EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000025337 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 36628 bases
Position: chrPPEB01001120.1:264090-300717
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000035694	2OG-FeII_Oxy	PF03171.20	2.8e-09	1	1
ENSGAGP00000035692	2OG-FeII_Oxy	PF03171.20	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000040416	-	2073	-	ENSGAGP00000035694	690 (aa)	-	-
ENSGAGT00000040414	-	2046	-	ENSGAGP00000035692	681 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000025337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000025337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000025337	-	77	52.574	ENSGAGG00000022900	P3H1	76	52.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000025337	-	86	74.707	ENSG00000090530	P3H2	100	78.748	Homo_sapiens
ENSGAGG00000025337	-	76	63.619	ENSAPOG00000021463	p3h2	100	63.619	Acanthochromis_polyacanthus
ENSGAGG00000025337	-	80	74.007	ENSAMEG00000000726	P3H2	99	74.007	Ailuropoda_melanoleuca
ENSGAGG00000025337	-	79	63.752	ENSACIG00000012482	p3h2	80	63.752	Amphilophus_citrinellus
ENSGAGG00000025337	-	63	66.819	ENSAOCG00000006595	p3h2	96	66.819	Amphiprion_ocellaris
ENSGAGG00000025337	-	79	63.206	ENSAPEG00000006169	p3h2	80	63.206	Amphiprion_percula
ENSGAGG00000025337	-	79	63.043	ENSATEG00000009514	p3h2	80	63.043	Anabas_testudineus
ENSGAGG00000025337	-	91	70.189	ENSANAG00000021430	P3H2	88	70.189	Aotus_nancymaae
ENSGAGG00000025337	-	80	61.202	ENSACLG00000020074	p3h2	80	62.113	Astatotilapia_calliptera
ENSGAGG00000025337	-	79	62.842	ENSAMXG00000017679	p3h2	80	62.842	Astyanax_mexicanus
ENSGAGG00000025337	-	92	71.429	ENSBTAG00000021025	P3H2	89	71.429	Bos_taurus
ENSGAGG00000025337	-	92	69.859	ENSCJAG00000014239	P3H2	88	69.859	Callithrix_jacchus
ENSGAGG00000025337	-	92	70.487	ENSCAFG00000013985	P3H2	88	70.487	Canis_familiaris
ENSGAGG00000025337	-	92	70.487	ENSCAFG00020020127	P3H2	88	70.487	Canis_lupus_dingo
ENSGAGG00000025337	-	92	71.272	ENSCHIG00000011298	P3H2	88	71.272	Capra_hircus
ENSGAGG00000025337	-	84	73.980	ENSTSYG00000008652	P3H2	100	78.937	Carlito_syrichta
ENSGAGG00000025337	-	79	68.000	ENSCAPG00000012826	P3H2	100	68.000	Cavia_aperea
ENSGAGG00000025337	-	79	77.737	ENSCPOG00000004329	P3H2	95	77.737	Cavia_porcellus
ENSGAGG00000025337	-	89	71.521	ENSCCAG00000034046	P3H2	88	70.173	Cebus_capucinus
ENSGAGG00000025337	-	91	70.662	ENSCATG00000004107	P3H2	88	70.662	Cercocebus_atys
ENSGAGG00000025337	-	81	77.321	ENSCLAG00000012801	P3H2	93	77.321	Chinchilla_lanigera
ENSGAGG00000025337	-	91	70.505	ENSCSAG00000009034	P3H2	88	70.505	Chlorocebus_sabaeus
ENSGAGG00000025337	-	55	88.346	ENSCHOG00000013468	P3H2	53	88.346	Choloepus_hoffmanni
ENSGAGG00000025337	-	81	96.791	ENSCPBG00000012789	P3H2	99	95.691	Chrysemys_picta_bellii
ENSGAGG00000025337	-	86	74.707	ENSCANG00000017978	P3H2	97	74.707	Colobus_angolensis_palliatus
ENSGAGG00000025337	-	91	70.032	ENSCGRG00001021764	P3h2	88	70.032	Cricetulus_griseus_chok1gshd
ENSGAGG00000025337	-	85	74.074	ENSCGRG00000009640	P3h2	95	74.074	Cricetulus_griseus_crigri
ENSGAGG00000025337	-	79	63.024	ENSCSEG00000013736	p3h2	79	63.024	Cynoglossus_semilaevis
ENSGAGG00000025337	-	80	61.749	ENSCVAG00000020470	p3h2	80	62.659	Cyprinodon_variegatus
ENSGAGG00000025337	-	79	64.117	ENSDARG00000103026	p3h2	100	64.000	Danio_rerio
ENSGAGG00000025337	-	92	71.586	ENSDNOG00000035205	P3H2	89	71.586	Dasypus_novemcinctus
ENSGAGG00000025337	-	92	70.394	ENSDORG00000001518	P3h2	88	75.912	Dipodomys_ordii
ENSGAGG00000025337	-	92	71.429	ENSEASG00005000187	P3H2	90	71.429	Equus_asinus_asinus
ENSGAGG00000025337	-	92	71.900	ENSECAG00000008971	P3H2	90	71.900	Equus_caballus
ENSGAGG00000025337	-	92	71.586	ENSFCAG00000000791	P3H2	88	71.586	Felis_catus
ENSGAGG00000025337	-	80	76.250	ENSFALG00000007377	P3H2	96	76.786	Ficedula_albicollis
ENSGAGG00000025337	-	79	64.299	ENSFHEG00000007209	p3h2	79	64.299	Fundulus_heteroclitus
ENSGAGG00000025337	-	76	63.138	ENSGMOG00000009134	p3h2	100	63.138	Gadus_morhua
ENSGAGG00000025337	-	89	76.214	ENSGALG00000040866	P3H2	88	76.214	Gallus_gallus
ENSGAGG00000025337	-	79	63.934	ENSGAFG00000013603	p3h2	80	63.934	Gambusia_affinis
ENSGAGG00000025337	-	76	62.642	ENSGACG00000010066	p3h2	100	62.642	Gasterosteus_aculeatus
ENSGAGG00000025337	-	86	74.707	ENSGGOG00000009749	P3H2	88	70.978	Gorilla_gorilla
ENSGAGG00000025337	-	76	57.034	ENSHBUG00000022967	p3h2	100	57.034	Haplochromis_burtoni
ENSGAGG00000025337	-	91	70.032	ENSHGLG00000019175	P3H2	88	70.032	Heterocephalus_glaber_female
ENSGAGG00000025337	-	79	56.284	ENSHCOG00000019274	p3h2	80	56.284	Hippocampus_comes
ENSGAGG00000025337	-	79	61.020	ENSIPUG00000016970	p3h2	80	61.020	Ictalurus_punctatus
ENSGAGG00000025337	-	91	70.505	ENSSTOG00000006501	P3H2	88	70.505	Ictidomys_tridecemlineatus
ENSGAGG00000025337	-	79	77.778	ENSJJAG00000013941	P3h2	95	77.778	Jaculus_jaculus
ENSGAGG00000025337	-	79	63.570	ENSKMAG00000022098	p3h2	80	63.570	Kryptolebias_marmoratus
ENSGAGG00000025337	-	79	63.934	ENSLBEG00000003942	p3h2	80	63.934	Labrus_bergylta
ENSGAGG00000025337	-	82	66.901	ENSLACG00000014642	P3H2	82	67.782	Latimeria_chalumnae
ENSGAGG00000025337	-	79	67.395	ENSLOCG00000005129	p3h2	79	67.395	Lepisosteus_oculatus
ENSGAGG00000025337	-	92	70.173	ENSLAFG00000007727	P3H2	99	77.778	Loxodonta_africana
ENSGAGG00000025337	-	91	70.662	ENSMFAG00000036104	P3H2	88	70.662	Macaca_fascicularis
ENSGAGG00000025337	-	91	70.505	ENSMMUG00000000623	P3H2	88	70.505	Macaca_mulatta
ENSGAGG00000025337	-	91	70.662	ENSMNEG00000027261	P3H2	88	70.662	Macaca_nemestrina
ENSGAGG00000025337	-	76	63.238	ENSMAMG00000006370	p3h2	100	63.238	Mastacembelus_armatus
ENSGAGG00000025337	-	80	61.202	ENSMZEG00005003110	p3h2	80	62.113	Maylandia_zebra
ENSGAGG00000025337	-	79	82.450	ENSMGAG00000007491	P3H2	100	82.450	Meleagris_gallopavo
ENSGAGG00000025337	-	91	70.189	ENSMAUG00000004803	P3h2	95	76.703	Mesocricetus_auratus
ENSGAGG00000025337	-	91	70.978	ENSMICG00000049208	P3H2	89	70.978	Microcebus_murinus
ENSGAGG00000025337	-	91	70.189	ENSMOCG00000008061	P3h2	93	78.040	Microtus_ochrogaster
ENSGAGG00000025337	-	81	61.744	ENSMMOG00000019576	p3h2	82	61.744	Mola_mola
ENSGAGG00000025337	-	80	63.504	ENSMODG00000015073	P3H2	77	64.234	Monodelphis_domestica
ENSGAGG00000025337	-	79	62.842	ENSMALG00000017825	p3h2	80	62.842	Monopterus_albus
ENSGAGG00000025337	-	91	69.510	MGP_CAROLIEiJ_G0020626	P3h2	88	69.510	Mus_caroli
ENSGAGG00000025337	-	91	69.874	ENSMUSG00000038168	P3h2	88	69.874	Mus_musculus
ENSGAGG00000025337	-	91	69.984	MGP_PahariEiJ_G0016331	P3h2	88	69.984	Mus_pahari
ENSGAGG00000025337	-	91	69.558	MGP_SPRETEiJ_G0021522	P3h2	88	69.558	Mus_spretus
ENSGAGG00000025337	-	78	91.667	ENSMPUG00000003446	P3H2	89	91.667	Mustela_putorius_furo
ENSGAGG00000025337	-	79	77.818	ENSMLUG00000015613	P3H2	100	77.818	Myotis_lucifugus
ENSGAGG00000025337	-	79	78.285	ENSNGAG00000000626	P3h2	92	78.285	Nannospalax_galili
ENSGAGG00000025337	-	80	61.905	ENSNBRG00000016641	p3h2	80	61.905	Neolamprologus_brichardi
ENSGAGG00000025337	-	76	78.937	ENSNLEG00000006734	-	100	78.937	Nomascus_leucogenys
ENSGAGG00000025337	-	91	70.505	ENSOPRG00000014074	P3H2	88	70.505	Ochotona_princeps
ENSGAGG00000025337	-	79	62.842	ENSONIG00000001714	p3h2	80	62.842	Oreochromis_niloticus
ENSGAGG00000025337	-	72	82.565	ENSOANG00000013797	P3H2	99	82.565	Ornithorhynchus_anatinus
ENSGAGG00000025337	-	91	71.136	ENSOCUG00000011014	P3H2	88	71.136	Oryctolagus_cuniculus
ENSGAGG00000025337	-	80	60.291	ENSORLG00000005641	p3h2	80	61.202	Oryzias_latipes
ENSGAGG00000025337	-	73	61.233	ENSORLG00020021674	p3h2	77	61.233	Oryzias_latipes_hni
ENSGAGG00000025337	-	80	60.838	ENSORLG00015019012	p3h2	80	61.749	Oryzias_latipes_hsok
ENSGAGG00000025337	-	80	61.384	ENSOMEG00000013713	p3h2	79	62.295	Oryzias_melastigma
ENSGAGG00000025337	-	79	78.766	ENSOGAG00000003842	P3H2	100	78.766	Otolemur_garnettii
ENSGAGG00000025337	-	92	71.139	ENSOARG00000020475	P3H2	89	71.139	Ovis_aries
ENSGAGG00000025337	-	86	74.707	ENSPPAG00000040013	P3H2	92	75.084	Pan_paniscus
ENSGAGG00000025337	-	92	71.429	ENSPPRG00000014656	P3H2	88	71.429	Panthera_pardus
ENSGAGG00000025337	-	86	75.712	ENSPTIG00000016608	P3H2	83	75.712	Panthera_tigris_altaica
ENSGAGG00000025337	-	86	74.707	ENSPTRG00000015736	P3H2	93	78.584	Pan_troglodytes
ENSGAGG00000025337	-	91	70.820	ENSPANG00000005379	P3H2	88	70.820	Papio_anubis
ENSGAGG00000025337	-	79	63.388	ENSPMGG00000012834	p3h2	80	63.388	Periophthalmus_magnuspinnatus
ENSGAGG00000025337	-	91	70.347	ENSPEMG00000016547	P3h2	89	70.347	Peromyscus_maniculatus_bairdii
ENSGAGG00000025337	-	79	64.117	ENSPFOG00000014376	p3h2	80	64.117	Poecilia_formosa
ENSGAGG00000025337	-	79	63.934	ENSPLAG00000012556	p3h2	80	63.934	Poecilia_latipinna
ENSGAGG00000025337	-	79	63.752	ENSPMEG00000010685	p3h2	78	63.752	Poecilia_mexicana
ENSGAGG00000025337	-	79	60.474	ENSPREG00000015431	p3h2	79	60.474	Poecilia_reticulata
ENSGAGG00000025337	-	92	70.958	ENSPVAG00000009057	P3H2	88	70.958	Pteropus_vampyrus
ENSGAGG00000025337	-	80	61.202	ENSPNYG00000005890	p3h2	80	62.113	Pundamilia_nyererei
ENSGAGG00000025337	-	70	76.404	ENSPNAG00000029093	p3h2	75	76.404	Pygocentrus_nattereri
ENSGAGG00000025337	-	91	69.716	ENSRNOG00000055751	P3h2	88	69.716	Rattus_norvegicus
ENSGAGG00000025337	-	91	70.505	ENSRBIG00000018185	P3H2	88	70.505	Rhinopithecus_bieti
ENSGAGG00000025337	-	91	70.505	ENSRROG00000031164	P3H2	88	70.505	Rhinopithecus_roxellana
ENSGAGG00000025337	-	89	69.502	ENSSBOG00000035056	P3H2	96	73.064	Saimiri_boliviensis_boliviensis
ENSGAGG00000025337	-	80	62.088	ENSSHAG00000006714	-	100	63.004	Sarcophilus_harrisii
ENSGAGG00000025337	-	79	65.392	ENSSFOG00015006816	p3h2	79	65.392	Scleropages_formosus
ENSGAGG00000025337	-	79	63.388	ENSSMAG00000003284	p3h2	78	63.388	Scophthalmus_maximus
ENSGAGG00000025337	-	79	63.752	ENSSDUG00000002767	p3h2	80	63.752	Seriola_dumerili
ENSGAGG00000025337	-	79	63.752	ENSSLDG00000017365	p3h2	80	63.752	Seriola_lalandi_dorsalis
ENSGAGG00000025337	-	80	70.696	ENSSPUG00000010809	P3H2	97	71.245	Sphenodon_punctatus
ENSGAGG00000025337	-	79	62.659	ENSSPAG00000021635	p3h2	80	62.659	Stegastes_partitus
ENSGAGG00000025337	-	92	70.487	ENSSSCG00000011813	P3H2	89	70.487	Sus_scrofa
ENSGAGG00000025337	-	79	82.633	ENSTGUG00000009345	P3H2	99	82.633	Taeniopygia_guttata
ENSGAGG00000025337	-	79	63.388	ENSTRUG00000017655	p3h2	80	63.388	Takifugu_rubripes
ENSGAGG00000025337	-	79	62.842	ENSTNIG00000015540	p3h2	100	62.842	Tetraodon_nigroviridis
ENSGAGG00000025337	-	92	57.614	ENSTBEG00000004997	P3H2	88	57.614	Tupaia_belangeri
ENSGAGG00000025337	-	92	69.231	ENSTTRG00000001893	P3H2	96	69.231	Tursiops_truncatus
ENSGAGG00000025337	-	80	75.000	ENSUAMG00000006549	P3H2	98	75.139	Ursus_americanus
ENSGAGG00000025337	-	79	79.197	ENSUMAG00000003698	P3H2	97	79.406	Ursus_maritimus
ENSGAGG00000025337	-	81	70.035	ENSVPAG00000012351	P3H2	99	70.035	Vicugna_pacos
ENSGAGG00000025337	-	99	67.151	ENSVVUG00000013454	P3H2	94	75.421	Vulpes_vulpes
ENSGAGG00000025337	-	80	71.220	ENSXETG00000012845	p3h2	99	72.131	Xenopus_tropicalis
ENSGAGG00000025337	-	80	62.364	ENSXCOG00000002798	p3h2	81	62.364	Xiphophorus_couchianus
ENSGAGG00000025337	-	79	63.388	ENSXMAG00000018362	p3h2	80	63.388	Xiphophorus_maculatus