EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000025029 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 18063 bases
Position: chrPPEB01002090.1:56348-74410
Accession: 17349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000035208	PRP4	PF08799.11	5.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000039868	PRPF4-201	1688	-	ENSGAGP00000035208	540 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000025029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000025029's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000025029	PRPF4	54	31.250	ENSGAGG00000014637	POC1A	72	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000025029	PRPF4	96	90.909	ENSG00000136875	PRPF4	99	91.068	Homo_sapiens
ENSGAGG00000025029	PRPF4	94	76.923	ENSAPOG00000014132	prpf4	99	76.653	Acanthochromis_polyacanthus
ENSGAGG00000025029	PRPF4	95	91.262	ENSAMEG00000013048	PRPF4	96	91.262	Ailuropoda_melanoleuca
ENSGAGG00000025029	PRPF4	94	76.529	ENSACIG00000005579	prpf4	100	76.275	Amphilophus_citrinellus
ENSGAGG00000025029	PRPF4	94	75.787	ENSAOCG00000005457	prpf4	99	75.787	Amphiprion_ocellaris
ENSGAGG00000025029	PRPF4	94	75.591	ENSAPEG00000000776	prpf4	99	75.591	Amphiprion_percula
ENSGAGG00000025029	PRPF4	94	75.740	ENSATEG00000023013	prpf4	100	75.490	Anabas_testudineus
ENSGAGG00000025029	PRPF4	97	91.048	ENSAPLG00000006534	PRPF4	98	91.048	Anas_platyrhynchos
ENSGAGG00000025029	PRPF4	94	91.211	ENSACAG00000015110	PRPF4	98	91.211	Anolis_carolinensis
ENSGAGG00000025029	PRPF4	97	89.734	ENSANAG00000022464	PRPF4	97	89.734	Aotus_nancymaae
ENSGAGG00000025029	PRPF4	94	75.740	ENSACLG00000019031	prpf4	99	75.740	Astatotilapia_calliptera
ENSGAGG00000025029	PRPF4	94	61.759	ENSAMXG00000006756	prpf4	100	72.584	Astyanax_mexicanus
ENSGAGG00000025029	PRPF4	96	91.085	ENSBTAG00000004571	PRPF4	99	91.085	Bos_taurus
ENSGAGG00000025029	PRPF4	87	44.304	WBGene00007972	prp-4	96	44.211	Caenorhabditis_elegans
ENSGAGG00000025029	PRPF4	96	91.103	ENSCJAG00000017856	PRPF4	99	91.103	Callithrix_jacchus
ENSGAGG00000025029	PRPF4	97	89.714	ENSCAFG00000003224	PRPF4	98	89.714	Canis_familiaris
ENSGAGG00000025029	PRPF4	95	91.602	ENSCAFG00020022637	PRPF4	99	91.602	Canis_lupus_dingo
ENSGAGG00000025029	PRPF4	95	91.262	ENSCHIG00000024648	-	99	91.262	Capra_hircus
ENSGAGG00000025029	PRPF4	99	88.454	ENSTSYG00000010366	PRPF4	99	91.068	Carlito_syrichta
ENSGAGG00000025029	PRPF4	85	83.055	ENSCAPG00000008935	PRPF4	97	83.055	Cavia_aperea
ENSGAGG00000025029	PRPF4	95	90.485	ENSCPOG00000010747	-	99	90.485	Cavia_porcellus
ENSGAGG00000025029	PRPF4	95	84.854	ENSCPOG00000014729	-	99	84.854	Cavia_porcellus
ENSGAGG00000025029	PRPF4	97	90.286	ENSCCAG00000028990	PRPF4	99	91.456	Cebus_capucinus
ENSGAGG00000025029	PRPF4	94	92.079	ENSCATG00000021552	PRPF4	99	91.262	Cercocebus_atys
ENSGAGG00000025029	PRPF4	95	90.680	ENSCLAG00000013448	PRPF4	99	90.680	Chinchilla_lanigera
ENSGAGG00000025029	PRPF4	84	90.929	ENSCHOG00000007233	PRPF4	100	90.929	Choloepus_hoffmanni
ENSGAGG00000025029	PRPF4	100	98.519	ENSCPBG00000019136	PRPF4	78	98.519	Chrysemys_picta_bellii
ENSGAGG00000025029	PRPF4	91	60.161	ENSCING00000001299	-	95	59.312	Ciona_intestinalis
ENSGAGG00000025029	PRPF4	91	59.514	ENSCSAVG00000009178	-	99	60.173	Ciona_savignyi
ENSGAGG00000025029	PRPF4	95	91.262	ENSCANG00000003246	PRPF4	99	91.262	Colobus_angolensis_palliatus
ENSGAGG00000025029	PRPF4	95	91.262	ENSCGRG00001016992	Prpf4	99	91.262	Cricetulus_griseus_chok1gshd
ENSGAGG00000025029	PRPF4	95	91.262	ENSCGRG00000017560	Prpf4	99	91.262	Cricetulus_griseus_crigri
ENSGAGG00000025029	PRPF4	94	75.394	ENSCSEG00000020451	prpf4	100	75.394	Cynoglossus_semilaevis
ENSGAGG00000025029	PRPF4	94	78.698	ENSDARG00000067639	prpf4	100	78.698	Danio_rerio
ENSGAGG00000025029	PRPF4	100	87.407	ENSDNOG00000013203	PRPF4	100	87.407	Dasypus_novemcinctus
ENSGAGG00000025029	PRPF4	95	91.262	ENSDORG00000026275	Prpf4	99	91.262	Dipodomys_ordii
ENSGAGG00000025029	PRPF4	84	56.893	FBgn0036733	U4-U6-60K	99	50.635	Drosophila_melanogaster
ENSGAGG00000025029	PRPF4	95	90.116	ENSETEG00000020389	PRPF4	99	90.116	Echinops_telfairi
ENSGAGG00000025029	PRPF4	94	72.072	ENSEBUG00000015229	prpf4	88	72.523	Eptatretus_burgeri
ENSGAGG00000025029	PRPF4	95	91.262	ENSEASG00005022678	PRPF4	99	91.262	Equus_asinus_asinus
ENSGAGG00000025029	PRPF4	95	91.262	ENSECAG00000007072	PRPF4	99	91.262	Equus_caballus
ENSGAGG00000025029	PRPF4	96	70.861	ENSEEUG00000007480	PRPF4	99	70.861	Erinaceus_europaeus
ENSGAGG00000025029	PRPF4	94	79.290	ENSELUG00000007510	prpf4	100	79.290	Esox_lucius
ENSGAGG00000025029	PRPF4	96	91.103	ENSFCAG00000005514	PRPF4	99	91.103	Felis_catus
ENSGAGG00000025029	PRPF4	94	90.807	ENSFALG00000005423	PRPF4	90	87.185	Ficedula_albicollis
ENSGAGG00000025029	PRPF4	95	90.485	ENSFDAG00000005839	PRPF4	99	90.485	Fukomys_damarensis
ENSGAGG00000025029	PRPF4	94	75.937	ENSFHEG00000001300	prpf4	99	75.937	Fundulus_heteroclitus
ENSGAGG00000025029	PRPF4	100	89.259	ENSGALG00000008857	PRPF4	100	89.815	Gallus_gallus
ENSGAGG00000025029	PRPF4	61	71.687	ENSGAFG00000012164	prpf4	68	71.687	Gambusia_affinis
ENSGAGG00000025029	PRPF4	94	68.945	ENSGACG00000015476	prpf4	99	68.750	Gasterosteus_aculeatus
ENSGAGG00000025029	PRPF4	97	89.905	ENSGGOG00000006943	PRPF4	99	91.068	Gorilla_gorilla
ENSGAGG00000025029	PRPF4	94	75.542	ENSHBUG00000000562	prpf4	99	75.542	Haplochromis_burtoni
ENSGAGG00000025029	PRPF4	95	90.485	ENSHGLG00000015191	PRPF4	99	90.485	Heterocephalus_glaber_female
ENSGAGG00000025029	PRPF4	95	72.621	ENSHGLG00000003838	-	99	72.621	Heterocephalus_glaber_female
ENSGAGG00000025029	PRPF4	95	74.855	ENSHGLG00000016628	-	99	75.629	Heterocephalus_glaber_female
ENSGAGG00000025029	PRPF4	95	72.621	ENSHGLG00100005571	-	99	72.621	Heterocephalus_glaber_male
ENSGAGG00000025029	PRPF4	94	77.515	ENSIPUG00000017956	PRPF4	100	77.515	Ictalurus_punctatus
ENSGAGG00000025029	PRPF4	95	90.680	ENSSTOG00000027833	PRPF4	99	90.680	Ictidomys_tridecemlineatus
ENSGAGG00000025029	PRPF4	95	91.068	ENSJJAG00000008838	Prpf4	99	91.068	Jaculus_jaculus
ENSGAGG00000025029	PRPF4	94	75.937	ENSKMAG00000013236	prpf4	99	75.937	Kryptolebias_marmoratus
ENSGAGG00000025029	PRPF4	94	75.446	ENSLBEG00000020611	prpf4	100	75.197	Labrus_bergylta
ENSGAGG00000025029	PRPF4	94	79.883	ENSLACG00000016317	PRPF4	98	79.883	Latimeria_chalumnae
ENSGAGG00000025029	PRPF4	94	80.868	ENSLOCG00000000581	prpf4	100	80.868	Lepisosteus_oculatus
ENSGAGG00000025029	PRPF4	96	90.698	ENSLAFG00000018225	PRPF4	99	90.698	Loxodonta_africana
ENSGAGG00000025029	PRPF4	94	91.881	ENSMFAG00000039397	PRPF4	99	91.068	Macaca_fascicularis
ENSGAGG00000025029	PRPF4	94	92.079	ENSMMUG00000005844	PRPF4	99	91.262	Macaca_mulatta
ENSGAGG00000025029	PRPF4	94	82.178	ENSMNEG00000033737	PRPF4	99	81.553	Macaca_nemestrina
ENSGAGG00000025029	PRPF4	94	92.079	ENSMLEG00000040284	PRPF4	99	91.262	Mandrillus_leucophaeus
ENSGAGG00000025029	PRPF4	94	75.294	ENSMAMG00000020141	prpf4	100	75.294	Mastacembelus_armatus
ENSGAGG00000025029	PRPF4	94	75.740	ENSMZEG00005023205	prpf4	99	75.740	Maylandia_zebra
ENSGAGG00000025029	PRPF4	94	91.961	ENSMGAG00000001796	PRPF4	95	91.961	Meleagris_gallopavo
ENSGAGG00000025029	PRPF4	94	91.373	ENSMAUG00000018022	Prpf4	99	90.874	Mesocricetus_auratus
ENSGAGG00000025029	PRPF4	97	89.143	ENSMICG00000015022	PRPF4	99	90.135	Microcebus_murinus
ENSGAGG00000025029	PRPF4	95	90.874	ENSMOCG00000018273	Prpf4	99	90.874	Microtus_ochrogaster
ENSGAGG00000025029	PRPF4	94	75.197	ENSMMOG00000021177	prpf4	100	75.197	Mola_mola
ENSGAGG00000025029	PRPF4	100	87.616	ENSMODG00000025096	-	97	87.616	Monodelphis_domestica
ENSGAGG00000025029	PRPF4	100	86.876	ENSMODG00000004444	-	100	86.876	Monodelphis_domestica
ENSGAGG00000025029	PRPF4	94	75.740	ENSMALG00000013624	prpf4	100	75.490	Monopterus_albus
ENSGAGG00000025029	PRPF4	95	91.068	MGP_CAROLIEiJ_G0026078	Prpf4	99	91.068	Mus_caroli
ENSGAGG00000025029	PRPF4	95	91.068	ENSMUSG00000066148	Prpf4	99	91.068	Mus_musculus
ENSGAGG00000025029	PRPF4	95	90.874	MGP_PahariEiJ_G0028413	Prpf4	99	90.874	Mus_pahari
ENSGAGG00000025029	PRPF4	95	91.068	MGP_SPRETEiJ_G0027042	Prpf4	99	91.068	Mus_spretus
ENSGAGG00000025029	PRPF4	95	91.262	ENSMPUG00000007883	PRPF4	99	91.262	Mustela_putorius_furo
ENSGAGG00000025029	PRPF4	95	89.320	ENSMLUG00000008626	-	96	89.320	Myotis_lucifugus
ENSGAGG00000025029	PRPF4	97	89.905	ENSMLUG00000015309	-	98	89.905	Myotis_lucifugus
ENSGAGG00000025029	PRPF4	95	85.631	ENSNGAG00000000468	Prpf4	99	85.631	Nannospalax_galili
ENSGAGG00000025029	PRPF4	94	75.937	ENSNBRG00000007972	prpf4	99	75.937	Neolamprologus_brichardi
ENSGAGG00000025029	PRPF4	97	90.095	ENSNLEG00000016647	PRPF4	99	91.262	Nomascus_leucogenys
ENSGAGG00000025029	PRPF4	95	91.389	ENSMEUG00000013256	PRPF4	99	91.389	Notamacropus_eugenii
ENSGAGG00000025029	PRPF4	96	90.716	ENSOPRG00000005302	PRPF4	99	90.716	Ochotona_princeps
ENSGAGG00000025029	PRPF4	95	90.874	ENSODEG00000018147	PRPF4	99	90.874	Octodon_degus
ENSGAGG00000025029	PRPF4	94	75.740	ENSONIG00000012671	prpf4	99	75.740	Oreochromis_niloticus
ENSGAGG00000025029	PRPF4	95	91.456	ENSOCUG00000005046	PRPF4	99	91.456	Oryctolagus_cuniculus
ENSGAGG00000025029	PRPF4	94	74.016	ENSORLG00000019641	prpf4	100	74.016	Oryzias_latipes
ENSGAGG00000025029	PRPF4	94	74.016	ENSORLG00020019438	prpf4	100	74.016	Oryzias_latipes_hni
ENSGAGG00000025029	PRPF4	94	74.428	ENSOMEG00000020941	prpf4	100	74.428	Oryzias_melastigma
ENSGAGG00000025029	PRPF4	97	85.468	ENSOGAG00000007802	PRPF4	98	85.468	Otolemur_garnettii
ENSGAGG00000025029	PRPF4	97	90.286	ENSOARG00000006319	PRPF4	97	90.286	Ovis_aries
ENSGAGG00000025029	PRPF4	97	89.905	ENSPPAG00000041797	PRPF4	99	91.068	Pan_paniscus
ENSGAGG00000025029	PRPF4	95	91.262	ENSPPRG00000014360	PRPF4	99	91.262	Panthera_pardus
ENSGAGG00000025029	PRPF4	95	91.262	ENSPTIG00000009574	PRPF4	99	91.262	Panthera_tigris_altaica
ENSGAGG00000025029	PRPF4	96	90.909	ENSPTRG00000021274	PRPF4	99	90.909	Pan_troglodytes
ENSGAGG00000025029	PRPF4	94	91.881	ENSPANG00000025776	PRPF4	97	89.905	Papio_anubis
ENSGAGG00000025029	PRPF4	94	81.262	ENSPKIG00000017259	prpf4	100	81.262	Paramormyrops_kingsleyae
ENSGAGG00000025029	PRPF4	95	96.296	ENSPSIG00000010713	PRPF4	90	96.296	Pelodiscus_sinensis
ENSGAGG00000025029	PRPF4	95	57.377	ENSPMGG00000000997	prpf4	99	57.195	Periophthalmus_magnuspinnatus
ENSGAGG00000025029	PRPF4	95	91.262	ENSPEMG00000024115	Prpf4	99	91.262	Peromyscus_maniculatus_bairdii
ENSGAGG00000025029	PRPF4	95	91.194	ENSPCIG00000003821	PRPF4	99	91.194	Phascolarctos_cinereus
ENSGAGG00000025029	PRPF4	94	69.667	ENSPFOG00000013524	prpf4	99	71.779	Poecilia_formosa
ENSGAGG00000025029	PRPF4	80	71.125	ENSPLAG00000011620	prpf4	99	68.098	Poecilia_latipinna
ENSGAGG00000025029	PRPF4	91	72.619	ENSPMEG00000006813	prpf4	99	72.619	Poecilia_mexicana
ENSGAGG00000025029	PRPF4	95	90.856	ENSPCAG00000002561	PRPF4	100	90.856	Procavia_capensis
ENSGAGG00000025029	PRPF4	97	89.524	ENSPCOG00000011975	PRPF4	99	90.680	Propithecus_coquereli
ENSGAGG00000025029	PRPF4	96	87.621	ENSPVAG00000004708	PRPF4	99	87.621	Pteropus_vampyrus
ENSGAGG00000025029	PRPF4	94	75.740	ENSPNYG00000008013	prpf4	99	75.740	Pundamilia_nyererei
ENSGAGG00000025029	PRPF4	94	78.895	ENSPNAG00000000697	prpf4	100	78.895	Pygocentrus_nattereri
ENSGAGG00000025029	PRPF4	95	90.874	ENSRNOG00000014777	Prpf4	99	90.874	Rattus_norvegicus
ENSGAGG00000025029	PRPF4	97	90.095	ENSRBIG00000040221	PRPF4	99	91.262	Rhinopithecus_bieti
ENSGAGG00000025029	PRPF4	97	90.095	ENSRROG00000040240	PRPF4	99	91.262	Rhinopithecus_roxellana
ENSGAGG00000025029	PRPF4	100	87.800	ENSSHAG00000017658	PRPF4	100	87.800	Sarcophilus_harrisii
ENSGAGG00000025029	PRPF4	94	82.249	ENSSFOG00015008963	prpf4	100	82.249	Scleropages_formosus
ENSGAGG00000025029	PRPF4	94	75.345	ENSSMAG00000008889	prpf4	100	75.098	Scophthalmus_maximus
ENSGAGG00000025029	PRPF4	94	72.441	ENSSDUG00000022083	prpf4	99	72.638	Seriola_dumerili
ENSGAGG00000025029	PRPF4	94	72.673	ENSSLDG00000008115	prpf4	98	72.871	Seriola_lalandi_dorsalis
ENSGAGG00000025029	PRPF4	95	93.010	ENSSPUG00000015582	PRPF4	99	93.010	Sphenodon_punctatus
ENSGAGG00000025029	PRPF4	94	70.588	ENSSPAG00000011286	prpf4	99	70.588	Stegastes_partitus
ENSGAGG00000025029	PRPF4	95	91.262	ENSSSCG00000024648	PRPF4	99	91.262	Sus_scrofa
ENSGAGG00000025029	PRPF4	97	88.506	ENSTGUG00000002623	PRPF4	100	92.638	Taeniopygia_guttata
ENSGAGG00000025029	PRPF4	94	75.246	ENSTRUG00000008853	prpf4	100	75.246	Takifugu_rubripes
ENSGAGG00000025029	PRPF4	94	75.591	ENSTNIG00000013250	prpf4	100	75.591	Tetraodon_nigroviridis
ENSGAGG00000025029	PRPF4	96	82.592	ENSTBEG00000000821	PRPF4	99	82.592	Tupaia_belangeri
ENSGAGG00000025029	PRPF4	79	96.512	ENSTTRG00000003246	PRPF4	85	96.512	Tursiops_truncatus
ENSGAGG00000025029	PRPF4	61	86.280	ENSUAMG00000018288	PRPF4	88	89.251	Ursus_americanus
ENSGAGG00000025029	PRPF4	95	90.680	ENSUMAG00000019375	PRPF4	99	90.680	Ursus_maritimus
ENSGAGG00000025029	PRPF4	96	90.909	ENSVPAG00000005281	PRPF4	99	90.909	Vicugna_pacos
ENSGAGG00000025029	PRPF4	95	90.504	ENSVVUG00000002476	PRPF4	99	91.485	Vulpes_vulpes
ENSGAGG00000025029	PRPF4	67	58.564	ENSXCOG00000006101	prpf4	93	60.345	Xiphophorus_couchianus
ENSGAGG00000025029	PRPF4	86	64.224	ENSXMAG00000002750	prpf4	99	65.422	Xiphophorus_maculatus