EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000025400 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: NMT55|NRB54|P54|P54NRB|PPP1R114
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 50256 bases
Position: chrPPEB01000457.1:395828-446083
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000035789	RRM_1	PF00076.22	1.5e-31	1	2
ENSGAGP00000035789	RRM_1	PF00076.22	1.5e-31	2	2
ENSGAGP00000035791	RRM_1	PF00076.22	1.7e-31	1	2
ENSGAGP00000035791	RRM_1	PF00076.22	1.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000040520	-	2606	-	ENSGAGP00000035791	509 (aa)	-	-
ENSGAGT00000040518	-	1817	-	ENSGAGP00000035789	495 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000025400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000025400's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000025400	-	83	61.263	ENSGAGG00000019164	PSPC1	56	74.658

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000025400	-	91	86.681	ENSG00000147140	NONO	99	96.098	Homo_sapiens
ENSGAGG00000025400	-	91	64.135	ENSAPOG00000023320	nono	100	63.812	Acanthochromis_polyacanthus
ENSGAGG00000025400	-	91	86.864	ENSAMEG00000016057	NONO	100	87.288	Ailuropoda_melanoleuca
ENSGAGG00000025400	-	91	65.812	ENSACIG00000019987	nono	100	65.885	Amphilophus_citrinellus
ENSGAGG00000025400	-	91	64.240	ENSAOCG00000018863	nono	100	63.169	Amphiprion_ocellaris
ENSGAGG00000025400	-	74	73.352	ENSAPEG00000011383	nono	81	77.439	Amphiprion_percula
ENSGAGG00000025400	-	83	96.919	ENSAPLG00000002642	NONO	98	96.919	Anas_platyrhynchos
ENSGAGG00000025400	-	91	88.723	ENSACAG00000015026	NONO	100	88.723	Anolis_carolinensis
ENSGAGG00000025400	-	90	60.652	ENSANAG00000035751	-	96	83.117	Aotus_nancymaae
ENSGAGG00000025400	-	91	86.681	ENSANAG00000033266	-	100	87.104	Aotus_nancymaae
ENSGAGG00000025400	-	91	71.983	ENSANAG00000027089	-	99	70.690	Aotus_nancymaae
ENSGAGG00000025400	-	74	74.731	ENSACLG00000012045	nono	98	74.731	Astatotilapia_calliptera
ENSGAGG00000025400	-	91	64.509	ENSAMXG00000033933	nono	100	64.421	Astyanax_mexicanus
ENSGAGG00000025400	-	91	86.653	ENSBTAG00000012152	NONO	100	87.076	Bos_taurus
ENSGAGG00000025400	-	91	86.681	ENSCJAG00000036744	NONO	96	97.386	Callithrix_jacchus
ENSGAGG00000025400	-	77	82.353	ENSCAFG00000013766	-	100	83.137	Canis_familiaris
ENSGAGG00000025400	-	91	85.593	ENSCAFG00000003207	-	100	86.017	Canis_familiaris
ENSGAGG00000025400	-	84	77.518	ENSCAFG00000030809	-	99	77.752	Canis_familiaris
ENSGAGG00000025400	-	91	86.864	ENSCAFG00000017071	NONO	100	87.288	Canis_familiaris
ENSGAGG00000025400	-	91	85.169	ENSCAFG00020020298	-	100	85.593	Canis_lupus_dingo
ENSGAGG00000025400	-	73	79.625	ENSCHIG00000009602	-	90	79.625	Capra_hircus
ENSGAGG00000025400	-	91	86.653	ENSCHIG00000000365	-	100	87.076	Capra_hircus
ENSGAGG00000025400	-	91	84.599	ENSTSYG00000007423	-	100	85.021	Carlito_syrichta
ENSGAGG00000025400	-	90	76.907	ENSTSYG00000036306	-	100	77.754	Carlito_syrichta
ENSGAGG00000025400	-	91	71.097	ENSTSYG00000034207	-	100	73.629	Carlito_syrichta
ENSGAGG00000025400	-	70	73.109	ENSCAPG00000006522	-	84	73.109	Cavia_aperea
ENSGAGG00000025400	-	91	64.392	ENSCAPG00000002723	-	100	64.392	Cavia_aperea
ENSGAGG00000025400	-	91	81.405	ENSCAPG00000011616	-	100	82.231	Cavia_aperea
ENSGAGG00000025400	-	90	63.539	ENSCAPG00000002354	-	97	62.900	Cavia_aperea
ENSGAGG00000025400	-	91	81.520	ENSCPOG00000023605	-	100	81.520	Cavia_porcellus
ENSGAGG00000025400	-	75	85.602	ENSCPOG00000036719	-	93	86.772	Cavia_porcellus
ENSGAGG00000025400	-	91	63.502	ENSCPOG00000026604	-	99	62.869	Cavia_porcellus
ENSGAGG00000025400	-	91	78.602	ENSCPOG00000038668	-	100	78.602	Cavia_porcellus
ENSGAGG00000025400	-	91	84.298	ENSCPOG00000010263	-	100	84.711	Cavia_porcellus
ENSGAGG00000025400	-	91	78.224	ENSCATG00000039509	NONO	100	78.647	Cercocebus_atys
ENSGAGG00000025400	-	91	85.924	ENSCLAG00000003642	NONO	100	86.345	Chinchilla_lanigera
ENSGAGG00000025400	-	91	97.660	ENSCPBG00000016659	NONO	100	97.660	Chrysemys_picta_bellii
ENSGAGG00000025400	-	91	86.681	ENSCANG00000025310	NONO	93	96.364	Colobus_angolensis_palliatus
ENSGAGG00000025400	-	91	86.498	ENSCGRG00001000065	Nono	100	86.920	Cricetulus_griseus_chok1gshd
ENSGAGG00000025400	-	83	90.261	ENSCGRG00000004508	Nono	100	90.261	Cricetulus_griseus_crigri
ENSGAGG00000025400	-	91	63.675	ENSCSEG00000010708	nono	96	64.026	Cynoglossus_semilaevis
ENSGAGG00000025400	-	90	63.462	ENSCSEG00000008189	NONO	93	67.130	Cynoglossus_semilaevis
ENSGAGG00000025400	-	84	66.432	ENSCVAG00000003978	nono	100	62.661	Cyprinodon_variegatus
ENSGAGG00000025400	-	91	62.633	ENSDARG00000020482	nono	100	68.966	Danio_rerio
ENSGAGG00000025400	-	60	69.799	ENSDNOG00000032215	-	100	69.799	Dasypus_novemcinctus
ENSGAGG00000025400	-	91	87.393	ENSDORG00000009294	Nono	100	87.607	Dipodomys_ordii
ENSGAGG00000025400	-	78	88.235	ENSETEG00000013823	NONO	86	88.235	Echinops_telfairi
ENSGAGG00000025400	-	91	86.864	ENSECAG00000008502	NONO	100	87.288	Equus_caballus
ENSGAGG00000025400	-	91	87.021	ENSEEUG00000014404	NONO	100	87.447	Erinaceus_europaeus
ENSGAGG00000025400	-	91	65.895	ENSELUG00000001083	nono	100	65.310	Esox_lucius
ENSGAGG00000025400	-	91	86.864	ENSFCAG00000043511	-	100	87.288	Felis_catus
ENSGAGG00000025400	-	91	86.551	ENSFALG00000011765	NONO	100	86.985	Ficedula_albicollis
ENSGAGG00000025400	-	91	70.084	ENSFDAG00000006143	-	100	69.456	Fukomys_damarensis
ENSGAGG00000025400	-	91	86.653	ENSFDAG00000012809	-	100	87.076	Fukomys_damarensis
ENSGAGG00000025400	-	78	68.718	ENSFHEG00000009714	nono	86	70.430	Fundulus_heteroclitus
ENSGAGG00000025400	-	91	94.503	ENSGALG00000005507	NONO	100	94.503	Gallus_gallus
ENSGAGG00000025400	-	91	62.527	ENSGAFG00000011460	nono	100	62.955	Gambusia_affinis
ENSGAGG00000025400	-	91	64.668	ENSGACG00000011824	nono	100	64.026	Gasterosteus_aculeatus
ENSGAGG00000025400	-	91	77.186	ENSGGOG00000036327	-	100	77.399	Gorilla_gorilla
ENSGAGG00000025400	-	84	88.605	ENSGGOG00000006194	NONO	97	89.070	Gorilla_gorilla
ENSGAGG00000025400	-	91	65.812	ENSHBUG00000010741	nono	100	66.098	Haplochromis_burtoni
ENSGAGG00000025400	-	91	86.892	ENSHGLG00000005550	NONO	100	86.892	Heterocephalus_glaber_female
ENSGAGG00000025400	-	91	86.892	ENSHGLG00100013511	NONO	100	86.892	Heterocephalus_glaber_male
ENSGAGG00000025400	-	91	65.021	ENSHCOG00000016441	nono	100	64.026	Hippocampus_comes
ENSGAGG00000025400	-	81	70.343	ENSIPUG00000018271	nono	78	73.874	Ictalurus_punctatus
ENSGAGG00000025400	-	91	86.864	ENSSTOG00000015869	NONO	100	87.288	Ictidomys_tridecemlineatus
ENSGAGG00000025400	-	91	68.936	ENSJJAG00000001971	-	100	68.298	Jaculus_jaculus
ENSGAGG00000025400	-	91	86.017	ENSJJAG00000017151	-	100	86.441	Jaculus_jaculus
ENSGAGG00000025400	-	82	66.190	ENSKMAG00000002798	nono	100	61.538	Kryptolebias_marmoratus
ENSGAGG00000025400	-	85	67.426	ENSLBEG00000022623	nono	85	73.514	Labrus_bergylta
ENSGAGG00000025400	-	74	78.756	ENSLACG00000000598	NONO	91	78.756	Latimeria_chalumnae
ENSGAGG00000025400	-	91	69.639	ENSLOCG00000014739	nono	100	67.857	Lepisosteus_oculatus
ENSGAGG00000025400	-	91	88.286	ENSLAFG00000013422	NONO	100	88.069	Loxodonta_africana
ENSGAGG00000025400	-	91	86.681	ENSMFAG00000041557	NONO	100	92.982	Macaca_fascicularis
ENSGAGG00000025400	-	75	89.323	ENSMMUG00000020481	NONO	100	89.323	Macaca_mulatta
ENSGAGG00000025400	-	91	86.681	ENSMNEG00000009698	NONO	100	87.104	Macaca_nemestrina
ENSGAGG00000025400	-	91	86.681	ENSMLEG00000042452	NONO	100	87.104	Mandrillus_leucophaeus
ENSGAGG00000025400	-	91	65.739	ENSMAMG00000007314	nono	100	65.739	Mastacembelus_armatus
ENSGAGG00000025400	-	74	74.731	ENSMZEG00005010199	nono	98	74.731	Maylandia_zebra
ENSGAGG00000025400	-	83	96.919	ENSMGAG00000008869	NONO	98	96.919	Meleagris_gallopavo
ENSGAGG00000025400	-	91	86.134	ENSMAUG00000016243	Nono	100	86.134	Mesocricetus_auratus
ENSGAGG00000025400	-	91	86.653	ENSMICG00000000232	NONO	100	87.076	Microcebus_murinus
ENSGAGG00000025400	-	85	90.115	ENSMOCG00000005532	-	96	90.115	Microtus_ochrogaster
ENSGAGG00000025400	-	91	74.620	ENSMOCG00000020099	-	95	73.102	Microtus_ochrogaster
ENSGAGG00000025400	-	91	73.617	ENSMOCG00000021293	-	100	76.170	Microtus_ochrogaster
ENSGAGG00000025400	-	90	64.224	ENSMMOG00000015503	nono	90	63.853	Mola_mola
ENSGAGG00000025400	-	86	93.593	ENSMODG00000004445	NONO	99	93.793	Monodelphis_domestica
ENSGAGG00000025400	-	81	69.059	ENSMALG00000001310	nono	88	71.774	Monopterus_albus
ENSGAGG00000025400	-	91	86.526	ENSMUSG00000031311	Nono	100	86.526	Mus_musculus
ENSGAGG00000025400	-	91	86.164	MGP_PahariEiJ_G0031826	Nono	100	86.164	Mus_pahari
ENSGAGG00000025400	-	91	86.864	ENSMPUG00000004937	NONO	100	87.288	Mustela_putorius_furo
ENSGAGG00000025400	-	94	85.481	ENSMLUG00000002489	NONO	93	85.685	Myotis_lucifugus
ENSGAGG00000025400	-	91	86.325	ENSNGAG00000010857	Nono	100	87.179	Nannospalax_galili
ENSGAGG00000025400	-	91	66.239	ENSNBRG00000017083	nono	100	66.311	Neolamprologus_brichardi
ENSGAGG00000025400	-	91	84.810	ENSNLEG00000001278	NONO	100	89.323	Nomascus_leucogenys
ENSGAGG00000025400	-	91	83.298	ENSMEUG00000004294	NONO	100	83.721	Notamacropus_eugenii
ENSGAGG00000025400	-	55	100.000	ENSOPRG00000001139	-	69	100.000	Ochotona_princeps
ENSGAGG00000025400	-	91	63.774	ENSODEG00000011878	-	100	63.226	Octodon_degus
ENSGAGG00000025400	-	91	78.858	ENSODEG00000002994	-	100	79.281	Octodon_degus
ENSGAGG00000025400	-	88	59.565	ENSODEG00000004982	-	78	66.570	Octodon_degus
ENSGAGG00000025400	-	84	59.207	ENSODEG00000000530	-	90	59.310	Octodon_degus
ENSGAGG00000025400	-	91	82.553	ENSODEG00000002224	-	100	82.340	Octodon_degus
ENSGAGG00000025400	-	91	65.812	ENSONIG00000020497	nono	100	66.098	Oreochromis_niloticus
ENSGAGG00000025400	-	90	54.486	ENSOCUG00000024801	-	97	52.954	Oryctolagus_cuniculus
ENSGAGG00000025400	-	87	87.640	ENSOCUG00000021848	-	92	88.356	Oryctolagus_cuniculus
ENSGAGG00000025400	-	91	63.597	ENSORLG00000012801	nono	84	71.237	Oryzias_latipes
ENSGAGG00000025400	-	70	75.434	ENSORLG00020003761	nono	75	76.829	Oryzias_latipes_hni
ENSGAGG00000025400	-	91	63.158	ENSORLG00015018033	nono	84	71.237	Oryzias_latipes_hsok
ENSGAGG00000025400	-	91	62.316	ENSOMEG00000012702	nono	84	71.774	Oryzias_melastigma
ENSGAGG00000025400	-	99	80.571	ENSOGAG00000004834	NONO	100	85.805	Otolemur_garnettii
ENSGAGG00000025400	-	91	86.469	ENSOARG00000016966	NONO	100	86.892	Ovis_aries
ENSGAGG00000025400	-	91	86.681	ENSPPAG00000032487	NONO	100	87.104	Pan_paniscus
ENSGAGG00000025400	-	91	78.678	ENSPPAG00000041394	-	100	79.104	Pan_paniscus
ENSGAGG00000025400	-	91	86.864	ENSPPRG00000024537	-	100	87.288	Panthera_pardus
ENSGAGG00000025400	-	91	86.653	ENSPTIG00000016068	-	100	87.076	Panthera_tigris_altaica
ENSGAGG00000025400	-	91	78.419	ENSPTRG00000051228	-	100	78.846	Pan_troglodytes
ENSGAGG00000025400	-	91	86.681	ENSPTRG00000022010	NONO	100	87.104	Pan_troglodytes
ENSGAGG00000025400	-	91	61.237	ENSPANG00000035017	-	100	61.031	Papio_anubis
ENSGAGG00000025400	-	91	86.681	ENSPANG00000013979	NONO	100	87.104	Papio_anubis
ENSGAGG00000025400	-	91	60.300	ENSPKIG00000019475	-	91	78.090	Paramormyrops_kingsleyae
ENSGAGG00000025400	-	91	67.094	ENSPKIG00000014500	nono	100	66.667	Paramormyrops_kingsleyae
ENSGAGG00000025400	-	91	98.268	ENSPSIG00000010678	NONO	100	98.268	Pelodiscus_sinensis
ENSGAGG00000025400	-	85	66.667	ENSPMGG00000023030	nono	93	63.371	Periophthalmus_magnuspinnatus
ENSGAGG00000025400	-	91	86.076	ENSPEMG00000011150	Nono	100	86.498	Peromyscus_maniculatus_bairdii
ENSGAGG00000025400	-	91	86.611	ENSPCIG00000026515	NONO	100	86.820	Phascolarctos_cinereus
ENSGAGG00000025400	-	78	64.962	ENSPFOG00000016436	nono	100	58.974	Poecilia_formosa
ENSGAGG00000025400	-	76	70.079	ENSPLAG00000017492	nono	98	63.319	Poecilia_latipinna
ENSGAGG00000025400	-	72	72.853	ENSPMEG00000021530	nono	78	75.146	Poecilia_mexicana
ENSGAGG00000025400	-	78	69.643	ENSPREG00000010014	nono	100	63.034	Poecilia_reticulata
ENSGAGG00000025400	-	91	86.681	ENSPPYG00000020451	NONO	100	87.104	Pongo_abelii
ENSGAGG00000025400	-	91	85.535	ENSPCAG00000002541	NONO	100	86.164	Procavia_capensis
ENSGAGG00000025400	-	91	86.864	ENSPCOG00000008197	NONO	100	87.288	Propithecus_coquereli
ENSGAGG00000025400	-	91	86.653	ENSPVAG00000016503	NONO	100	87.076	Pteropus_vampyrus
ENSGAGG00000025400	-	91	64.361	ENSPNAG00000008232	nono	89	62.055	Pygocentrus_nattereri
ENSGAGG00000025400	-	91	86.192	ENSRNOG00000003689	Nono	100	86.192	Rattus_norvegicus
ENSGAGG00000025400	-	72	88.859	ENSRBIG00000037966	NONO	100	88.859	Rhinopithecus_bieti
ENSGAGG00000025400	-	91	86.469	ENSRROG00000043203	NONO	100	86.892	Rhinopithecus_roxellana
ENSGAGG00000025400	-	91	69.296	ENSSBOG00000018932	-	97	73.944	Saimiri_boliviensis_boliviensis
ENSGAGG00000025400	-	91	83.122	ENSSBOG00000027683	-	100	83.544	Saimiri_boliviensis_boliviensis
ENSGAGG00000025400	-	91	86.469	ENSSBOG00000032772	-	100	86.892	Saimiri_boliviensis_boliviensis
ENSGAGG00000025400	-	91	89.331	ENSSHAG00000010195	NONO	100	89.749	Sarcophilus_harrisii
ENSGAGG00000025400	-	91	67.161	ENSSFOG00015008964	nono	90	80.615	Scleropages_formosus
ENSGAGG00000025400	-	91	60.897	ENSSFOG00015000137	-	76	77.083	Scleropages_formosus
ENSGAGG00000025400	-	91	64.882	ENSSDUG00000021886	nono	100	64.454	Seriola_dumerili
ENSGAGG00000025400	-	91	64.882	ENSSLDG00000012392	nono	100	64.454	Seriola_lalandi_dorsalis
ENSGAGG00000025400	-	91	81.277	ENSSARG00000007959	NONO	100	73.307	Sorex_araneus
ENSGAGG00000025400	-	75	95.833	ENSSPUG00000003116	NONO	100	95.833	Sphenodon_punctatus
ENSGAGG00000025400	-	91	64.882	ENSSPAG00000012663	nono	100	64.668	Stegastes_partitus
ENSGAGG00000025400	-	91	86.864	ENSSSCG00000023245	NONO	100	87.288	Sus_scrofa
ENSGAGG00000025400	-	91	96.753	ENSTGUG00000007048	NONO	100	96.753	Taeniopygia_guttata
ENSGAGG00000025400	-	91	63.789	ENSTRUG00000005554	nono	100	63.966	Takifugu_rubripes
ENSGAGG00000025400	-	91	86.864	ENSTTRG00000009605	NONO	100	87.288	Tursiops_truncatus
ENSGAGG00000025400	-	91	85.169	ENSUAMG00000008220	NONO	100	85.593	Ursus_americanus
ENSGAGG00000025400	-	91	86.864	ENSUMAG00000021550	NONO	100	87.288	Ursus_maritimus
ENSGAGG00000025400	-	91	86.864	ENSVPAG00000002272	NONO	100	87.288	Vicugna_pacos
ENSGAGG00000025400	-	91	83.579	ENSVVUG00000003390	-	100	84.000	Vulpes_vulpes
ENSGAGG00000025400	-	91	78.936	ENSXETG00000020868	nono	100	78.936	Xenopus_tropicalis
ENSGAGG00000025400	-	91	63.169	ENSXCOG00000015587	nono	100	63.597	Xiphophorus_couchianus
ENSGAGG00000025400	-	78	70.844	ENSXMAG00000019883	nono	100	63.675	Xiphophorus_maculatus