EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGAGG00000025583 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Gopherus_agassizii
Status
putative
Strand
Plus strand
Length
32995 bases
Position
chrPPEB01002120.1:1168-34162
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAGP00000036093CPSF73-100_CPF11718.82.4e-5511
ENSGAGP00000036093Beta-CaspPF10996.83.2e-3411
ENSGAGP00000036093RMMBLPF07521.121.2e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAGT00000040859CPSF3-2011512-ENSGAGP00000036093503 (aa)--
Gene Model
Click here to download ENSGAGG00000025583's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000025583's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAGG00000025583CPSF39393.362ENSG00000119203CPSF37293.362Homo_sapiens
ENSGAGG00000025583CPSF39380.300ENSAPOG00000022087cpsf37179.452Acanthochromis_polyacanthus
ENSGAGG00000025583CPSF35795.819ENSAPOG00000012241CPSF35595.502Acanthochromis_polyacanthus
ENSGAGG00000025583CPSF39394.218ENSAMEG00000008493CPSF36894.218Ailuropoda_melanoleuca
ENSGAGG00000025583CPSF39384.582ENSACIG00000023663CPSF37384.582Amphilophus_citrinellus
ENSGAGG00000025583CPSF39379.229ENSACIG00000009846cpsf37379.229Amphilophus_citrinellus
ENSGAGG00000025583CPSF39380.514ENSAOCG00000022056cpsf36780.514Amphiprion_ocellaris
ENSGAGG00000025583CPSF39383.298ENSAOCG00000010077CPSF37281.370Amphiprion_ocellaris
ENSGAGG00000025583CPSF39380.728ENSAPEG00000019526cpsf37379.657Amphiprion_percula
ENSGAGG00000025583CPSF39383.298ENSAPEG00000021167CPSF37381.370Amphiprion_percula
ENSGAGG00000025583CPSF39376.660ENSATEG00000014525CPSF36676.660Anabas_testudineus
ENSGAGG00000025583CPSF39380.728ENSATEG00000003959cpsf37380.514Anabas_testudineus
ENSGAGG00000025583CPSF39396.574ENSAPLG00000006941CPSF36896.574Anas_platyrhynchos
ENSGAGG00000025583CPSF39391.239ENSACAG00000001759CPSF37491.239Anolis_carolinensis
ENSGAGG00000025583CPSF39384.797ENSANAG00000031254CPSF36884.797Aotus_nancymaae
ENSGAGG00000025583CPSF39384.154ENSACLG00000018846CPSF37384.154Astatotilapia_calliptera
ENSGAGG00000025583CPSF39381.370ENSACLG00000014484cpsf37380.942Astatotilapia_calliptera
ENSGAGG00000025583CPSF39384.368ENSAMXG00000004786cpsf37382.013Astyanax_mexicanus
ENSGAGG00000025583CPSF39394.004ENSBTAG00000019735CPSF36894.004Bos_taurus
ENSGAGG00000025583CPSF38453.864WBGene00013460cpsf-36253.864Caenorhabditis_elegans
ENSGAGG00000025583CPSF39393.576ENSCJAG00000006276CPSF36993.576Callithrix_jacchus
ENSGAGG00000025583CPSF39394.218ENSCAFG00000003375CPSF36594.218Canis_familiaris
ENSGAGG00000025583CPSF38096.040ENSCAFG00020026799CPSF36596.040Canis_lupus_dingo
ENSGAGG00000025583CPSF39394.004ENSCHIG00000013973CPSF36894.004Capra_hircus
ENSGAGG00000025583CPSF39393.362ENSTSYG00000002967CPSF36893.362Carlito_syrichta
ENSGAGG00000025583CPSF39391.863ENSCAPG00000013851CPSF37091.863Cavia_aperea
ENSGAGG00000025583CPSF39391.863ENSCPOG00000011299CPSF36891.863Cavia_porcellus
ENSGAGG00000025583CPSF39393.362ENSCCAG00000036730CPSF36993.362Cebus_capucinus
ENSGAGG00000025583CPSF39389.957ENSCATG00000014770CPSF36398.361Cercocebus_atys
ENSGAGG00000025583CPSF39392.077ENSCLAG00000002727CPSF36892.077Chinchilla_lanigera
ENSGAGG00000025583CPSF39382.013ENSCSAG00000007125CPSF36682.013Chlorocebus_sabaeus
ENSGAGG00000025583CPSF39362.955ENSCHOG00000000180CPSF37062.955Choloepus_hoffmanni
ENSGAGG00000025583CPSF39399.143ENSCPBG00000014074CPSF36899.143Chrysemys_picta_bellii
ENSGAGG00000025583CPSF39463.368ENSCING00000007214-6863.368Ciona_intestinalis
ENSGAGG00000025583CPSF38584.368ENSCANG00000034435CPSF36584.368Colobus_angolensis_palliatus
ENSGAGG00000025583CPSF39393.148ENSCGRG00001013134Cpsf36893.148Cricetulus_griseus_chok1gshd
ENSGAGG00000025583CPSF39393.148ENSCGRG00000018319Cpsf36893.148Cricetulus_griseus_crigri
ENSGAGG00000025583CPSF39382.051ENSCSEG00000002021CPSF37282.051Cynoglossus_semilaevis
ENSGAGG00000025583CPSF36370.533ENSCVAG00000022039-9470.533Cyprinodon_variegatus
ENSGAGG00000025583CPSF39383.726ENSCVAG00000015067CPSF36883.726Cyprinodon_variegatus
ENSGAGG00000025583CPSF39384.582ENSDARG00000027649cpsf36884.582Danio_rerio
ENSGAGG00000025583CPSF39392.735ENSDNOG00000008940CPSF36592.735Dasypus_novemcinctus
ENSGAGG00000025583CPSF38794.495ENSDORG00000014263Cpsf36794.495Dipodomys_ordii
ENSGAGG00000025583CPSF39260.385FBgn0261065Cpsf736760.385Drosophila_melanogaster
ENSGAGG00000025583CPSF38094.030ENSETEG00000003893CPSF36294.030Echinops_telfairi
ENSGAGG00000025583CPSF39374.074ENSEBUG00000009018cpsf36973.975Eptatretus_burgeri
ENSGAGG00000025583CPSF39394.218ENSEASG00005003970CPSF36894.218Equus_asinus_asinus
ENSGAGG00000025583CPSF39394.218ENSECAG00000019911CPSF36894.218Equus_caballus
ENSGAGG00000025583CPSF39382.655ENSEEUG00000015422CPSF36882.655Erinaceus_europaeus
ENSGAGG00000025583CPSF39384.368ENSELUG00000013775cpsf37384.154Esox_lucius
ENSGAGG00000025583CPSF39394.004ENSFCAG00000007852CPSF37294.004Felis_catus
ENSGAGG00000025583CPSF39396.146ENSFALG00000006572CPSF37296.146Ficedula_albicollis
ENSGAGG00000025583CPSF39391.684ENSFDAG00000006317CPSF36891.684Fukomys_damarensis
ENSGAGG00000025583CPSF39379.229ENSFHEG00000014774cpsf36779.229Fundulus_heteroclitus
ENSGAGG00000025583CPSF38068.704ENSFHEG00000012186CPSF39968.704Fundulus_heteroclitus
ENSGAGG00000025583CPSF39381.585ENSGMOG00000003157cpsf36781.585Gadus_morhua
ENSGAGG00000025583CPSF39394.861ENSGALG00000016424CPSF37394.861Gallus_gallus
ENSGAGG00000025583CPSF39379.443ENSGAFG00000019449cpsf37379.443Gambusia_affinis
ENSGAGG00000025583CPSF39384.154ENSGAFG00000008016CPSF36884.154Gambusia_affinis
ENSGAGG00000025583CPSF39393.576ENSGGOG00000001757CPSF37493.576Gorilla_gorilla
ENSGAGG00000025583CPSF38079.950ENSHBUG00000014332CPSF39979.950Haplochromis_burtoni
ENSGAGG00000025583CPSF39381.370ENSHBUG00000001188cpsf37380.942Haplochromis_burtoni
ENSGAGG00000025583CPSF39391.435ENSHGLG00000000666CPSF36891.435Heterocephalus_glaber_female
ENSGAGG00000025583CPSF39391.435ENSHGLG00100007765CPSF36891.435Heterocephalus_glaber_male
ENSGAGG00000025583CPSF39379.744ENSHCOG00000007251cpsf36879.744Hippocampus_comes
ENSGAGG00000025583CPSF39480.467ENSHCOG00000015957CPSF36780.467Hippocampus_comes
ENSGAGG00000025583CPSF39381.799ENSIPUG00000023488cpsf37379.872Ictalurus_punctatus
ENSGAGG00000025583CPSF39394.004ENSSTOG00000004476CPSF36894.004Ictidomys_tridecemlineatus
ENSGAGG00000025583CPSF39392.291ENSJJAG00000023415Cpsf36892.291Jaculus_jaculus
ENSGAGG00000025583CPSF39383.726ENSKMAG00000007317CPSF36883.726Kryptolebias_marmoratus
ENSGAGG00000025583CPSF39379.015ENSKMAG00000002806cpsf36779.015Kryptolebias_marmoratus
ENSGAGG00000025583CPSF39370.878ENSLBEG00000020569cpsf36270.878Labrus_bergylta
ENSGAGG00000025583CPSF38784.404ENSLBEG00000013492CPSF36684.404Labrus_bergylta
ENSGAGG00000025583CPSF37579.200ENSLBEG00000015018-9979.200Labrus_bergylta
ENSGAGG00000025583CPSF39376.660ENSLACG00000008308CPSF36776.660Latimeria_chalumnae
ENSGAGG00000025583CPSF39384.648ENSLOCG00000016823cpsf36884.648Lepisosteus_oculatus
ENSGAGG00000025583CPSF39394.433ENSLAFG00000009467CPSF36994.433Loxodonta_africana
ENSGAGG00000025583CPSF39393.362ENSMFAG00000001339CPSF37293.362Macaca_fascicularis
ENSGAGG00000025583CPSF39393.362ENSMMUG00000018038CPSF37293.362Macaca_mulatta
ENSGAGG00000025583CPSF39377.730ENSMNEG00000039447CPSF36577.730Macaca_nemestrina
ENSGAGG00000025583CPSF39393.576ENSMLEG00000026825CPSF36893.576Mandrillus_leucophaeus
ENSGAGG00000025583CPSF39382.516ENSMAMG00000008835CPSF37382.516Mastacembelus_armatus
ENSGAGG00000025583CPSF39380.942ENSMAMG00000003076cpsf36780.942Mastacembelus_armatus
ENSGAGG00000025583CPSF39381.370ENSMZEG00005014358cpsf37380.942Maylandia_zebra
ENSGAGG00000025583CPSF39384.154ENSMZEG00005006258CPSF37384.154Maylandia_zebra
ENSGAGG00000025583CPSF39394.647ENSMGAG00000013995CPSF37094.647Meleagris_gallopavo
ENSGAGG00000025583CPSF37490.374ENSMAUG00000000166Cpsf39990.374Mesocricetus_auratus
ENSGAGG00000025583CPSF39389.722ENSMICG00000002363CPSF37389.722Microcebus_murinus
ENSGAGG00000025583CPSF39387.152ENSMOCG00000020067Cpsf36787.152Microtus_ochrogaster
ENSGAGG00000025583CPSF36679.825ENSMMOG00000011923CPSF35679.825Mola_mola
ENSGAGG00000025583CPSF39376.017ENSMMOG00000018212CPSF37076.017Mola_mola
ENSGAGG00000025583CPSF39391.772ENSMODG00000014703CPSF36991.772Monodelphis_domestica
ENSGAGG00000025583CPSF39381.585ENSMALG00000016416cpsf37380.086Monopterus_albus
ENSGAGG00000025583CPSF39380.342ENSMALG00000011474CPSF37280.342Monopterus_albus
ENSGAGG00000025583CPSF39392.505MGP_CAROLIEiJ_G0017640Cpsf36892.505Mus_caroli
ENSGAGG00000025583CPSF39392.505ENSMUSG00000054309Cpsf36892.505Mus_musculus
ENSGAGG00000025583CPSF39392.291MGP_PahariEiJ_G0029397Cpsf36892.291Mus_pahari
ENSGAGG00000025583CPSF39392.505MGP_SPRETEiJ_G0018481Cpsf36892.505Mus_spretus
ENSGAGG00000025583CPSF39393.362ENSMPUG00000013213CPSF36893.362Mustela_putorius_furo
ENSGAGG00000025583CPSF39393.162ENSMLUG00000010636CPSF36893.162Myotis_lucifugus
ENSGAGG00000025583CPSF39392.934ENSNGAG00000019836Cpsf36892.934Nannospalax_galili
ENSGAGG00000025583CPSF39384.154ENSNBRG00000010525CPSF37384.154Neolamprologus_brichardi
ENSGAGG00000025583CPSF39380.942ENSNBRG00000004770cpsf37380.514Neolamprologus_brichardi
ENSGAGG00000025583CPSF39393.362ENSNLEG00000013359CPSF37293.362Nomascus_leucogenys
ENSGAGG00000025583CPSF39364.026ENSMEUG00000013117-6864.026Notamacropus_eugenii
ENSGAGG00000025583CPSF39381.156ENSOPRG00000008902CPSF36881.156Ochotona_princeps
ENSGAGG00000025583CPSF39392.505ENSODEG00000003129CPSF36892.505Octodon_degus
ENSGAGG00000025583CPSF39381.585ENSONIG00000018812cpsf36781.585Oreochromis_niloticus
ENSGAGG00000025583CPSF39394.004ENSOANG00000008577CPSF38394.004Ornithorhynchus_anatinus
ENSGAGG00000025583CPSF39394.004ENSOCUG00000003728CPSF36894.004Oryctolagus_cuniculus
ENSGAGG00000025583CPSF39378.587ENSORLG00000018854cpsf36778.587Oryzias_latipes
ENSGAGG00000025583CPSF39378.373ENSORLG00020013331cpsf37277.088Oryzias_latipes_hni
ENSGAGG00000025583CPSF39378.587ENSORLG00015011017cpsf37377.516Oryzias_latipes_hsok
ENSGAGG00000025583CPSF39379.015ENSOMEG00000010647cpsf36479.015Oryzias_melastigma
ENSGAGG00000025583CPSF39385.225ENSOGAG00000001680CPSF36985.225Otolemur_garnettii
ENSGAGG00000025583CPSF39394.004ENSOARG00000015073CPSF36894.004Ovis_aries
ENSGAGG00000025583CPSF39393.576ENSPPAG00000042457CPSF36893.576Pan_paniscus
ENSGAGG00000025583CPSF39393.576ENSPPRG00000016790CPSF37293.576Panthera_pardus
ENSGAGG00000025583CPSF39393.576ENSPTIG00000003920CPSF37493.576Panthera_tigris_altaica
ENSGAGG00000025583CPSF39393.576ENSPTRG00000011638CPSF36893.576Pan_troglodytes
ENSGAGG00000025583CPSF39393.362ENSPANG00000016798CPSF36893.362Papio_anubis
ENSGAGG00000025583CPSF39385.225ENSPKIG00000023646cpsf37385.225Paramormyrops_kingsleyae
ENSGAGG00000025583CPSF39398.073ENSPSIG00000016144CPSF36898.073Pelodiscus_sinensis
ENSGAGG00000025583CPSF38078.713ENSPMGG00000015311CPSF39978.713Periophthalmus_magnuspinnatus
ENSGAGG00000025583CPSF37687.632ENSPMGG00000006141-6687.632Periophthalmus_magnuspinnatus
ENSGAGG00000025583CPSF39392.505ENSPEMG00000017668Cpsf36892.505Peromyscus_maniculatus_bairdii
ENSGAGG00000025583CPSF36487.926ENSPMAG00000004841cpsf35987.926Petromyzon_marinus
ENSGAGG00000025583CPSF39393.148ENSPCIG00000009823CPSF36993.148Phascolarctos_cinereus
ENSGAGG00000025583CPSF39383.726ENSPFOG00000010418-6883.726Poecilia_formosa
ENSGAGG00000025583CPSF39379.443ENSPFOG00000015922cpsf36779.443Poecilia_formosa
ENSGAGG00000025583CPSF39379.443ENSPLAG00000000882cpsf36779.443Poecilia_latipinna
ENSGAGG00000025583CPSF38081.683ENSPLAG00000021300-9981.683Poecilia_latipinna
ENSGAGG00000025583CPSF39379.657ENSPMEG00000018309cpsf36779.657Poecilia_mexicana
ENSGAGG00000025583CPSF39376.445ENSPREG00000004482CPSF36676.445Poecilia_reticulata
ENSGAGG00000025583CPSF39379.657ENSPREG00000014875cpsf37379.657Poecilia_reticulata
ENSGAGG00000025583CPSF39386.938ENSPPYG00000012666CPSF36786.938Pongo_abelii
ENSGAGG00000025583CPSF38155.257ENSPCAG00000015042CPSF36355.257Procavia_capensis
ENSGAGG00000025583CPSF37674.448ENSPCOG00000023016CPSF36074.448Propithecus_coquereli
ENSGAGG00000025583CPSF39393.576ENSPVAG00000005324CPSF36893.576Pteropus_vampyrus
ENSGAGG00000025583CPSF39381.370ENSPNYG00000004405cpsf37380.942Pundamilia_nyererei
ENSGAGG00000025583CPSF37788.860ENSPNYG00000021047CPSF36488.860Pundamilia_nyererei
ENSGAGG00000025583CPSF39382.869ENSPNAG00000023060cpsf37382.869Pygocentrus_nattereri
ENSGAGG00000025583CPSF39392.505ENSRNOG00000052418Cpsf36892.505Rattus_norvegicus
ENSGAGG00000025583CPSF39387.366ENSRBIG00000041615CPSF37187.366Rhinopithecus_bieti
ENSGAGG00000025583CPSF39393.576ENSRROG00000033792CPSF36993.576Rhinopithecus_roxellana
ENSGAGG00000025583CPSF38736.295YLR277CYSH16836.484Saccharomyces_cerevisiae
ENSGAGG00000025583CPSF39387.049ENSSBOG00000027263CPSF36887.049Saimiri_boliviensis_boliviensis
ENSGAGG00000025583CPSF39393.362ENSSHAG00000007024CPSF36893.362Sarcophilus_harrisii
ENSGAGG00000025583CPSF39385.439ENSSFOG00015002108cpsf37485.439Scleropages_formosus
ENSGAGG00000025583CPSF38781.881ENSSMAG00000020534CPSF36481.881Scophthalmus_maximus
ENSGAGG00000025583CPSF39383.761ENSSDUG00000018498CPSF37383.761Seriola_dumerili
ENSGAGG00000025583CPSF39381.064ENSSDUG00000002828cpsf36681.064Seriola_dumerili
ENSGAGG00000025583CPSF39383.726ENSSLDG00000005234CPSF37383.726Seriola_lalandi_dorsalis
ENSGAGG00000025583CPSF39381.064ENSSLDG00000008469cpsf36681.064Seriola_lalandi_dorsalis
ENSGAGG00000025583CPSF39381.585ENSSARG00000005186CPSF36881.585Sorex_araneus
ENSGAGG00000025583CPSF39391.932ENSSPUG00000015525CPSF36891.932Sphenodon_punctatus
ENSGAGG00000025583CPSF39383.512ENSSPAG00000002906CPSF37383.512Stegastes_partitus
ENSGAGG00000025583CPSF39380.728ENSSPAG00000018579cpsf36780.728Stegastes_partitus
ENSGAGG00000025583CPSF39394.004ENSSSCG00000020799CPSF37494.004Sus_scrofa
ENSGAGG00000025583CPSF39395.931ENSTGUG00000013016CPSF36895.931Taeniopygia_guttata
ENSGAGG00000025583CPSF39479.830ENSTRUG00000007030cpsf39876.961Takifugu_rubripes
ENSGAGG00000025583CPSF38073.464ENSTRUG00000013905CPSF39973.464Takifugu_rubripes
ENSGAGG00000025583CPSF37399.333ENSTBEG00000002707CPSF35299.333Tupaia_belangeri
ENSGAGG00000025583CPSF36884.783ENSTTRG00000000861CPSF35084.783Tursiops_truncatus
ENSGAGG00000025583CPSF38894.785ENSUAMG00000007535CPSF36394.785Ursus_americanus
ENSGAGG00000025583CPSF39394.218ENSUMAG00000003676CPSF37294.218Ursus_maritimus
ENSGAGG00000025583CPSF38791.284ENSVPAG00000008041CPSF36991.284Vicugna_pacos
ENSGAGG00000025583CPSF39394.218ENSVVUG00000002194CPSF36894.218Vulpes_vulpes
ENSGAGG00000025583CPSF39385.288ENSXETG00000008263cpsf36885.288Xenopus_tropicalis
ENSGAGG00000025583CPSF37480.054ENSXCOG00000000957-8780.054Xiphophorus_couchianus
ENSGAGG00000025583CPSF39379.443ENSXCOG00000019695cpsf36779.443Xiphophorus_couchianus
ENSGAGG00000025583CPSF39379.443ENSXMAG00000009784cpsf37279.443Xiphophorus_maculatus
ENSGAGG00000025583CPSF39383.940ENSXMAG00000027291CPSF36883.940Xiphophorus_maculatus

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