EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000024848 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 372 bases
Position: chrPPEB01002801.1:75466-75837
Accession: 17562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000034954	LSM	PF01423.22	8.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000039578	LSM10-201	372	-	ENSGAGP00000034954	123 (aa)	-	UPI000388C512

Gene Model

Click here to download ENSGAGG00000024848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000024848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000024848	LSM10	56	31.429	ENSGAGG00000017812	LSM4	51	31.429
ENSGAGG00000024848	LSM10	60	32.432	ENSGAGG00000011197	SNRPD1	84	30.476
ENSGAGG00000024848	LSM10	57	31.507	ENSGAGG00000012458	LSM2	77	31.507

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000024848	LSM10	100	72.358	ENSG00000181817	LSM10	100	72.358	Homo_sapiens
ENSGAGG00000024848	LSM10	100	72.358	ENSAMEG00000019854	LSM10	100	72.358	Ailuropoda_melanoleuca
ENSGAGG00000024848	LSM10	92	67.257	ENSACIG00000015420	oscp1a	75	67.257	Amphilophus_citrinellus
ENSGAGG00000024848	LSM10	92	67.257	ENSAOCG00000014654	-	93	67.257	Amphiprion_ocellaris
ENSGAGG00000024848	LSM10	96	61.017	ENSAOCG00000015607	LSM10	91	61.017	Amphiprion_ocellaris
ENSGAGG00000024848	LSM10	92	67.257	ENSAOCG00000015618	LSM10	93	67.257	Amphiprion_ocellaris
ENSGAGG00000024848	LSM10	92	67.257	ENSAPEG00000021845	-	93	67.257	Amphiprion_percula
ENSGAGG00000024848	LSM10	96	61.017	ENSAPEG00000021851	LSM10	91	61.017	Amphiprion_percula
ENSGAGG00000024848	LSM10	94	62.931	ENSATEG00000006310	oscp1a	86	62.931	Anabas_testudineus
ENSGAGG00000024848	LSM10	100	73.171	ENSACAG00000001231	LSM10	100	73.171	Anolis_carolinensis
ENSGAGG00000024848	LSM10	100	73.171	ENSANAG00000018759	-	100	73.171	Aotus_nancymaae
ENSGAGG00000024848	LSM10	97	73.109	ENSANAG00000031489	-	98	73.109	Aotus_nancymaae
ENSGAGG00000024848	LSM10	94	63.793	ENSACLG00000004728	oscp1a	94	63.793	Astatotilapia_calliptera
ENSGAGG00000024848	LSM10	93	69.298	ENSAMXG00000025301	oscp1a	94	69.298	Astyanax_mexicanus
ENSGAGG00000024848	LSM10	97	75.630	ENSBTAG00000024096	LSM10	98	75.630	Bos_taurus
ENSGAGG00000024848	LSM10	100	72.358	ENSCJAG00000044880	LSM10	100	72.358	Callithrix_jacchus
ENSGAGG00000024848	LSM10	100	72.358	ENSCAFG00000003382	LSM10	100	72.358	Canis_familiaris
ENSGAGG00000024848	LSM10	100	72.358	ENSCAFG00020008920	LSM10	100	72.358	Canis_lupus_dingo
ENSGAGG00000024848	LSM10	97	75.630	ENSCHIG00000009398	LSM10	98	75.630	Capra_hircus
ENSGAGG00000024848	LSM10	100	73.171	ENSCAPG00000012567	LSM10	100	73.171	Cavia_aperea
ENSGAGG00000024848	LSM10	100	73.171	ENSCPOG00000039302	LSM10	100	73.171	Cavia_porcellus
ENSGAGG00000024848	LSM10	100	73.171	ENSCCAG00000018913	-	100	73.171	Cebus_capucinus
ENSGAGG00000024848	LSM10	97	72.269	ENSCCAG00000008378	-	97	72.269	Cebus_capucinus
ENSGAGG00000024848	LSM10	100	72.358	ENSCATG00000006589	LSM10	100	72.358	Cercocebus_atys
ENSGAGG00000024848	LSM10	100	73.171	ENSCLAG00000008633	LSM10	100	73.171	Chinchilla_lanigera
ENSGAGG00000024848	LSM10	100	72.358	ENSCSAG00000000134	LSM10	100	72.358	Chlorocebus_sabaeus
ENSGAGG00000024848	LSM10	100	72.800	ENSCHOG00000008615	LSM10	100	72.800	Choloepus_hoffmanni
ENSGAGG00000024848	LSM10	78	31.250	ENSCSAVG00000001896	-	82	31.250	Ciona_savignyi
ENSGAGG00000024848	LSM10	100	72.358	ENSCANG00000019928	LSM10	100	72.358	Colobus_angolensis_palliatus
ENSGAGG00000024848	LSM10	98	73.554	ENSCGRG00001004317	-	99	73.554	Cricetulus_griseus_chok1gshd
ENSGAGG00000024848	LSM10	93	64.957	ENSCGRG00001022673	-	94	64.957	Cricetulus_griseus_chok1gshd
ENSGAGG00000024848	LSM10	93	64.957	ENSCGRG00000015514	-	94	64.957	Cricetulus_griseus_crigri
ENSGAGG00000024848	LSM10	98	73.554	ENSCGRG00000014935	-	99	73.554	Cricetulus_griseus_crigri
ENSGAGG00000024848	LSM10	93	62.609	ENSCSEG00000010374	oscp1a	77	62.609	Cynoglossus_semilaevis
ENSGAGG00000024848	LSM10	93	62.609	ENSCVAG00000001536	oscp1a	87	62.609	Cyprinodon_variegatus
ENSGAGG00000024848	LSM10	69	72.941	ENSDARG00000109563	CABZ01074453.1	99	72.941	Danio_rerio
ENSGAGG00000024848	LSM10	98	67.769	ENSDARG00000101222	oscp1a	100	67.769	Danio_rerio
ENSGAGG00000024848	LSM10	99	74.590	ENSDNOG00000036662	LSM10	99	74.590	Dasypus_novemcinctus
ENSGAGG00000024848	LSM10	100	73.171	ENSDORG00000007579	Lsm10	100	73.171	Dipodomys_ordii
ENSGAGG00000024848	LSM10	100	73.984	ENSETEG00000005703	LSM10	100	73.984	Echinops_telfairi
ENSGAGG00000024848	LSM10	94	50.000	ENSEBUG00000001312	oscp1a	95	50.000	Eptatretus_burgeri
ENSGAGG00000024848	LSM10	100	73.171	ENSEASG00005012194	LSM10	100	73.171	Equus_asinus_asinus
ENSGAGG00000024848	LSM10	100	73.171	ENSECAG00000005071	LSM10	100	73.171	Equus_caballus
ENSGAGG00000024848	LSM10	100	72.358	ENSEEUG00000012032	LSM10	100	72.358	Erinaceus_europaeus
ENSGAGG00000024848	LSM10	95	68.376	ENSELUG00000007452	oscp1a	96	68.376	Esox_lucius
ENSGAGG00000024848	LSM10	100	81.301	ENSFALG00000000851	LSM10	100	81.301	Ficedula_albicollis
ENSGAGG00000024848	LSM10	100	73.171	ENSFDAG00000021056	LSM10	100	73.171	Fukomys_damarensis
ENSGAGG00000024848	LSM10	89	66.364	ENSFHEG00000001058	oscp1a	95	66.364	Fundulus_heteroclitus
ENSGAGG00000024848	LSM10	93	66.957	ENSGMOG00000019832	oscp1a	96	66.957	Gadus_morhua
ENSGAGG00000024848	LSM10	100	84.553	ENSGALG00000002127	LSM10	100	84.553	Gallus_gallus
ENSGAGG00000024848	LSM10	94	58.824	ENSGAFG00000016445	oscp1a	95	58.824	Gambusia_affinis
ENSGAGG00000024848	LSM10	95	61.538	ENSGACG00000002329	oscp1a	96	61.538	Gasterosteus_aculeatus
ENSGAGG00000024848	LSM10	100	72.358	ENSGGOG00000003556	LSM10	100	72.358	Gorilla_gorilla
ENSGAGG00000024848	LSM10	94	63.793	ENSHBUG00000001722	oscp1a	94	63.793	Haplochromis_burtoni
ENSGAGG00000024848	LSM10	100	71.545	ENSHGLG00000011625	LSM10	100	71.545	Heterocephalus_glaber_female
ENSGAGG00000024848	LSM10	100	71.545	ENSHGLG00100001769	LSM10	100	71.545	Heterocephalus_glaber_male
ENSGAGG00000024848	LSM10	85	67.619	ENSIPUG00000005808	oscp1a	91	67.619	Ictalurus_punctatus
ENSGAGG00000024848	LSM10	100	72.358	ENSSTOG00000000606	LSM10	100	72.358	Ictidomys_tridecemlineatus
ENSGAGG00000024848	LSM10	94	65.517	ENSKMAG00000012143	oscp1a	96	65.517	Kryptolebias_marmoratus
ENSGAGG00000024848	LSM10	97	63.025	ENSLBEG00000017764	oscp1a	98	63.025	Labrus_bergylta
ENSGAGG00000024848	LSM10	100	68.293	ENSLACG00000015904	LSM10	95	68.293	Latimeria_chalumnae
ENSGAGG00000024848	LSM10	95	68.376	ENSLOCG00000018277	oscp1a	96	68.376	Lepisosteus_oculatus
ENSGAGG00000024848	LSM10	100	73.171	ENSLAFG00000009600	LSM10	100	73.171	Loxodonta_africana
ENSGAGG00000024848	LSM10	100	72.358	ENSMFAG00000009115	LSM10	100	72.358	Macaca_fascicularis
ENSGAGG00000024848	LSM10	100	72.358	ENSMMUG00000017338	LSM10	100	72.358	Macaca_mulatta
ENSGAGG00000024848	LSM10	100	72.358	ENSMNEG00000020023	LSM10	100	72.358	Macaca_nemestrina
ENSGAGG00000024848	LSM10	100	72.358	ENSMLEG00000025150	LSM10	100	72.358	Mandrillus_leucophaeus
ENSGAGG00000024848	LSM10	96	64.407	ENSMAMG00000004427	oscp1a	97	64.407	Mastacembelus_armatus
ENSGAGG00000024848	LSM10	94	63.793	ENSMZEG00005026307	oscp1a	94	63.793	Maylandia_zebra
ENSGAGG00000024848	LSM10	100	82.114	ENSMGAG00000015707	LSM10	100	82.114	Meleagris_gallopavo
ENSGAGG00000024848	LSM10	98	73.554	ENSMAUG00000016624	Lsm10	99	73.554	Mesocricetus_auratus
ENSGAGG00000024848	LSM10	99	73.770	ENSMOCG00000021943	Lsm10	100	73.770	Microtus_ochrogaster
ENSGAGG00000024848	LSM10	98	62.810	ENSMMOG00000013597	oscp1a	90	62.810	Mola_mola
ENSGAGG00000024848	LSM10	100	77.236	ENSMODG00000023328	LSM10	100	77.236	Monodelphis_domestica
ENSGAGG00000024848	LSM10	52	65.625	ENSMALG00000012661	oscp1a	50	65.625	Monopterus_albus
ENSGAGG00000024848	LSM10	98	74.380	MGP_CAROLIEiJ_G0026467	Lsm10	100	78.495	Mus_caroli
ENSGAGG00000024848	LSM10	98	74.380	ENSMUSG00000050188	Lsm10	100	78.495	Mus_musculus
ENSGAGG00000024848	LSM10	98	74.380	MGP_PahariEiJ_G0028798	Lsm10	100	78.495	Mus_pahari
ENSGAGG00000024848	LSM10	98	74.380	MGP_SPRETEiJ_G0027446	Lsm10	100	78.495	Mus_spretus
ENSGAGG00000024848	LSM10	100	72.358	ENSMPUG00000018593	LSM10	100	72.358	Mustela_putorius_furo
ENSGAGG00000024848	LSM10	100	72.358	ENSMLUG00000023895	LSM10	100	72.358	Myotis_lucifugus
ENSGAGG00000024848	LSM10	100	73.171	ENSNGAG00000015011	Lsm10	100	73.171	Nannospalax_galili
ENSGAGG00000024848	LSM10	95	64.103	ENSNBRG00000014306	oscp1a	95	64.103	Neolamprologus_brichardi
ENSGAGG00000024848	LSM10	100	72.358	ENSNLEG00000033754	LSM10	100	72.358	Nomascus_leucogenys
ENSGAGG00000024848	LSM10	100	78.049	ENSMEUG00000006313	LSM10	100	78.049	Notamacropus_eugenii
ENSGAGG00000024848	LSM10	100	76.423	ENSOPRG00000001699	LSM10	100	76.423	Ochotona_princeps
ENSGAGG00000024848	LSM10	100	73.171	ENSODEG00000019161	LSM10	100	73.171	Octodon_degus
ENSGAGG00000024848	LSM10	96	64.407	ENSONIG00000020904	oscp1a	97	64.407	Oreochromis_niloticus
ENSGAGG00000024848	LSM10	100	73.171	ENSOANG00000002066	LSM10	100	73.171	Ornithorhynchus_anatinus
ENSGAGG00000024848	LSM10	100	74.797	ENSOCUG00000005333	LSM10	100	74.797	Oryctolagus_cuniculus
ENSGAGG00000024848	LSM10	93	66.957	ENSORLG00000009504	oscp1a	95	66.957	Oryzias_latipes
ENSGAGG00000024848	LSM10	93	66.957	ENSORLG00020016201	oscp1a	95	66.957	Oryzias_latipes_hni
ENSGAGG00000024848	LSM10	93	66.087	ENSORLG00015007794	oscp1a	95	66.087	Oryzias_latipes_hsok
ENSGAGG00000024848	LSM10	100	73.171	ENSOGAG00000002653	LSM10	100	73.171	Otolemur_garnettii
ENSGAGG00000024848	LSM10	97	75.630	ENSOARG00000009596	LSM10	98	75.630	Ovis_aries
ENSGAGG00000024848	LSM10	100	72.358	ENSPPAG00000023465	LSM10	100	72.358	Pan_paniscus
ENSGAGG00000024848	LSM10	100	73.171	ENSPPRG00000014619	LSM10	100	73.171	Panthera_pardus
ENSGAGG00000024848	LSM10	100	73.171	ENSPTIG00000004613	LSM10	100	73.171	Panthera_tigris_altaica
ENSGAGG00000024848	LSM10	100	72.358	ENSPTRG00000000539	LSM10	100	72.358	Pan_troglodytes
ENSGAGG00000024848	LSM10	100	72.358	ENSPANG00000023172	LSM10	100	72.358	Papio_anubis
ENSGAGG00000024848	LSM10	95	67.521	ENSPKIG00000003728	oscp1a	94	67.521	Paramormyrops_kingsleyae
ENSGAGG00000024848	LSM10	100	95.122	ENSPSIG00000000590	LSM10	100	95.122	Pelodiscus_sinensis
ENSGAGG00000024848	LSM10	63	67.532	ENSPMGG00000015718	oscp1a	100	67.532	Periophthalmus_magnuspinnatus
ENSGAGG00000024848	LSM10	84	80.583	ENSPCIG00000014865	LSM10	76	80.583	Phascolarctos_cinereus
ENSGAGG00000024848	LSM10	91	66.964	ENSPFOG00000020490	oscp1a	95	66.964	Poecilia_formosa
ENSGAGG00000024848	LSM10	94	64.655	ENSPLAG00000016537	oscp1a	89	64.655	Poecilia_latipinna
ENSGAGG00000024848	LSM10	88	67.593	ENSPMEG00000000174	oscp1a	94	67.593	Poecilia_mexicana
ENSGAGG00000024848	LSM10	94	63.793	ENSPREG00000009899	oscp1a	89	63.793	Poecilia_reticulata
ENSGAGG00000024848	LSM10	100	72.358	ENSPPYG00000001539	LSM10	100	72.358	Pongo_abelii
ENSGAGG00000024848	LSM10	96	74.576	ENSPCAG00000002520	LSM10	97	74.576	Procavia_capensis
ENSGAGG00000024848	LSM10	100	71.545	ENSPVAG00000008644	LSM10	100	71.545	Pteropus_vampyrus
ENSGAGG00000024848	LSM10	94	63.793	ENSPNYG00000003138	oscp1a	94	63.793	Pundamilia_nyererei
ENSGAGG00000024848	LSM10	95	63.248	ENSPNAG00000028829	oscp1a	97	63.248	Pygocentrus_nattereri
ENSGAGG00000024848	LSM10	98	73.554	ENSRNOG00000025716	Lsm10	99	73.554	Rattus_norvegicus
ENSGAGG00000024848	LSM10	100	72.358	ENSRBIG00000001561	LSM10	100	72.358	Rhinopithecus_bieti
ENSGAGG00000024848	LSM10	100	72.358	ENSRROG00000011414	LSM10	100	72.358	Rhinopithecus_roxellana
ENSGAGG00000024848	LSM10	100	73.171	ENSSBOG00000036413	-	100	73.171	Saimiri_boliviensis_boliviensis
ENSGAGG00000024848	LSM10	100	78.862	ENSSHAG00000018056	LSM10	100	78.862	Sarcophilus_harrisii
ENSGAGG00000024848	LSM10	96	66.102	ENSSFOG00015019954	lsm10	97	66.102	Scleropages_formosus
ENSGAGG00000024848	LSM10	92	64.602	ENSSMAG00000001297	oscp1a	97	64.602	Scophthalmus_maximus
ENSGAGG00000024848	LSM10	96	62.185	ENSSDUG00000007090	oscp1a	97	62.185	Seriola_dumerili
ENSGAGG00000024848	LSM10	93	64.035	ENSSLDG00000000800	oscp1a	94	64.035	Seriola_lalandi_dorsalis
ENSGAGG00000024848	LSM10	100	73.600	ENSSARG00000004211	LSM10	100	74.400	Sorex_araneus
ENSGAGG00000024848	LSM10	92	65.487	ENSSPAG00000009229	oscp1a	93	65.487	Stegastes_partitus
ENSGAGG00000024848	LSM10	100	72.358	ENSSSCG00000038916	LSM10	100	72.358	Sus_scrofa
ENSGAGG00000024848	LSM10	99	81.967	ENSTGUG00000001600	-	100	81.967	Taeniopygia_guttata
ENSGAGG00000024848	LSM10	99	81.148	ENSTGUG00000001602	-	100	81.148	Taeniopygia_guttata
ENSGAGG00000024848	LSM10	99	60.656	ENSTRUG00000010531	oscp1a	98	60.656	Takifugu_rubripes
ENSGAGG00000024848	LSM10	100	72.358	ENSTBEG00000016674	LSM10	100	72.358	Tupaia_belangeri
ENSGAGG00000024848	LSM10	100	72.358	ENSUAMG00000020265	LSM10	100	72.358	Ursus_americanus
ENSGAGG00000024848	LSM10	100	72.358	ENSUMAG00000001438	LSM10	57	72.358	Ursus_maritimus
ENSGAGG00000024848	LSM10	100	72.358	ENSVVUG00000023209	LSM10	100	72.358	Vulpes_vulpes
ENSGAGG00000024848	LSM10	100	69.919	ENSXETG00000027631	lsm10	100	69.919	Xenopus_tropicalis
ENSGAGG00000024848	LSM10	94	63.793	ENSXCOG00000018776	oscp1a	73	63.793	Xiphophorus_couchianus
ENSGAGG00000024848	LSM10	88	66.667	ENSXMAG00000019963	oscp1a	86	66.667	Xiphophorus_maculatus