteroclitus
ENSGAGG00000024411	DDX42	74	76.869	ENSGMOG00000004595	ddx42	88	76.869	Gadus_morhua
ENSGAGG00000024411	DDX42	99	86.653	ENSGALG00000000581	DDX42	100	87.147	Gallus_gallus
ENSGAGG00000024411	DDX42	93	72.545	ENSGAFG00000011846	ddx42	96	73.985	Gambusia_affinis
ENSGAGG00000024411	DDX42	99	66.910	ENSGACG00000009782	ddx42	99	67.405	Gasterosteus_aculeatus
ENSGAGG00000024411	DDX42	99	84.332	ENSGGOG00000006779	DDX42	97	89.220	Gorilla_gorilla
ENSGAGG00000024411	DDX42	89	76.230	ENSHBUG00000008705	ddx42	99	73.795	Haplochromis_burtoni
ENSGAGG00000024411	DDX42	99	80.021	ENSHGLG00000010024	DDX42	100	80.021	Heterocephalus_glaber_female
ENSGAGG00000024411	DDX42	93	64.246	ENSHGLG00100007138	-	95	63.911	Heterocephalus_glaber_male
ENSGAGG00000024411	DDX42	99	82.798	ENSHGLG00100004479	-	100	84.696	Heterocephalus_glaber_male
ENSGAGG00000024411	DDX42	82	79.103	ENSHCOG00000003357	ddx42	91	79.257	Hippocampus_comes
ENSGAGG00000024411	DDX42	78	79.128	ENSIPUG00000013327	ddx42	100	68.828	Ictalurus_punctatus
ENSGAGG00000024411	DDX42	99	84.623	ENSSTOG00000008922	DDX42	100	84.623	Ictidomys_tridecemlineatus
ENSGAGG00000024411	DDX42	99	83.682	ENSJJAG00000011727	Ddx42	100	83.787	Jaculus_jaculus
ENSGAGG00000024411	DDX42	99	65.768	ENSKMAG00000009914	ddx42	99	71.862	Kryptolebias_marmoratus
ENSGAGG00000024411	DDX42	79	75.553	ENSLBEG00000004687	ddx42	99	67.718	Labrus_bergylta
ENSGAGG00000024411	DDX42	99	74.367	ENSLACG00000013476	DDX42	97	76.899	Latimeria_chalumnae
ENSGAGG00000024411	DDX42	99	74.921	ENSLOCG00000011764	ddx42	100	75.264	Lepisosteus_oculatus
ENSGAGG00000024411	DDX42	99	83.945	ENSLAFG00000003249	DDX42	100	84.801	Loxodonta_africana
ENSGAGG00000024411	DDX42	99	84.211	ENSMFAG00000031356	DDX42	100	84.155	Macaca_fascicularis
ENSGAGG00000024411	DDX42	99	84.388	ENSMMUG00000016762	DDX42	96	89.062	Macaca_mulatta
ENSGAGG00000024411	DDX42	99	84.211	ENSMNEG00000038250	DDX42	100	84.155	Macaca_nemestrina
ENSGAGG00000024411	DDX42	99	83.107	ENSMLEG00000043080	DDX42	100	84.134	Mandrillus_leucophaeus
ENSGAGG00000024411	DDX42	89	76.263	ENSMAMG00000021888	ddx42	98	72.899	Mastacembelus_armatus
ENSGAGG00000024411	DDX42	89	76.230	ENSMZEG00005023103	ddx42	99	73.795	Maylandia_zebra
ENSGAGG00000024411	DDX42	99	87.147	ENSMGAG00000001822	DDX42	100	87.670	Meleagris_gallopavo
ENSGAGG00000024411	DDX42	76	88.493	ENSMAUG00000020774	-	94	88.493	Mesocricetus_auratus
ENSGAGG00000024411	DDX42	99	83.891	ENSMICG00000009952	DDX42	100	83.368	Microcebus_murinus
ENSGAGG00000024411	DDX42	99	84.067	ENSMOCG00000015504	Ddx42	100	84.067	Microtus_ochrogaster
ENSGAGG00000024411	DDX42	88	72.104	ENSMMOG00000016963	ddx42	87	70.862	Mola_mola
ENSGAGG00000024411	DDX42	99	70.750	ENSMALG00000007800	ddx42	99	72.287	Monopterus_albus
ENSGAGG00000024411	DDX42	99	83.455	MGP_CAROLIEiJ_G0017314	Ddx42	100	84.100	Mus_caroli
ENSGAGG00000024411	DDX42	99	83.247	ENSMUSG00000020705	Ddx42	100	83.996	Mus_musculus
ENSGAGG00000024411	DDX42	71	94.651	MGP_PahariEiJ_G0018444	-	94	94.895	Mus_pahari
ENSGAGG00000024411	DDX42	99	83.455	MGP_SPRETEiJ_G0018158	Ddx42	100	84.100	Mus_spretus
ENSGAGG00000024411	DDX42	99	83.770	ENSMPUG00000014921	DDX42	100	84.583	Mustela_putorius_furo
ENSGAGG00000024411	DDX42	99	84.336	ENSMLUG00000011645	DDX42	100	84.568	Myotis_lucifugus
ENSGAGG00000024411	DDX42	99	85.084	ENSNGAG00000021897	Ddx42	100	84.874	Nannospalax_galili
ENSGAGG00000024411	DDX42	89	74.678	ENSNBRG00000004466	ddx42	99	72.403	Neolamprologus_brichardi
ENSGAGG00000024411	DDX42	99	84.122	ENSNLEG00000004248	DDX42	99	89.078	Nomascus_leucogenys
ENSGAGG00000024411	DDX42	74	79.862	ENSMEUG00000013227	-	85	79.862	Notamacropus_eugenii
ENSGAGG00000024411	DDX42	99	82.917	ENSOPRG00000014960	DDX42	100	83.925	Ochotona_princeps
ENSGAGG00000024411	DDX42	99	80.878	ENSODEG00000007810	DDX42	100	80.878	Octodon_degus
ENSGAGG00000024411	DDX42	89	76.202	ENSONIG00000000734	ddx42	99	73.662	Oreochromis_niloticus
ENSGAGG00000024411	DDX42	57	91.466	ENSOANG00000000265	DDX42	100	91.466	Ornithorhynchus_anatinus
ENSGAGG00000024411	DDX42	94	86.222	ENSOCUG00000004304	DDX42	87	86.681	Oryctolagus_cuniculus
ENSGAGG00000024411	DDX42	99	71.188	ENSORLG00000002395	ddx42	100	70.168	Oryzias_latipes
ENSGAGG00000024411	DDX42	99	71.534	ENSORLG00020011621	ddx42	100	72.871	Oryzias_latipes_hni
ENSGAGG00000024411	DDX42	99	71.744	ENSORLG00015004487	ddx42	100	73.081	Oryzias_latipes_hsok
ENSGAGG00000024411	DDX42	99	71.083	ENSOMEG00000020093	ddx42	100	72.956	Oryzias_melastigma
ENSGAGG00000024411	DDX42	99	82.766	ENSOGAG00000006872	DDX42	100	84.134	Otolemur_garnettii
ENSGAGG00000024411	DDX42	99	83.005	ENSOARG00000013540	DDX42	100	84.232	Ovis_aries
ENSGAGG00000024411	DDX42	99	84.227	ENSPPAG00000007496	DDX42	97	89.000	Pan_paniscus
ENSGAGG00000024411	DDX42	99	83.212	ENSPPRG00000002740	DDX42	100	85.430	Panthera_pardus
ENSGAGG00000024411	DDX42	99	82.766	ENSPTIG00000009932	DDX42	100	85.325	Panthera_tigris_altaica
ENSGAGG00000024411	DDX42	99	84.227	ENSPTRG00000009523	DDX42	97	89.000	Pan_troglodytes
ENSGAGG00000024411	DDX42	99	84.105	ENSPANG00000020990	DDX42	100	84.155	Papio_anubis
ENSGAGG00000024411	DDX42	78	81.491	ENSPKIG00000002901	ddx42	100	68.822	Paramormyrops_kingsleyae
ENSGAGG00000024411	DDX42	85	95.995	ENSPSIG00000010289	DDX42	100	95.995	Pelodiscus_sinensis
ENSGAGG00000024411	DDX42	99	67.334	ENSPMGG00000009323	ddx42	100	68.658	Periophthalmus_magnuspinnatus
ENSGAGG00000024411	DDX42	99	84.046	ENSPEMG00000006755	Ddx42	100	84.696	Peromyscus_maniculatus_bairdii
ENSGAGG00000024411	DDX42	78	72.346	ENSPMAG00000005580	ddx42	100	73.263	Petromyzon_marinus
ENSGAGG00000024411	DDX42	99	84.703	ENSPCIG00000009093	DDX42	100	84.807	Phascolarctos_cinereus
ENSGAGG00000024411	DDX42	99	71.113	ENSPFOG00000014104	ddx42	99	72.332	Poecilia_formosa
ENSGAGG00000024411	DDX42	99	71.113	ENSPLAG00000010522	ddx42	99	72.332	Poecilia_latipinna
ENSGAGG00000024411	DDX42	99	70.509	ENSPMEG00000010744	ddx42	99	71.649	Poecilia_mexicana
ENSGAGG00000024411	DDX42	99	69.413	ENSPREG00000009926	ddx42	99	70.918	Poecilia_reticulata
ENSGAGG00000024411	DDX42	99	81.497	ENSPPYG00000008531	DDX42	100	81.790	Pongo_abelii
ENSGAGG00000024411	DDX42	91	77.146	ENSPCAG00000002474	DDX42	100	79.819	Procavia_capensis
ENSGAGG00000024411	DDX42	99	73.188	ENSPCOG00000001559	DDX42	98	80.959	Propithecus_coquereli
ENSGAGG00000024411	DDX42	99	82.075	ENSPVAG00000000160	DDX42	100	82.322	Pteropus_vampyrus
ENSGAGG00000024411	DDX42	74	73.980	ENSPNYG00000013954	ddx42	97	70.988	Pundamilia_nyererei
ENSGAGG00000024411	DDX42	79	77.091	ENSPNAG00000017352	ddx42	99	68.566	Pygocentrus_nattereri
ENSGAGG00000024411	DDX42	99	83.663	ENSRNOG00000009474	Ddx42	100	84.310	Rattus_norvegicus
ENSGAGG00000024411	DDX42	99	84.211	ENSRBIG00000004781	DDX42	97	91.016	Rhinopithecus_bieti
ENSGAGG00000024411	DDX42	99	84.211	ENSRROG00000029794	DDX42	100	84.260	Rhinopithecus_roxellana
ENSGAGG00000024411	DDX42	99	84.205	ENSSBOG00000029624	DDX42	97	89.220	Saimiri_boliviensis_boliviensis
ENSGAGG00000024411	DDX42	71	57.872	ENSSHAG00000007919	-	99	57.872	Sarcophilus_harrisii
ENSGAGG00000024411	DDX42	99	84.912	ENSSHAG00000012896	-	100	85.536	Sarcophilus_harrisii
ENSGAGG00000024411	DDX42	79	81.866	ENSSFOG00015014064	ddx42	81	81.997	Scleropages_formosus
ENSGAGG00000024411	DDX42	99	70.978	ENSSMAG00000009077	ddx42	98	73.130	Scophthalmus_maximus
ENSGAGG00000024411	DDX42	99	70.785	ENSSDUG00000022221	ddx42	99	72.025	Seriola_dumerili
ENSGAGG00000024411	DDX42	99	70.433	ENSSLDG00000018483	ddx42	99	70.903	Seriola_lalandi_dorsalis
ENSGAGG00000024411	DDX42	99	83.631	ENSSARG00000009847	DDX42	100	84.486	Sorex_araneus
ENSGAGG00000024411	DDX42	99	89.463	ENSSPUG00000018806	DDX42	100	89.463	Sphenodon_punctatus
ENSGAGG00000024411	DDX42	89	75.174	ENSSPAG00000013055	ddx42	99	72.766	Stegastes_partitus
ENSGAGG00000024411	DDX42	85	80.833	ENSSSCG00000017289	DDX42	97	82.930	Sus_scrofa
ENSGAGG00000024411	DDX42	99	85.266	ENSTGUG00000001931	DDX42	100	85.162	Taeniopygia_guttata
ENSGAGG00000024411	DDX42	99	69.579	ENSTRUG00000010711	ddx42	99	82.000	Takifugu_rubripes
ENSGAGG00000024411	DDX42	80	88.699	ENSTBEG00000010159	DDX42	100	88.699	Tupaia_belangeri
ENSGAGG00000024411	DDX42	99	84.062	ENSTTRG00000006962	DDX42	100	84.833	Tursiops_truncatus
ENSGAGG00000024411	DDX42	99	85.026	ENSUAMG00000007321	DDX42	100	85.236	Ursus_americanus
ENSGAGG00000024411	DDX42	99	84.858	ENSUMAG00000017438	DDX42	100	85.068	Ursus_maritimus
ENSGAGG00000024411	DDX42	99	73.581	ENSVPAG00000009633	DDX42	100	75.497	Vicugna_pacos
ENSGAGG00000024411	DDX42	99	82.663	ENSVVUG00000006095	DDX42	100	85.220	Vulpes_vulpes
ENSGAGG00000024411	DDX42	99	77.131	ENSXETG00000003245	ddx42	100	77.131	Xenopus_tropicalis
ENSGAGG00000024411	DDX42	84	70.668	ENSXCOG00000017560	ddx42	97	71.588	Xiphophorus_couchianus
ENSGAGG00000024411	DDX42	99	71.218	ENSXMAG00000008138	ddx42	99	72.316	Xiphophorus_maculatus