EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000025012 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 13966 bases
Position: chrPPEB01002088.1:174982-188947
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000035189	FRG1	PF06229.12	3.7e-83	1	1
ENSGAGP00000035188	FRG1	PF06229.12	4.9e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000039845	-	1450	-	ENSGAGP00000035189	257 (aa)	-	-
ENSGAGT00000039844	-	1230	-	ENSGAGP00000035188	256 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000025012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000025012's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000025012	-	100	84.496	ENSG00000109536	FRG1	100	90.517	Homo_sapiens
ENSGAGG00000025012	-	100	76.172	ENSAPOG00000001060	frg1	100	76.172	Acanthochromis_polyacanthus
ENSGAGG00000025012	-	100	84.496	ENSAMEG00000013503	FRG1	100	84.884	Ailuropoda_melanoleuca
ENSGAGG00000025012	-	86	77.273	ENSACIG00000022283	frg1	99	77.273	Amphilophus_citrinellus
ENSGAGG00000025012	-	86	77.273	ENSAOCG00000024240	frg1	86	77.273	Amphiprion_ocellaris
ENSGAGG00000025012	-	100	75.391	ENSAPEG00000002486	frg1	100	75.391	Amphiprion_percula
ENSGAGG00000025012	-	100	73.438	ENSATEG00000010414	frg1	100	73.438	Anabas_testudineus
ENSGAGG00000025012	-	100	90.234	ENSAPLG00000007785	-	100	90.234	Anas_platyrhynchos
ENSGAGG00000025012	-	100	87.500	ENSACAG00000006877	-	100	87.500	Anolis_carolinensis
ENSGAGG00000025012	-	100	85.992	ENSANAG00000020876	FRG1	100	85.992	Aotus_nancymaae
ENSGAGG00000025012	-	100	68.340	ENSACLG00000027065	frg1	100	68.340	Astatotilapia_calliptera
ENSGAGG00000025012	-	100	71.206	ENSAMXG00000032700	frg1	100	75.097	Astyanax_mexicanus
ENSGAGG00000025012	-	100	84.496	ENSBTAG00000007089	FRG1	100	84.884	Bos_taurus
ENSGAGG00000025012	-	83	43.612	WBGene00014177	frg-1	82	43.612	Caenorhabditis_elegans
ENSGAGG00000025012	-	100	85.992	ENSCJAG00000011272	FRG1	100	85.992	Callithrix_jacchus
ENSGAGG00000025012	-	100	84.496	ENSCAFG00000007135	FRG1	100	84.884	Canis_familiaris
ENSGAGG00000025012	-	82	89.151	ENSCAFG00020000082	-	85	89.151	Canis_lupus_dingo
ENSGAGG00000025012	-	100	84.496	ENSCHIG00000011585	-	100	84.884	Capra_hircus
ENSGAGG00000025012	-	98	61.753	ENSTSYG00000031599	-	99	61.753	Carlito_syrichta
ENSGAGG00000025012	-	89	86.842	ENSCAPG00000016056	-	92	87.556	Cavia_aperea
ENSGAGG00000025012	-	100	85.992	ENSCPOG00000022277	-	100	85.992	Cavia_porcellus
ENSGAGG00000025012	-	100	85.992	ENSCCAG00000024627	FRG1	100	85.992	Cebus_capucinus
ENSGAGG00000025012	-	100	84.496	ENSCATG00000029230	FRG1	100	84.496	Cercocebus_atys
ENSGAGG00000025012	-	100	85.992	ENSCLAG00000000370	-	100	85.992	Chinchilla_lanigera
ENSGAGG00000025012	-	100	70.155	ENSCLAG00000004960	-	100	69.767	Chinchilla_lanigera
ENSGAGG00000025012	-	99	58.661	ENSCLAG00000009263	-	100	58.268	Chinchilla_lanigera
ENSGAGG00000025012	-	100	58.984	ENSCLAG00000006068	-	100	58.203	Chinchilla_lanigera
ENSGAGG00000025012	-	100	84.496	ENSCSAG00000002899	FRG1	100	84.496	Chlorocebus_sabaeus
ENSGAGG00000025012	-	84	82.407	ENSCSAG00000017729	-	100	82.407	Chlorocebus_sabaeus
ENSGAGG00000025012	-	99	98.438	ENSCPBG00000009211	-	99	98.438	Chrysemys_picta_bellii
ENSGAGG00000025012	-	99	50.746	ENSCING00000005161	-	99	49.813	Ciona_intestinalis
ENSGAGG00000025012	-	51	55.725	ENSCSAVG00000008018	-	100	48.634	Ciona_savignyi
ENSGAGG00000025012	-	100	84.496	ENSCANG00000020991	FRG1	100	84.496	Colobus_angolensis_palliatus
ENSGAGG00000025012	-	100	84.884	ENSCGRG00001014998	Frg1	100	84.884	Cricetulus_griseus_chok1gshd
ENSGAGG00000025012	-	100	84.884	ENSCGRG00000011860	-	100	84.884	Cricetulus_griseus_crigri
ENSGAGG00000025012	-	100	68.872	ENSCGRG00000003902	-	96	68.872	Cricetulus_griseus_crigri
ENSGAGG00000025012	-	96	68.571	ENSCSEG00000015950	frg1	100	68.571	Cynoglossus_semilaevis
ENSGAGG00000025012	-	100	71.484	ENSCVAG00000009985	frg1	100	73.047	Cyprinodon_variegatus
ENSGAGG00000025012	-	100	75.000	ENSDARG00000056504	frg1	100	76.562	Danio_rerio
ENSGAGG00000025012	-	100	84.884	ENSDNOG00000014886	FRG1	100	84.884	Dasypus_novemcinctus
ENSGAGG00000025012	-	100	73.256	ENSDORG00000016190	Frg1	100	75.581	Dipodomys_ordii
ENSGAGG00000025012	-	83	53.271	FBgn0036964	FRG1	81	53.271	Drosophila_melanogaster
ENSGAGG00000025012	-	100	82.171	ENSETEG00000012349	-	100	82.558	Echinops_telfairi
ENSGAGG00000025012	-	58	52.027	ENSEBUG00000012359	FRG1	89	54.054	Eptatretus_burgeri
ENSGAGG00000025012	-	100	85.603	ENSEASG00005017497	FRG1	100	85.603	Equus_asinus_asinus
ENSGAGG00000025012	-	100	85.603	ENSECAG00000003122	FRG1	100	85.603	Equus_caballus
ENSGAGG00000025012	-	61	89.172	ENSEEUG00000000145	-	100	89.172	Erinaceus_europaeus
ENSGAGG00000025012	-	100	71.094	ENSELUG00000021712	frg1	100	71.875	Esox_lucius
ENSGAGG00000025012	-	100	84.496	ENSFCAG00000025737	FRG1	100	84.884	Felis_catus
ENSGAGG00000025012	-	95	87.755	ENSFALG00000011231	-	96	87.755	Ficedula_albicollis
ENSGAGG00000025012	-	100	74.615	ENSFDAG00000012697	-	98	80.374	Fukomys_damarensis
ENSGAGG00000025012	-	100	86.381	ENSFDAG00000000962	-	100	86.381	Fukomys_damarensis
ENSGAGG00000025012	-	100	71.094	ENSFHEG00000010540	frg1	100	71.484	Fundulus_heteroclitus
ENSGAGG00000025012	-	100	68.750	ENSGMOG00000000867	frg1	100	68.750	Gadus_morhua
ENSGAGG00000025012	-	100	87.891	ENSGALG00000013590	-	100	87.891	Gallus_gallus
ENSGAGG00000025012	-	81	68.750	ENSGAFG00000013855	frg1	100	70.673	Gambusia_affinis
ENSGAGG00000025012	-	100	71.206	ENSGACG00000016888	frg1	100	71.984	Gasterosteus_aculeatus
ENSGAGG00000025012	-	69	76.404	ENSGGOG00000012888	-	90	76.404	Gorilla_gorilla
ENSGAGG00000025012	-	100	56.809	ENSGGOG00000040796	-	100	57.198	Gorilla_gorilla
ENSGAGG00000025012	-	100	72.266	ENSHBUG00000010667	frg1	100	73.828	Haplochromis_burtoni
ENSGAGG00000025012	-	100	86.381	ENSHGLG00000005601	FRG1	100	86.381	Heterocephalus_glaber_female
ENSGAGG00000025012	-	99	81.250	ENSHGLG00000020943	-	99	81.250	Heterocephalus_glaber_female
ENSGAGG00000025012	-	100	72.763	ENSHGLG00000001211	-	100	72.374	Heterocephalus_glaber_female
ENSGAGG00000025012	-	99	82.812	ENSHGLG00000020402	-	94	82.812	Heterocephalus_glaber_female
ENSGAGG00000025012	-	100	86.770	ENSHGLG00100016261	-	100	86.770	Heterocephalus_glaber_male
ENSGAGG00000025012	-	100	73.152	ENSHGLG00100010674	-	100	72.763	Heterocephalus_glaber_male
ENSGAGG00000025012	-	100	67.704	ENSHGLG00100015285	-	100	67.704	Heterocephalus_glaber_male
ENSGAGG00000025012	-	99	81.250	ENSHGLG00100021211	-	99	81.250	Heterocephalus_glaber_male
ENSGAGG00000025012	-	86	73.756	ENSHCOG00000000224	frg1	94	73.756	Hippocampus_comes
ENSGAGG00000025012	-	100	74.708	ENSIPUG00000022716	frg1	100	74.708	Ictalurus_punctatus
ENSGAGG00000025012	-	100	84.109	ENSSTOG00000002857	-	100	84.109	Ictidomys_tridecemlineatus
ENSGAGG00000025012	-	100	83.721	ENSJJAG00000020625	Frg1	100	84.109	Jaculus_jaculus
ENSGAGG00000025012	-	100	72.266	ENSKMAG00000005841	frg1	100	72.266	Kryptolebias_marmoratus
ENSGAGG00000025012	-	100	69.531	ENSLBEG00000001466	frg1	100	69.531	Labrus_bergylta
ENSGAGG00000025012	-	100	70.881	ENSLACG00000010243	frg1	100	72.414	Latimeria_chalumnae
ENSGAGG00000025012	-	100	79.297	ENSLOCG00000013868	frg1	100	79.297	Lepisosteus_oculatus
ENSGAGG00000025012	-	100	83.721	ENSLAFG00000011191	FRG1	100	84.496	Loxodonta_africana
ENSGAGG00000025012	-	100	84.496	ENSMFAG00000031178	FRG1	100	84.496	Macaca_fascicularis
ENSGAGG00000025012	-	82	78.505	ENSMFAG00000042873	-	89	78.505	Macaca_fascicularis
ENSGAGG00000025012	-	100	84.496	ENSMMUG00000001824	FRG1	100	84.496	Macaca_mulatta
ENSGAGG00000025012	-	78	78.325	ENSMMUG00000047496	-	87	78.325	Macaca_mulatta
ENSGAGG00000025012	-	96	78.138	ENSMNEG00000018620	FRG1	100	78.138	Macaca_nemestrina
ENSGAGG00000025012	-	100	84.496	ENSMLEG00000028881	FRG1	100	84.496	Mandrillus_leucophaeus
ENSGAGG00000025012	-	100	74.219	ENSMAMG00000012406	frg1	100	74.219	Mastacembelus_armatus
ENSGAGG00000025012	-	100	71.875	ENSMZEG00005007549	frg1	100	73.438	Maylandia_zebra
ENSGAGG00000025012	-	100	87.891	ENSMGAG00000011481	-	100	87.891	Meleagris_gallopavo
ENSGAGG00000025012	-	100	84.884	ENSMAUG00000000847	Frg1	100	84.884	Mesocricetus_auratus
ENSGAGG00000025012	-	100	85.271	ENSMICG00000046816	FRG1	100	85.271	Microcebus_murinus
ENSGAGG00000025012	-	100	78.599	ENSMOCG00000023000	Frg1	100	78.599	Microtus_ochrogaster
ENSGAGG00000025012	-	87	73.874	ENSMMOG00000004008	frg1	94	73.874	Mola_mola
ENSGAGG00000025012	-	100	84.109	ENSMODG00000019031	-	87	83.721	Monodelphis_domestica
ENSGAGG00000025012	-	100	71.094	ENSMALG00000018497	frg1	100	72.656	Monopterus_albus
ENSGAGG00000025012	-	100	84.496	MGP_CAROLIEiJ_G0031006	Frg1	100	84.496	Mus_caroli
ENSGAGG00000025012	-	100	84.496	ENSMUSG00000031590	Frg1	100	84.496	Mus_musculus
ENSGAGG00000025012	-	100	84.109	MGP_PahariEiJ_G0021475	Frg1	100	84.109	Mus_pahari
ENSGAGG00000025012	-	100	84.109	MGP_SPRETEiJ_G0032120	Frg1	100	84.109	Mus_spretus
ENSGAGG00000025012	-	100	84.496	ENSMPUG00000017962	FRG1	100	84.884	Mustela_putorius_furo
ENSGAGG00000025012	-	100	85.992	ENSMLUG00000023179	FRG1	100	85.992	Myotis_lucifugus
ENSGAGG00000025012	-	100	84.496	ENSNGAG00000016411	Frg1	100	84.496	Nannospalax_galili
ENSGAGG00000025012	-	81	70.192	ENSNBRG00000006806	frg1	95	70.192	Neolamprologus_brichardi
ENSGAGG00000025012	-	100	59.922	ENSNLEG00000032846	-	100	80.357	Nomascus_leucogenys
ENSGAGG00000025012	-	100	73.180	ENSNLEG00000035849	-	100	73.180	Nomascus_leucogenys
ENSGAGG00000025012	-	78	78.109	ENSNLEG00000036059	-	86	78.109	Nomascus_leucogenys
ENSGAGG00000025012	-	78	77.612	ENSNLEG00000028874	-	91	77.612	Nomascus_leucogenys
ENSGAGG00000025012	-	100	72.201	ENSNLEG00000032333	-	100	71.815	Nomascus_leucogenys
ENSGAGG00000025012	-	100	85.214	ENSNLEG00000000930	FRG1	100	85.214	Nomascus_leucogenys
ENSGAGG00000025012	-	59	86.842	ENSMEUG00000007509	-	59	86.842	Notamacropus_eugenii
ENSGAGG00000025012	-	100	70.817	ENSOPRG00000004722	-	100	70.817	Ochotona_princeps
ENSGAGG00000025012	-	100	64.981	ENSODEG00000006953	-	96	71.233	Octodon_degus
ENSGAGG00000025012	-	100	85.992	ENSODEG00000006458	-	100	85.992	Octodon_degus
ENSGAGG00000025012	-	100	72.374	ENSONIG00000010162	frg1	100	73.930	Oreochromis_niloticus
ENSGAGG00000025012	-	70	85.556	ENSOANG00000005659	-	80	85.556	Ornithorhynchus_anatinus
ENSGAGG00000025012	-	100	84.496	ENSOCUG00000009038	-	100	84.496	Oryctolagus_cuniculus
ENSGAGG00000025012	-	96	71.020	ENSORLG00000008106	frg1	89	71.020	Oryzias_latipes
ENSGAGG00000025012	-	100	71.484	ENSORLG00020014355	frg1	100	71.484	Oryzias_latipes_hni
ENSGAGG00000025012	-	100	71.484	ENSORLG00015014159	frg1	100	71.484	Oryzias_latipes_hsok
ENSGAGG00000025012	-	85	71.889	ENSOMEG00000002468	frg1	89	72.350	Oryzias_melastigma
ENSGAGG00000025012	-	100	85.271	ENSOGAG00000005749	-	100	83.721	Otolemur_garnettii
ENSGAGG00000025012	-	100	81.992	ENSOARG00000008592	FRG1	100	82.375	Ovis_aries
ENSGAGG00000025012	-	84	82.870	ENSPPAG00000043170	-	100	84.722	Pan_paniscus
ENSGAGG00000025012	-	96	62.016	ENSPPAG00000043174	-	100	61.628	Pan_paniscus
ENSGAGG00000025012	-	100	84.047	ENSPPRG00000019777	-	100	84.047	Panthera_pardus
ENSGAGG00000025012	-	100	84.109	ENSPPRG00000025003	-	100	84.496	Panthera_pardus
ENSGAGG00000025012	-	100	84.496	ENSPTIG00000006588	-	100	84.884	Panthera_tigris_altaica
ENSGAGG00000025012	-	100	84.436	ENSPTIG00000006566	-	100	84.436	Panthera_tigris_altaica
ENSGAGG00000025012	-	96	68.145	ENSPTRG00000044710	-	100	68.145	Pan_troglodytes
ENSGAGG00000025012	-	100	84.496	ENSPTRG00000050205	-	100	84.884	Pan_troglodytes
ENSGAGG00000025012	-	89	73.160	ENSPTRG00000043123	-	94	72.532	Pan_troglodytes
ENSGAGG00000025012	-	95	67.623	ENSPTRG00000052363	-	94	83.168	Pan_troglodytes
ENSGAGG00000025012	-	100	84.496	ENSPTRG00000016671	-	100	84.884	Pan_troglodytes
ENSGAGG00000025012	-	96	67.339	ENSPTRG00000050204	-	100	67.339	Pan_troglodytes
ENSGAGG00000025012	-	70	76.111	ENSPANG00000031530	-	84	76.111	Papio_anubis
ENSGAGG00000025012	-	100	69.141	ENSPKIG00000024189	frg1	100	69.141	Paramormyrops_kingsleyae
ENSGAGG00000025012	-	84	95.814	ENSPSIG00000017971	-	82	95.814	Pelodiscus_sinensis
ENSGAGG00000025012	-	98	68.379	ENSPMGG00000019273	frg1	100	68.400	Periophthalmus_magnuspinnatus
ENSGAGG00000025012	-	100	84.884	ENSPEMG00000000650	Frg1	100	84.884	Peromyscus_maniculatus_bairdii
ENSGAGG00000025012	-	100	83.721	ENSPCIG00000007530	-	69	83.721	Phascolarctos_cinereus
ENSGAGG00000025012	-	100	69.922	ENSPFOG00000006721	frg1	100	71.875	Poecilia_formosa
ENSGAGG00000025012	-	100	70.312	ENSPMEG00000013816	frg1	100	71.875	Poecilia_mexicana
ENSGAGG00000025012	-	100	69.922	ENSPREG00000000097	frg1	100	71.484	Poecilia_reticulata
ENSGAGG00000025012	-	62	82.911	ENSPPYG00000011275	-	87	82.911	Pongo_abelii
ENSGAGG00000025012	-	56	88.966	ENSPPYG00000029810	-	100	88.966	Pongo_abelii
ENSGAGG00000025012	-	95	81.707	ENSPCAG00000014953	-	100	80.894	Procavia_capensis
ENSGAGG00000025012	-	100	56.977	ENSPCOG00000022726	FRG1	100	57.364	Propithecus_coquereli
ENSGAGG00000025012	-	100	70.930	ENSPVAG00000010551	FRG1	100	70.155	Pteropus_vampyrus
ENSGAGG00000025012	-	67	76.163	ENSPNYG00000015209	frg1	74	76.163	Pundamilia_nyererei
ENSGAGG00000025012	-	100	71.094	ENSPNAG00000013259	frg1	100	71.094	Pygocentrus_nattereri
ENSGAGG00000025012	-	100	84.109	ENSRNOG00000009846	Frg1	100	84.109	Rattus_norvegicus
ENSGAGG00000025012	-	87	83.111	ENSRBIG00000042219	-	94	83.111	Rhinopithecus_bieti
ENSGAGG00000025012	-	82	81.043	ENSRROG00000032084	-	94	77.885	Rhinopithecus_roxellana
ENSGAGG00000025012	-	100	81.395	ENSRROG00000015523	FRG1	100	81.395	Rhinopithecus_roxellana
ENSGAGG00000025012	-	100	85.214	ENSSBOG00000034175	FRG1	100	85.214	Saimiri_boliviensis_boliviensis
ENSGAGG00000025012	-	100	83.721	ENSSHAG00000005886	-	100	84.109	Sarcophilus_harrisii
ENSGAGG00000025012	-	97	71.774	ENSSFOG00015021361	frg1	99	71.774	Scleropages_formosus
ENSGAGG00000025012	-	100	69.531	ENSSMAG00000001213	frg1	100	69.531	Scophthalmus_maximus
ENSGAGG00000025012	-	100	71.094	ENSSDUG00000018886	frg1	100	73.047	Seriola_dumerili
ENSGAGG00000025012	-	100	70.703	ENSSLDG00000024191	frg1	100	72.266	Seriola_lalandi_dorsalis
ENSGAGG00000025012	-	66	88.235	ENSSARG00000002471	-	94	86.932	Sorex_araneus
ENSGAGG00000025012	-	100	82.422	ENSSPUG00000017326	-	99	86.916	Sphenodon_punctatus
ENSGAGG00000025012	-	100	70.703	ENSSPAG00000013294	frg1	100	69.141	Stegastes_partitus
ENSGAGG00000025012	-	100	84.109	ENSSSCG00000006996	FRG1	100	84.496	Sus_scrofa
ENSGAGG00000025012	-	100	88.281	ENSTGUG00000007028	-	100	88.281	Taeniopygia_guttata
ENSGAGG00000025012	-	100	72.656	ENSTRUG00000016208	frg1	100	72.656	Takifugu_rubripes
ENSGAGG00000025012	-	100	73.152	ENSTNIG00000007128	frg1	100	71.595	Tetraodon_nigroviridis
ENSGAGG00000025012	-	82	62.085	ENSTBEG00000012789	-	99	62.085	Tupaia_belangeri
ENSGAGG00000025012	-	77	56.061	ENSTBEG00000017605	-	99	56.061	Tupaia_belangeri
ENSGAGG00000025012	-	100	83.721	ENSTBEG00000014491	-	100	83.721	Tupaia_belangeri
ENSGAGG00000025012	-	100	84.109	ENSTTRG00000003429	FRG1	100	84.496	Tursiops_truncatus
ENSGAGG00000025012	-	96	80.162	ENSUAMG00000012123	-	100	79.268	Ursus_americanus
ENSGAGG00000025012	-	100	84.496	ENSUMAG00000021119	FRG1	100	84.884	Ursus_maritimus
ENSGAGG00000025012	-	100	82.171	ENSVPAG00000000616	FRG1	100	81.783	Vicugna_pacos
ENSGAGG00000025012	-	88	87.111	ENSVPAG00000011977	-	95	87.111	Vicugna_pacos
ENSGAGG00000025012	-	82	89.151	ENSVVUG00000007181	-	77	89.151	Vulpes_vulpes
ENSGAGG00000025012	-	100	82.422	ENSXETG00000012470	frg1	100	82.422	Xenopus_tropicalis
ENSGAGG00000025012	-	100	66.797	ENSXCOG00000005312	frg1	100	66.797	Xiphophorus_couchianus
ENSGAGG00000025012	-	100	69.922	ENSXMAG00000007751	frg1	100	71.484	Xiphophorus_maculatus