EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000025230 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 57896 bases
Position: chrPPEB01000449.1:10139-68034
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000035487	DEAD	PF00270.29	1.8e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000040191	-	1911	-	ENSGAGP00000035487	636 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000025230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000025230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000025230	-	54	30.769	ENSGAGG00000014403	DDX55	65	30.769
ENSGAGG00000025230	-	54	31.373	ENSGAGG00000015750	DDX25	83	31.933
ENSGAGG00000025230	-	58	37.333	ENSGAGG00000023801	DDX47	74	37.333
ENSGAGG00000025230	-	56	33.146	ENSGAGG00000020608	DDX6	72	33.146
ENSGAGG00000025230	-	62	39.467	ENSGAGG00000004207	-	63	38.515
ENSGAGG00000025230	-	60	30.180	ENSGAGG00000012482	DDX31	61	30.180
ENSGAGG00000025230	-	68	44.773	ENSGAGG00000020790	DDX5	71	44.773
ENSGAGG00000025230	-	59	31.662	ENSGAGG00000005277	EIF4A1	93	31.662
ENSGAGG00000025230	-	58	30.053	ENSGAGG00000007527	DDX39A	86	30.053
ENSGAGG00000025230	-	67	32.028	ENSGAGG00000021228	DDX59	67	32.028
ENSGAGG00000025230	-	56	33.333	ENSGAGG00000016434	EIF4A3	87	33.333
ENSGAGG00000025230	-	54	36.723	ENSGAGG00000022213	DDX49	72	36.723
ENSGAGG00000025230	-	59	32.718	ENSGAGG00000019478	EIF4A2	92	32.448
ENSGAGG00000025230	-	55	30.411	ENSGAGG00000015704	-	70	30.411
ENSGAGG00000025230	-	65	31.221	ENSGAGG00000007234	DDX52	69	31.333
ENSGAGG00000025230	-	61	36.038	ENSGAGG00000001296	DDX27	57	35.862
ENSGAGG00000025230	-	61	38.596	ENSGAGG00000018601	DDX41	68	38.596
ENSGAGG00000025230	-	69	44.921	ENSGAGG00000021204	-	67	44.921
ENSGAGG00000025230	-	60	41.787	ENSGAGG00000007790	DDX23	51	41.587
ENSGAGG00000025230	-	51	35.650	ENSGAGG00000022169	-	50	36.196

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000025230	-	74	70.539	ENSAPOG00000001712	ddx43	68	70.082	Acanthochromis_polyacanthus
ENSGAGG00000025230	-	66	69.617	ENSACIG00000012170	ddx43	67	68.519	Amphilophus_citrinellus
ENSGAGG00000025230	-	81	63.066	ENSAOCG00000001331	ddx43	82	62.415	Amphiprion_ocellaris
ENSGAGG00000025230	-	81	63.908	ENSAPEG00000001133	ddx43	81	63.230	Amphiprion_percula
ENSGAGG00000025230	-	97	56.972	ENSATEG00000012664	ddx43	95	56.972	Anabas_testudineus
ENSGAGG00000025230	-	72	85.371	ENSAPLG00000010182	-	95	85.371	Anas_platyrhynchos
ENSGAGG00000025230	-	84	75.000	ENSACAG00000004387	-	99	67.493	Anolis_carolinensis
ENSGAGG00000025230	-	98	55.977	ENSACLG00000026081	ddx43	98	55.429	Astatotilapia_calliptera
ENSGAGG00000025230	-	98	57.544	ENSAMXG00000004457	ddx43	93	57.980	Astyanax_mexicanus
ENSGAGG00000025230	-	68	47.973	WBGene00013214	Y54G11A.3	88	47.973	Caenorhabditis_elegans
ENSGAGG00000025230	-	79	53.176	ENSCVAG00000009980	ddx43	84	53.176	Cyprinodon_variegatus
ENSGAGG00000025230	-	98	59.031	ENSDARG00000022614	ddx43	93	59.031	Danio_rerio
ENSGAGG00000025230	-	69	59.142	FBgn0037549	CG7878	63	59.009	Drosophila_melanogaster
ENSGAGG00000025230	-	75	47.410	ENSETEG00000014626	-	98	46.796	Echinops_telfairi
ENSGAGG00000025230	-	83	62.021	ENSELUG00000012126	ddx43	87	62.021	Esox_lucius
ENSGAGG00000025230	-	99	69.693	ENSFALG00000007042	-	99	69.839	Ficedula_albicollis
ENSGAGG00000025230	-	72	69.978	ENSFHEG00000011226	ddx43	86	68.763	Fundulus_heteroclitus
ENSGAGG00000025230	-	62	75.381	ENSGMOG00000004178	ddx43	86	75.381	Gadus_morhua
ENSGAGG00000025230	-	69	84.897	ENSGALG00000015928	-	99	84.897	Gallus_gallus
ENSGAGG00000025230	-	97	55.572	ENSGAFG00000012622	ddx43	97	54.950	Gambusia_affinis
ENSGAGG00000025230	-	80	62.816	ENSGACG00000012072	ddx43	100	60.757	Gasterosteus_aculeatus
ENSGAGG00000025230	-	81	62.021	ENSHBUG00000011653	ddx43	98	55.365	Haplochromis_burtoni
ENSGAGG00000025230	-	98	56.079	ENSHCOG00000014704	ddx43	96	56.231	Hippocampus_comes
ENSGAGG00000025230	-	99	56.604	ENSIPUG00000023423	ddx43	98	57.329	Ictalurus_punctatus
ENSGAGG00000025230	-	98	55.313	ENSKMAG00000016167	ddx43	95	55.313	Kryptolebias_marmoratus
ENSGAGG00000025230	-	98	55.917	ENSLBEG00000007913	ddx43	96	55.786	Labrus_bergylta
ENSGAGG00000025230	-	70	72.074	ENSLACG00000000741	ddx43	100	72.074	Latimeria_chalumnae
ENSGAGG00000025230	-	98	58.258	ENSLOCG00000016170	ddx43	96	58.258	Lepisosteus_oculatus
ENSGAGG00000025230	-	81	61.071	ENSMAMG00000022128	ddx43	83	60.664	Mastacembelus_armatus
ENSGAGG00000025230	-	98	55.977	ENSMZEG00005027349	ddx43	98	55.429	Maylandia_zebra
ENSGAGG00000025230	-	83	73.776	ENSMGAG00000013832	-	99	73.776	Meleagris_gallopavo
ENSGAGG00000025230	-	98	54.720	ENSMMOG00000007346	ddx43	95	54.720	Mola_mola
ENSGAGG00000025230	-	85	59.278	ENSMODG00000014335	-	99	59.278	Monodelphis_domestica
ENSGAGG00000025230	-	87	65.825	ENSMODG00000018546	-	99	61.414	Monodelphis_domestica
ENSGAGG00000025230	-	98	57.911	ENSMALG00000020673	ddx43	97	57.293	Monopterus_albus
ENSGAGG00000025230	-	81	62.832	ENSNBRG00000010942	ddx43	85	62.003	Neolamprologus_brichardi
ENSGAGG00000025230	-	98	56.567	ENSONIG00000001195	ddx43	95	59.968	Oreochromis_niloticus
ENSGAGG00000025230	-	50	71.751	ENSOANG00000006467	-	95	70.137	Ornithorhynchus_anatinus
ENSGAGG00000025230	-	86	58.525	ENSORLG00000002267	ddx43	94	58.525	Oryzias_latipes
ENSGAGG00000025230	-	86	58.525	ENSORLG00020018592	ddx43	94	58.525	Oryzias_latipes_hni
ENSGAGG00000025230	-	86	58.361	ENSORLG00015004854	ddx43	94	58.361	Oryzias_latipes_hsok
ENSGAGG00000025230	-	83	60.818	ENSOMEG00000023418	ddx43	93	59.571	Oryzias_melastigma
ENSGAGG00000025230	-	82	65.432	ENSPKIG00000002941	ddx43	83	64.055	Paramormyrops_kingsleyae
ENSGAGG00000025230	-	90	79.647	ENSPSIG00000002202	-	100	79.647	Pelodiscus_sinensis
ENSGAGG00000025230	-	53	43.264	ENSPMGG00000019854	ddx43	76	48.137	Periophthalmus_magnuspinnatus
ENSGAGG00000025230	-	78	60.038	ENSPCIG00000002492	-	84	60.038	Phascolarctos_cinereus
ENSGAGG00000025230	-	69	78.005	ENSPCIG00000017981	-	99	78.005	Phascolarctos_cinereus
ENSGAGG00000025230	-	81	61.525	ENSPFOG00000004241	ddx43	88	58.842	Poecilia_formosa
ENSGAGG00000025230	-	81	61.592	ENSPLAG00000023362	ddx43	88	59.003	Poecilia_latipinna
ENSGAGG00000025230	-	84	59.539	ENSPMEG00000004870	ddx43	88	58.842	Poecilia_mexicana
ENSGAGG00000025230	-	81	59.199	ENSPREG00000000923	ddx43	87	56.661	Poecilia_reticulata
ENSGAGG00000025230	-	78	62.218	ENSPNYG00000009064	ddx43	79	61.355	Pundamilia_nyererei
ENSGAGG00000025230	-	98	59.111	ENSPNAG00000001232	ddx43	94	58.772	Pygocentrus_nattereri
ENSGAGG00000025230	-	86	64.538	ENSSHAG00000001847	-	99	60.597	Sarcophilus_harrisii
ENSGAGG00000025230	-	82	61.796	ENSSHAG00000016933	-	98	61.796	Sarcophilus_harrisii
ENSGAGG00000025230	-	78	62.453	ENSSFOG00015012193	ddx43	83	62.453	Scleropages_formosus
ENSGAGG00000025230	-	82	62.199	ENSSMAG00000019288	ddx43	80	61.969	Scophthalmus_maximus
ENSGAGG00000025230	-	98	55.783	ENSSDUG00000020120	ddx43	96	55.380	Seriola_dumerili
ENSGAGG00000025230	-	99	55.473	ENSSLDG00000017225	ddx43	94	55.344	Seriola_lalandi_dorsalis
ENSGAGG00000025230	-	72	75.267	ENSSPUG00000018097	-	94	75.267	Sphenodon_punctatus
ENSGAGG00000025230	-	81	63.781	ENSSPAG00000006858	ddx43	83	63.212	Stegastes_partitus
ENSGAGG00000025230	-	84	74.915	ENSTGUG00000012684	-	99	74.915	Taeniopygia_guttata
ENSGAGG00000025230	-	97	53.294	ENSTRUG00000012795	ddx43	99	52.422	Takifugu_rubripes
ENSGAGG00000025230	-	81	60.733	ENSTNIG00000009822	ddx43	97	61.444	Tetraodon_nigroviridis
ENSGAGG00000025230	-	100	62.737	ENSXETG00000011767	ddx43	100	62.737	Xenopus_tropicalis
ENSGAGG00000025230	-	98	58.059	ENSXCOG00000013810	ddx43	96	58.059	Xiphophorus_couchianus
ENSGAGG00000025230	-	84	59.247	ENSXMAG00000017126	ddx43	88	58.720	Xiphophorus_maculatus