EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000025188 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 96444 bases
Position: chrPPEB01002841.1:9191-105634
Accession: 29190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000035426	Ago_hook	PF10427.9	3.6e-15	1	1
ENSGAGP00000035428	Ago_hook	PF10427.9	5.8e-15	1	1
ENSGAGP00000035422	Ago_hook	PF10427.9	1.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000040116	TNRC6B-204	5323	-	ENSGAGP00000035428	1732 (aa)	-	-
ENSGAGT00000040114	TNRC6B-203	5470	-	ENSGAGP00000035426	1781 (aa)	-	-
ENSGAGT00000040111	TNRC6B-202	5482	-	ENSGAGP00000035423	1785 (aa)	-	-
ENSGAGT00000040110	TNRC6B-201	5641	-	ENSGAGP00000035422	1838 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000025188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000025188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000025188	TNRC6B	90	38.148	ENSGAGG00000022043	TNRC6C	99	37.493
ENSGAGG00000025188	TNRC6B	90	38.047	ENSGAGG00000023209	TNRC6A	98	37.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000025188	TNRC6B	98	89.247	ENSG00000100354	TNRC6B	99	89.301	Homo_sapiens
ENSGAGG00000025188	TNRC6B	98	88.810	ENSAMEG00000011025	TNRC6B	99	89.192	Ailuropoda_melanoleuca
ENSGAGG00000025188	TNRC6B	97	88.876	ENSAPLG00000009347	TNRC6B	100	88.761	Anas_platyrhynchos
ENSGAGG00000025188	TNRC6B	99	75.785	ENSACAG00000007281	TNRC6B	99	76.212	Anolis_carolinensis
ENSGAGG00000025188	TNRC6B	98	88.755	ENSANAG00000035042	TNRC6B	99	89.138	Aotus_nancymaae
ENSGAGG00000025188	TNRC6B	71	47.673	ENSAMXG00000008707	tnrc6b	92	38.364	Astyanax_mexicanus
ENSGAGG00000025188	TNRC6B	99	87.432	ENSBTAG00000021076	TNRC6B	99	87.691	Bos_taurus
ENSGAGG00000025188	TNRC6B	98	88.325	ENSCJAG00000002732	TNRC6B	99	96.056	Callithrix_jacchus
ENSGAGG00000025188	TNRC6B	98	88.357	ENSCAFG00000001255	TNRC6B	99	88.575	Canis_familiaris
ENSGAGG00000025188	TNRC6B	98	87.634	ENSCAFG00020002189	TNRC6B	98	88.027	Canis_lupus_dingo
ENSGAGG00000025188	TNRC6B	98	86.959	ENSCHIG00000003491	TNRC6B	99	87.296	Capra_hircus
ENSGAGG00000025188	TNRC6B	98	88.470	ENSTSYG00000011836	TNRC6B	99	88.525	Carlito_syrichta
ENSGAGG00000025188	TNRC6B	98	87.416	ENSCPOG00000005705	TNRC6B	99	87.472	Cavia_porcellus
ENSGAGG00000025188	TNRC6B	98	87.439	ENSCCAG00000019912	TNRC6B	99	87.657	Cebus_capucinus
ENSGAGG00000025188	TNRC6B	98	88.531	ENSCATG00000029291	TNRC6B	99	88.781	Cercocebus_atys
ENSGAGG00000025188	TNRC6B	98	87.345	ENSCLAG00000016942	TNRC6B	97	87.683	Chinchilla_lanigera
ENSGAGG00000025188	TNRC6B	98	85.006	ENSCSAG00000006021	TNRC6B	99	84.949	Chlorocebus_sabaeus
ENSGAGG00000025188	TNRC6B	91	96.044	ENSCPBG00000022932	TNRC6B	100	96.044	Chrysemys_picta_bellii
ENSGAGG00000025188	TNRC6B	98	89.022	ENSCANG00000030776	TNRC6B	99	89.077	Colobus_angolensis_palliatus
ENSGAGG00000025188	TNRC6B	95	86.366	ENSCGRG00001020166	Tnrc6b	97	86.308	Cricetulus_griseus_chok1gshd
ENSGAGG00000025188	TNRC6B	98	86.486	ENSCGRG00000016696	Tnrc6b	99	86.543	Cricetulus_griseus_crigri
ENSGAGG00000025188	TNRC6B	100	87.375	ENSDNOG00000012744	TNRC6B	99	88.507	Dasypus_novemcinctus
ENSGAGG00000025188	TNRC6B	98	87.718	ENSDORG00000003386	Tnrc6b	97	87.944	Dipodomys_ordii
ENSGAGG00000025188	TNRC6B	98	77.408	ENSETEG00000006570	TNRC6B	99	78.028	Echinops_telfairi
ENSGAGG00000025188	TNRC6B	98	87.964	ENSEASG00005005306	TNRC6B	99	88.359	Equus_asinus_asinus
ENSGAGG00000025188	TNRC6B	94	94.000	ENSECAG00000009759	TNRC6B	99	94.000	Equus_caballus
ENSGAGG00000025188	TNRC6B	58	92.674	ENSEEUG00000008690	-	60	92.674	Erinaceus_europaeus
ENSGAGG00000025188	TNRC6B	98	88.254	ENSFCAG00000004791	TNRC6B	99	88.635	Felis_catus
ENSGAGG00000025188	TNRC6B	94	91.898	ENSFALG00000012195	TNRC6B	100	91.898	Ficedula_albicollis
ENSGAGG00000025188	TNRC6B	98	87.901	ENSFDAG00000021368	TNRC6B	97	88.239	Fukomys_damarensis
ENSGAGG00000025188	TNRC6B	99	92.096	ENSGALG00000012050	TNRC6B	98	92.096	Gallus_gallus
ENSGAGG00000025188	TNRC6B	98	89.192	ENSGGOG00000008444	TNRC6B	99	89.247	Gorilla_gorilla
ENSGAGG00000025188	TNRC6B	98	87.602	ENSHGLG00000009306	TNRC6B	100	87.528	Heterocephalus_glaber_female
ENSGAGG00000025188	TNRC6B	98	87.711	ENSHGLG00100018108	TNRC6B	98	87.430	Heterocephalus_glaber_male
ENSGAGG00000025188	TNRC6B	79	44.038	ENSIPUG00000001515	tnrc6b	94	45.519	Ictalurus_punctatus
ENSGAGG00000025188	TNRC6B	98	87.606	ENSSTOG00000008927	TNRC6B	97	87.944	Ictidomys_tridecemlineatus
ENSGAGG00000025188	TNRC6B	98	86.922	ENSJJAG00000015779	Tnrc6b	97	86.922	Jaculus_jaculus
ENSGAGG00000025188	TNRC6B	99	61.884	ENSLACG00000000628	-	99	62.025	Latimeria_chalumnae
ENSGAGG00000025188	TNRC6B	77	88.464	ENSLAFG00000014473	TNRC6B	100	89.093	Loxodonta_africana
ENSGAGG00000025188	TNRC6B	98	88.585	ENSMFAG00000003862	TNRC6B	99	88.838	Macaca_fascicularis
ENSGAGG00000025188	TNRC6B	98	88.839	ENSMMUG00000021345	TNRC6B	97	88.694	Macaca_mulatta
ENSGAGG00000025188	TNRC6B	97	88.680	ENSMNEG00000042745	TNRC6B	99	88.737	Macaca_nemestrina
ENSGAGG00000025188	TNRC6B	98	89.132	ENSMLEG00000041780	TNRC6B	99	89.186	Mandrillus_leucophaeus
ENSGAGG00000025188	TNRC6B	99	92.849	ENSMGAG00000012333	TNRC6B	99	92.485	Meleagris_gallopavo
ENSGAGG00000025188	TNRC6B	99	86.159	ENSMAUG00000016123	Tnrc6b	99	86.215	Mesocricetus_auratus
ENSGAGG00000025188	TNRC6B	98	88.550	ENSMICG00000014056	TNRC6B	99	88.604	Microcebus_murinus
ENSGAGG00000025188	TNRC6B	95	91.500	ENSMOCG00000020334	Tnrc6b	97	91.500	Microtus_ochrogaster
ENSGAGG00000025188	TNRC6B	98	86.986	MGP_CAROLIEiJ_G0020043	Tnrc6b	97	86.930	Mus_caroli
ENSGAGG00000025188	TNRC6B	98	86.930	ENSMUSG00000047888	Tnrc6b	97	86.873	Mus_musculus
ENSGAGG00000025188	TNRC6B	98	86.930	MGP_PahariEiJ_G0020045	Tnrc6b	97	86.873	Mus_pahari
ENSGAGG00000025188	TNRC6B	98	87.500	MGP_SPRETEiJ_G0020941	Tnrc6b	97	87.445	Mus_spretus
ENSGAGG00000025188	TNRC6B	96	91.985	ENSMPUG00000016442	TNRC6B	96	92.161	Mustela_putorius_furo
ENSGAGG00000025188	TNRC6B	98	88.300	ENSMLUG00000008765	TNRC6B	99	88.628	Myotis_lucifugus
ENSGAGG00000025188	TNRC6B	98	86.917	ENSNGAG00000021294	Tnrc6b	97	87.198	Nannospalax_galili
ENSGAGG00000025188	TNRC6B	88	88.458	ENSNLEG00000015311	TNRC6B	95	90.012	Nomascus_leucogenys
ENSGAGG00000025188	TNRC6B	89	83.478	ENSOPRG00000012054	TNRC6B	88	83.478	Ochotona_princeps
ENSGAGG00000025188	TNRC6B	98	87.746	ENSODEG00000013146	TNRC6B	97	88.083	Octodon_degus
ENSGAGG00000025188	TNRC6B	93	43.049	ENSONIG00000019679	-	99	41.062	Oreochromis_niloticus
ENSGAGG00000025188	TNRC6B	98	87.641	ENSOCUG00000016128	TNRC6B	97	88.093	Oryctolagus_cuniculus
ENSGAGG00000025188	TNRC6B	98	88.181	ENSOGAG00000011096	TNRC6B	99	88.235	Otolemur_garnettii
ENSGAGG00000025188	TNRC6B	98	86.849	ENSOARG00000017238	TNRC6B	98	87.039	Ovis_aries
ENSGAGG00000025188	TNRC6B	98	89.247	ENSPPAG00000028514	TNRC6B	99	89.301	Pan_paniscus
ENSGAGG00000025188	TNRC6B	98	88.592	ENSPPRG00000017741	TNRC6B	99	88.974	Panthera_pardus
ENSGAGG00000025188	TNRC6B	99	83.866	ENSPTIG00000022064	TNRC6B	98	86.230	Panthera_tigris_altaica
ENSGAGG00000025188	TNRC6B	98	89.241	ENSPTRG00000047826	TNRC6B	99	89.295	Pan_troglodytes
ENSGAGG00000025188	TNRC6B	97	82.715	ENSPANG00000009271	TNRC6B	99	85.484	Papio_anubis
ENSGAGG00000025188	TNRC6B	98	95.341	ENSPSIG00000005318	TNRC6B	99	95.398	Pelodiscus_sinensis
ENSGAGG00000025188	TNRC6B	98	86.333	ENSPEMG00000011403	Tnrc6b	97	86.727	Peromyscus_maniculatus_bairdii
ENSGAGG00000025188	TNRC6B	98	85.118	ENSPCIG00000020347	TNRC6B	99	85.448	Phascolarctos_cinereus
ENSGAGG00000025188	TNRC6B	75	49.474	ENSPFOG00000006033	-	99	40.255	Poecilia_formosa
ENSGAGG00000025188	TNRC6B	77	53.465	ENSPMEG00000006371	-	90	52.983	Poecilia_mexicana
ENSGAGG00000025188	TNRC6B	98	83.998	ENSPPYG00000011849	TNRC6B	100	86.283	Pongo_abelii
ENSGAGG00000025188	TNRC6B	72	85.246	ENSPCAG00000008739	TNRC6B	74	84.105	Procavia_capensis
ENSGAGG00000025188	TNRC6B	98	88.659	ENSPCOG00000020790	TNRC6B	99	88.713	Propithecus_coquereli
ENSGAGG00000025188	TNRC6B	92	88.258	ENSPVAG00000004975	TNRC6B	91	88.258	Pteropus_vampyrus
ENSGAGG00000025188	TNRC6B	75	45.848	ENSPNAG00000011713	tnrc6b	74	46.102	Pygocentrus_nattereri
ENSGAGG00000025188	TNRC6B	98	86.338	ENSRNOG00000024907	Tnrc6b	98	86.082	Rattus_norvegicus
ENSGAGG00000025188	TNRC6B	98	88.968	ENSRBIG00000035576	TNRC6B	99	89.022	Rhinopithecus_bieti
ENSGAGG00000025188	TNRC6B	98	88.913	ENSRROG00000031135	TNRC6B	99	88.968	Rhinopithecus_roxellana
ENSGAGG00000025188	TNRC6B	96	88.592	ENSSBOG00000029743	TNRC6B	98	88.982	Saimiri_boliviensis_boliviensis
ENSGAGG00000025188	TNRC6B	98	85.131	ENSSHAG00000009692	TNRC6B	99	85.403	Sarcophilus_harrisii
ENSGAGG00000025188	TNRC6B	64	91.216	ENSSARG00000007971	-	70	80.342	Sorex_araneus
ENSGAGG00000025188	TNRC6B	91	91.711	ENSSPUG00000010801	TNRC6B	100	91.413	Sphenodon_punctatus
ENSGAGG00000025188	TNRC6B	99	87.542	ENSSSCG00000000078	TNRC6B	99	88.282	Sus_scrofa
ENSGAGG00000025188	TNRC6B	92	88.075	ENSTGUG00000010138	-	99	85.413	Taeniopygia_guttata
ENSGAGG00000025188	TNRC6B	93	90.833	ENSTTRG00000011465	TNRC6B	95	90.833	Tursiops_truncatus
ENSGAGG00000025188	TNRC6B	99	86.935	ENSUAMG00000007174	TNRC6B	98	88.851	Ursus_americanus
ENSGAGG00000025188	TNRC6B	97	88.409	ENSUMAG00000014336	TNRC6B	100	88.654	Ursus_maritimus
ENSGAGG00000025188	TNRC6B	64	97.710	ENSVPAG00000001467	TNRC6B	66	97.710	Vicugna_pacos
ENSGAGG00000025188	TNRC6B	98	88.501	ENSVVUG00000007064	TNRC6B	99	88.583	Vulpes_vulpes