EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000025113 (Gene tree)
Gene ID: -
Gene Symbol: LARP1
Alias: KIAA0731|LARP|MGC19556
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 75177 bases
Position: chrPPEB01002836.1:127315-202491
Accession: 29531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000035360	La	PF05383.17	7e-21	1	1
ENSGAGP00000035361	La	PF05383.17	7.2e-21	1	1
ENSGAGP00000035358	La	PF05383.17	1e-20	1	1
ENSGAGP00000035356	La	PF05383.17	1.1e-20	1	1
ENSGAGP00000035354	La	PF05383.17	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000040034	LARP1-202	3222	-	ENSGAGP00000035356	1073 (aa)	-	-
ENSGAGT00000040036	LARP1-203	3162	-	ENSGAGP00000035358	1053 (aa)	-	-
ENSGAGT00000040038	LARP1-204	2643	-	ENSGAGP00000035360	880 (aa)	-	-
ENSGAGT00000040039	LARP1-205	2926	-	ENSGAGP00000035361	892 (aa)	-	-
ENSGAGT00000040032	LARP1-201	3306	-	ENSGAGP00000035354	1101 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000025113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000025113's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000025113	LARP1	91	66.387	ENSGAGG00000017209	LARP1B	89	62.578

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000025113	LARP1	99	80.744	ENSG00000155506	LARP1	100	84.018	Homo_sapiens
ENSGAGG00000025113	LARP1	88	83.857	ENSAPOG00000020685	larp1	98	85.514	Acanthochromis_polyacanthus
ENSGAGG00000025113	LARP1	99	80.895	ENSAMEG00000016673	LARP1	100	80.849	Ailuropoda_melanoleuca
ENSGAGG00000025113	LARP1	94	76.872	ENSACIG00000012994	larp1	96	77.476	Amphilophus_citrinellus
ENSGAGG00000025113	LARP1	90	74.380	ENSAOCG00000007792	larp1	96	75.795	Amphiprion_ocellaris
ENSGAGG00000025113	LARP1	96	76.092	ENSAPEG00000022246	larp1	97	70.388	Amphiprion_percula
ENSGAGG00000025113	LARP1	95	73.441	ENSATEG00000013523	larp1	96	69.260	Anabas_testudineus
ENSGAGG00000025113	LARP1	91	92.721	ENSAPLG00000007559	LARP1	99	93.402	Anas_platyrhynchos
ENSGAGG00000025113	LARP1	97	90.192	ENSACAG00000004071	LARP1	100	89.402	Anolis_carolinensis
ENSGAGG00000025113	LARP1	99	80.853	ENSANAG00000029949	LARP1	100	77.273	Aotus_nancymaae
ENSGAGG00000025113	LARP1	98	72.757	ENSACLG00000015256	larp1	99	70.151	Astatotilapia_calliptera
ENSGAGG00000025113	LARP1	93	77.485	ENSAMXG00000000859	larp1	97	70.946	Astyanax_mexicanus
ENSGAGG00000025113	LARP1	99	80.963	ENSBTAG00000008443	LARP1	100	75.878	Bos_taurus
ENSGAGG00000025113	LARP1	99	80.963	ENSCJAG00000004454	LARP1	98	78.261	Callithrix_jacchus
ENSGAGG00000025113	LARP1	99	80.874	ENSCAFG00000017639	LARP1	99	80.893	Canis_familiaris
ENSGAGG00000025113	LARP1	97	80.952	ENSCAFG00020023860	LARP1	100	81.326	Canis_lupus_dingo
ENSGAGG00000025113	LARP1	99	80.853	ENSCHIG00000014414	LARP1	100	74.862	Capra_hircus
ENSGAGG00000025113	LARP1	99	80.963	ENSTSYG00000013732	LARP1	99	78.252	Carlito_syrichta
ENSGAGG00000025113	LARP1	90	81.100	ENSCAPG00000013865	LARP1	86	81.517	Cavia_aperea
ENSGAGG00000025113	LARP1	99	80.849	ENSCPOG00000003377	LARP1	100	81.101	Cavia_porcellus
ENSGAGG00000025113	LARP1	99	80.853	ENSCCAG00000025201	LARP1	100	75.700	Cebus_capucinus
ENSGAGG00000025113	LARP1	99	80.525	ENSCATG00000030675	LARP1	94	80.311	Cercocebus_atys
ENSGAGG00000025113	LARP1	99	81.175	ENSCLAG00000012755	LARP1	99	79.536	Chinchilla_lanigera
ENSGAGG00000025113	LARP1	97	77.778	ENSCSAG00000010800	LARP1	100	77.802	Chlorocebus_sabaeus
ENSGAGG00000025113	LARP1	89	75.403	ENSCHOG00000012716	LARP1	91	75.294	Choloepus_hoffmanni
ENSGAGG00000025113	LARP1	99	98.309	ENSCPBG00000002173	LARP1	100	96.711	Chrysemys_picta_bellii
ENSGAGG00000025113	LARP1	99	80.744	ENSCANG00000037418	LARP1	94	80.518	Colobus_angolensis_palliatus
ENSGAGG00000025113	LARP1	99	80.610	ENSCGRG00001016913	Larp1	100	76.895	Cricetulus_griseus_chok1gshd
ENSGAGG00000025113	LARP1	94	78.809	ENSCGRG00000009916	Larp1	99	78.890	Cricetulus_griseus_crigri
ENSGAGG00000025113	LARP1	94	74.400	ENSCSEG00000016431	larp1	97	69.520	Cynoglossus_semilaevis
ENSGAGG00000025113	LARP1	95	73.672	ENSCVAG00000022687	larp1	96	69.397	Cyprinodon_variegatus
ENSGAGG00000025113	LARP1	94	71.328	ENSDARG00000101722	larp1	97	65.494	Danio_rerio
ENSGAGG00000025113	LARP1	99	80.761	ENSDNOG00000012073	LARP1	100	76.036	Dasypus_novemcinctus
ENSGAGG00000025113	LARP1	100	77.657	ENSDORG00000002897	Larp1	99	78.505	Dipodomys_ordii
ENSGAGG00000025113	LARP1	91	83.333	ENSETEG00000020251	LARP1	100	83.447	Echinops_telfairi
ENSGAGG00000025113	LARP1	99	80.786	ENSEASG00005001070	LARP1	100	84.800	Equus_asinus_asinus
ENSGAGG00000025113	LARP1	99	80.786	ENSECAG00000017002	LARP1	78	84.800	Equus_caballus
ENSGAGG00000025113	LARP1	99	76.451	ENSEEUG00000001065	LARP1	100	76.964	Erinaceus_europaeus
ENSGAGG00000025113	LARP1	98	72.216	ENSELUG00000019403	larp1	99	67.062	Esox_lucius
ENSGAGG00000025113	LARP1	99	80.849	ENSFCAG00000000592	LARP1	100	75.853	Felis_catus
ENSGAGG00000025113	LARP1	91	92.543	ENSFALG00000008335	LARP1	100	93.154	Ficedula_albicollis
ENSGAGG00000025113	LARP1	99	80.874	ENSFDAG00000021125	LARP1	100	80.769	Fukomys_damarensis
ENSGAGG00000025113	LARP1	62	61.103	ENSFHEG00000020307	larp1	92	68.902	Fundulus_heteroclitus
ENSGAGG00000025113	LARP1	99	93.138	ENSGALG00000040109	LARP1	100	86.854	Gallus_gallus
ENSGAGG00000025113	LARP1	99	80.744	ENSGGOG00000006048	LARP1	93	80.582	Gorilla_gorilla
ENSGAGG00000025113	LARP1	98	73.267	ENSHBUG00000020762	larp1	98	73.434	Haplochromis_burtoni
ENSGAGG00000025113	LARP1	99	80.786	ENSHGLG00000006267	LARP1	100	75.273	Heterocephalus_glaber_female
ENSGAGG00000025113	LARP1	95	69.515	ENSHGLG00100003395	-	95	66.077	Heterocephalus_glaber_male
ENSGAGG00000025113	LARP1	99	80.786	ENSHGLG00100014230	-	100	80.893	Heterocephalus_glaber_male
ENSGAGG00000025113	LARP1	92	83.500	ENSHCOG00000010786	larp1	97	84.518	Hippocampus_comes
ENSGAGG00000025113	LARP1	94	71.311	ENSIPUG00000019105	Larp1	98	66.341	Ictalurus_punctatus
ENSGAGG00000025113	LARP1	100	77.766	ENSSTOG00000005678	LARP1	99	78.401	Ictidomys_tridecemlineatus
ENSGAGG00000025113	LARP1	99	75.764	ENSJJAG00000016950	Larp1	100	73.469	Jaculus_jaculus
ENSGAGG00000025113	LARP1	97	73.341	ENSKMAG00000018468	larp1	95	71.954	Kryptolebias_marmoratus
ENSGAGG00000025113	LARP1	97	74.828	ENSLBEG00000027172	larp1	99	68.529	Labrus_bergylta
ENSGAGG00000025113	LARP1	89	82.375	ENSLOCG00000012457	larp1	99	75.380	Lepisosteus_oculatus
ENSGAGG00000025113	LARP1	99	79.610	ENSLAFG00000008991	LARP1	100	75.755	Loxodonta_africana
ENSGAGG00000025113	LARP1	99	80.197	ENSMFAG00000031651	LARP1	94	80.000	Macaca_fascicularis
ENSGAGG00000025113	LARP1	100	76.630	ENSMMUG00000009411	LARP1	100	84.475	Macaca_mulatta
ENSGAGG00000025113	LARP1	99	80.306	ENSMNEG00000039294	LARP1	100	80.266	Macaca_nemestrina
ENSGAGG00000025113	LARP1	99	80.635	ENSMLEG00000035142	LARP1	94	80.415	Mandrillus_leucophaeus
ENSGAGG00000025113	LARP1	95	77.427	ENSMAMG00000021788	larp1	97	69.415	Mastacembelus_armatus
ENSGAGG00000025113	LARP1	98	72.757	ENSMZEG00005009345	larp1	99	70.151	Maylandia_zebra
ENSGAGG00000025113	LARP1	99	91.759	ENSMGAG00000005696	LARP1	100	90.756	Meleagris_gallopavo
ENSGAGG00000025113	LARP1	99	80.610	ENSMAUG00000001385	Larp1	100	76.617	Mesocricetus_auratus
ENSGAGG00000025113	LARP1	99	79.674	ENSMICG00000000837	LARP1	99	84.739	Microcebus_murinus
ENSGAGG00000025113	LARP1	99	80.610	ENSMOCG00000008920	Larp1	100	76.930	Microtus_ochrogaster
ENSGAGG00000025113	LARP1	88	58.971	ENSMMOG00000013364	larp1	95	55.699	Mola_mola
ENSGAGG00000025113	LARP1	99	84.523	ENSMODG00000008663	LARP1	99	83.837	Monodelphis_domestica
ENSGAGG00000025113	LARP1	97	73.696	ENSMALG00000017180	larp1	95	71.815	Monopterus_albus
ENSGAGG00000025113	LARP1	99	80.392	MGP_CAROLIEiJ_G0016383	Larp1	100	76.838	Mus_caroli
ENSGAGG00000025113	LARP1	97	81.215	ENSMUSG00000037331	Larp1	99	77.488	Mus_musculus
ENSGAGG00000025113	LARP1	99	80.392	MGP_PahariEiJ_G0017518	Larp1	100	76.606	Mus_pahari
ENSGAGG00000025113	LARP1	97	81.215	MGP_SPRETEiJ_G0017225	Larp1	99	77.488	Mus_spretus
ENSGAGG00000025113	LARP1	76	81.601	ENSMPUG00000013564	LARP1	99	75.275	Mustela_putorius_furo
ENSGAGG00000025113	LARP1	97	77.692	ENSMLUG00000002608	LARP1	100	77.615	Myotis_lucifugus
ENSGAGG00000025113	LARP1	100	76.732	ENSNGAG00000001098	Larp1	99	77.640	Nannospalax_galili
ENSGAGG00000025113	LARP1	94	74.648	ENSNBRG00000008963	larp1	94	72.545	Neolamprologus_brichardi
ENSGAGG00000025113	LARP1	99	79.493	ENSNLEG00000016588	LARP1	99	76.691	Nomascus_leucogenys
ENSGAGG00000025113	LARP1	99	79.933	ENSMEUG00000002957	LARP1	100	77.287	Notamacropus_eugenii
ENSGAGG00000025113	LARP1	99	80.786	ENSOPRG00000013014	LARP1	100	80.685	Ochotona_princeps
ENSGAGG00000025113	LARP1	99	81.223	ENSODEG00000010824	LARP1	100	81.308	Octodon_degus
ENSGAGG00000025113	LARP1	98	72.747	ENSONIG00000017308	larp1	99	68.608	Oreochromis_niloticus
ENSGAGG00000025113	LARP1	98	88.631	ENSOANG00000005096	LARP1	100	86.318	Ornithorhynchus_anatinus
ENSGAGG00000025113	LARP1	99	81.332	ENSOCUG00000013066	LARP1	100	77.260	Oryctolagus_cuniculus
ENSGAGG00000025113	LARP1	97	72.222	ENSORLG00000000824	larp1	96	76.005	Oryzias_latipes
ENSGAGG00000025113	LARP1	97	72.333	ENSORLG00020022241	larp1	97	68.302	Oryzias_latipes_hni
ENSGAGG00000025113	LARP1	97	70.222	ENSORLG00015007538	larp1	97	66.698	Oryzias_latipes_hsok
ENSGAGG00000025113	LARP1	95	71.429	ENSOMEG00000003134	larp1	97	67.331	Oryzias_melastigma
ENSGAGG00000025113	LARP1	99	80.786	ENSOGAG00000016750	LARP1	100	80.374	Otolemur_garnettii
ENSGAGG00000025113	LARP1	99	79.103	ENSOARG00000009893	LARP1	99	78.876	Ovis_aries
ENSGAGG00000025113	LARP1	99	80.744	ENSPPAG00000042993	LARP1	94	80.518	Pan_paniscus
ENSGAGG00000025113	LARP1	99	79.325	ENSPPRG00000009780	LARP1	95	77.597	Panthera_pardus
ENSGAGG00000025113	LARP1	99	79.325	ENSPTIG00000007013	LARP1	95	77.902	Panthera_tigris_altaica
ENSGAGG00000025113	LARP1	99	80.525	ENSPTRG00000017447	LARP1	94	80.311	Pan_troglodytes
ENSGAGG00000025113	LARP1	99	80.525	ENSPANG00000008080	LARP1	94	80.311	Papio_anubis
ENSGAGG00000025113	LARP1	94	76.135	ENSPKIG00000010096	larp1	97	71.100	Paramormyrops_kingsleyae
ENSGAGG00000025113	LARP1	94	71.311	ENSPKIG00000017153	-	99	65.010	Paramormyrops_kingsleyae
ENSGAGG00000025113	LARP1	92	73.077	ENSPMGG00000011599	larp1	98	68.222	Periophthalmus_magnuspinnatus
ENSGAGG00000025113	LARP1	100	77.056	ENSPEMG00000022523	Larp1	99	77.651	Peromyscus_maniculatus_bairdii
ENSGAGG00000025113	LARP1	95	87.703	ENSPCIG00000019242	LARP1	89	90.286	Phascolarctos_cinereus
ENSGAGG00000025113	LARP1	93	73.933	ENSPFOG00000005836	larp1	99	66.012	Poecilia_formosa
ENSGAGG00000025113	LARP1	93	73.818	ENSPLAG00000008936	larp1	99	66.788	Poecilia_latipinna
ENSGAGG00000025113	LARP1	93	74.190	ENSPMEG00000013656	larp1	99	66.190	Poecilia_mexicana
ENSGAGG00000025113	LARP1	93	73.678	ENSPREG00000005726	larp1	97	69.089	Poecilia_reticulata
ENSGAGG00000025113	LARP1	99	78.166	ENSPCAG00000006407	LARP1	100	78.125	Procavia_capensis
ENSGAGG00000025113	LARP1	99	72.707	ENSPCOG00000016949	LARP1	100	76.012	Propithecus_coquereli
ENSGAGG00000025113	LARP1	99	80.349	ENSPVAG00000002262	LARP1	100	75.180	Pteropus_vampyrus
ENSGAGG00000025113	LARP1	98	72.867	ENSPNYG00000007938	larp1	99	70.251	Pundamilia_nyererei
ENSGAGG00000025113	LARP1	98	73.151	ENSPNAG00000021427	larp1	99	69.614	Pygocentrus_nattereri
ENSGAGG00000025113	LARP1	100	77.381	ENSRNOG00000031544	Larp1	99	77.882	Rattus_norvegicus
ENSGAGG00000025113	LARP1	99	80.635	ENSRBIG00000038005	LARP1	94	80.415	Rhinopithecus_bieti
ENSGAGG00000025113	LARP1	99	80.635	ENSRROG00000034073	LARP1	100	80.599	Rhinopithecus_roxellana
ENSGAGG00000025113	LARP1	99	80.853	ENSSBOG00000019816	LARP1	100	77.985	Saimiri_boliviensis_boliviensis
ENSGAGG00000025113	LARP1	99	86.173	ENSSHAG00000011115	LARP1	100	85.310	Sarcophilus_harrisii
ENSGAGG00000025113	LARP1	93	73.714	ENSSFOG00015020304	larp1	93	70.351	Scleropages_formosus
ENSGAGG00000025113	LARP1	95	75.498	ENSSFOG00015018058	-	97	68.726	Scleropages_formosus
ENSGAGG00000025113	LARP1	90	74.690	ENSSMAG00000007468	larp1	98	68.281	Scophthalmus_maximus
ENSGAGG00000025113	LARP1	95	74.439	ENSSDUG00000000268	larp1	94	74.522	Seriola_dumerili
ENSGAGG00000025113	LARP1	94	73.888	ENSSLDG00000016505	larp1	94	74.761	Seriola_lalandi_dorsalis
ENSGAGG00000025113	LARP1	67	84.083	ENSSARG00000013907	-	88	84.775	Sorex_araneus
ENSGAGG00000025113	LARP1	99	93.687	ENSSPUG00000012179	-	100	91.222	Sphenodon_punctatus
ENSGAGG00000025113	LARP1	97	73.760	ENSSPAG00000003910	larp1	99	67.931	Stegastes_partitus
ENSGAGG00000025113	LARP1	99	80.543	ENSSSCG00000017069	LARP1	100	80.994	Sus_scrofa
ENSGAGG00000025113	LARP1	95	89.817	ENSTGUG00000000704	LARP1	99	90.779	Taeniopygia_guttata
ENSGAGG00000025113	LARP1	96	74.971	ENSTRUG00000009470	larp1	99	67.093	Takifugu_rubripes
ENSGAGG00000025113	LARP1	91	81.429	ENSTBEG00000003381	LARP1	100	81.398	Tupaia_belangeri
ENSGAGG00000025113	LARP1	99	80.631	ENSTTRG00000015934	LARP1	100	80.685	Tursiops_truncatus
ENSGAGG00000025113	LARP1	99	80.786	ENSUAMG00000019334	LARP1	100	75.763	Ursus_americanus
ENSGAGG00000025113	LARP1	98	78.895	ENSUMAG00000002934	LARP1	96	82.448	Ursus_maritimus
ENSGAGG00000025113	LARP1	97	80.952	ENSVVUG00000004644	LARP1	100	81.326	Vulpes_vulpes
ENSGAGG00000025113	LARP1	99	80.820	ENSXETG00000008413	larp1	100	75.327	Xenopus_tropicalis
ENSGAGG00000025113	LARP1	85	75.034	ENSXCOG00000004022	larp1	98	74.763	Xiphophorus_couchianus
ENSGAGG00000025113	LARP1	96	72.018	ENSXMAG00000018780	larp1	99	66.039	Xiphophorus_maculatus