EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000000243 (Gene tree)
Gene ID: 395228
Gene Symbol: RDM1
Alias: RAD52B
Full Name: Gallus gallus RAD52 motif containing 1 (RDM1)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 4835 bases
Position: chr27:4030006-4034840
Accession: NM_204546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000000321	RRM_1	PF00076.22	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000000322	-	1424	XM_015299306	ENSGALP00000000321	277 (aa)	XP_015154792	F1NKR6

Gene Model

Click here to download ENSGALG00000000243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000000243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000000243	RDM1	97	53.791	ENSG00000278023	RDM1	96	63.636	Homo_sapiens
ENSGALG00000000243	RDM1	79	38.667	ENSAPOG00000021886	zgc:103564	84	38.667	Acanthochromis_polyacanthus
ENSGALG00000000243	RDM1	95	39.777	ENSAPEG00000008929	zgc:103564	98	39.777	Amphiprion_percula
ENSGALG00000000243	RDM1	91	83.658	ENSAPLG00000004384	RDM1	99	83.658	Anas_platyrhynchos
ENSGALG00000000243	RDM1	97	57.609	ENSACAG00000012989	-	100	58.696	Anolis_carolinensis
ENSGALG00000000243	RDM1	97	53.763	ENSANAG00000032752	RDM1	95	62.121	Aotus_nancymaae
ENSGALG00000000243	RDM1	97	53.237	ENSBTAG00000000030	RDM1	97	53.237	Bos_taurus
ENSGALG00000000243	RDM1	88	55.294	ENSCJAG00000015031	RDM1	95	63.636	Callithrix_jacchus
ENSGALG00000000243	RDM1	88	51.751	ENSCAFG00000015160	-	100	51.751	Canis_familiaris
ENSGALG00000000243	RDM1	97	52.518	ENSCHIG00000020607	RDM1	98	52.518	Capra_hircus
ENSGALG00000000243	RDM1	97	52.158	ENSCPOG00000001495	-	96	52.158	Cavia_porcellus
ENSGALG00000000243	RDM1	95	53.818	ENSCCAG00000035763	RDM1	95	62.121	Cebus_capucinus
ENSGALG00000000243	RDM1	97	54.874	ENSCATG00000044451	RDM1	95	63.636	Cercocebus_atys
ENSGALG00000000243	RDM1	87	55.285	ENSCSAG00000006209	RDM1	93	55.285	Chlorocebus_sabaeus
ENSGALG00000000243	RDM1	81	73.568	ENSCPBG00000009105	RDM1	96	71.486	Chrysemys_picta_bellii
ENSGALG00000000243	RDM1	97	53.791	ENSCANG00000041322	RDM1	86	66.337	Colobus_angolensis_palliatus
ENSGALG00000000243	RDM1	95	54.779	ENSCGRG00001015927	Rdm1	97	54.710	Cricetulus_griseus_chok1gshd
ENSGALG00000000243	RDM1	89	39.370	ENSCVAG00000001956	zgc:103564	98	38.971	Cyprinodon_variegatus
ENSGALG00000000243	RDM1	87	55.691	ENSDNOG00000045224	-	91	55.691	Dasypus_novemcinctus
ENSGALG00000000243	RDM1	67	55.155	ENSEASG00005010554	RDM1	69	55.155	Equus_asinus_asinus
ENSGALG00000000243	RDM1	88	54.297	ENSECAG00000022182	RDM1	91	54.297	Equus_caballus
ENSGALG00000000243	RDM1	86	52.459	ENSEEUG00000006127	RDM1	97	52.459	Erinaceus_europaeus
ENSGALG00000000243	RDM1	79	55.066	ENSFCAG00000043429	RDM1	95	65.909	Felis_catus
ENSGALG00000000243	RDM1	79	73.874	ENSGAGG00000000293	-	78	71.837	Gopherus_agassizii
ENSGALG00000000243	RDM1	97	54.152	ENSGGOG00000010584	RDM1	95	63.636	Gorilla_gorilla
ENSGALG00000000243	RDM1	97	38.163	ENSHCOG00000002518	-	97	39.552	Hippocampus_comes
ENSGALG00000000243	RDM1	97	52.347	ENSSTOG00000022491	RDM1	97	52.347	Ictidomys_tridecemlineatus
ENSGALG00000000243	RDM1	98	52.837	ENSLAFG00000029300	RDM1	98	52.837	Loxodonta_africana
ENSGALG00000000243	RDM1	97	54.874	ENSMFAG00000032968	RDM1	95	63.636	Macaca_fascicularis
ENSGALG00000000243	RDM1	97	54.874	ENSMMUG00000006847	RDM1	86	67.327	Macaca_mulatta
ENSGALG00000000243	RDM1	97	54.874	ENSMNEG00000039977	RDM1	95	63.636	Macaca_nemestrina
ENSGALG00000000243	RDM1	97	55.235	ENSMLEG00000041158	RDM1	86	67.327	Mandrillus_leucophaeus
ENSGALG00000000243	RDM1	90	93.173	ENSMGAG00000008774	RDM1	100	93.173	Meleagris_gallopavo
ENSGALG00000000243	RDM1	97	55.072	ENSMAUG00000018559	Rdm1	97	55.072	Mesocricetus_auratus
ENSGALG00000000243	RDM1	97	54.152	ENSMICG00000038651	RDM1	97	54.152	Microcebus_murinus
ENSGALG00000000243	RDM1	96	52.941	ENSMOCG00000015095	Rdm1	99	52.941	Microtus_ochrogaster
ENSGALG00000000243	RDM1	97	53.430	ENSMODG00000011101	RDM1	100	53.430	Monodelphis_domestica
ENSGALG00000000243	RDM1	97	52.920	MGP_CAROLIEiJ_G0017226	Rdm1	97	52.920	Mus_caroli
ENSGALG00000000243	RDM1	97	53.261	ENSMUSG00000010362	Rdm1	97	53.261	Mus_musculus
ENSGALG00000000243	RDM1	97	52.555	MGP_PahariEiJ_G0018356	Rdm1	97	52.555	Mus_pahari
ENSGALG00000000243	RDM1	97	52.174	MGP_SPRETEiJ_G0018069	Rdm1	97	52.174	Mus_spretus
ENSGALG00000000243	RDM1	97	54.839	ENSMPUG00000008363	RDM1	97	54.839	Mustela_putorius_furo
ENSGALG00000000243	RDM1	97	54.513	ENSNLEG00000014173	RDM1	87	68.317	Nomascus_leucogenys
ENSGALG00000000243	RDM1	88	55.378	ENSMEUG00000015826	RDM1	100	55.378	Notamacropus_eugenii
ENSGALG00000000243	RDM1	88	55.118	ENSOCUG00000022704	RDM1	97	55.118	Oryctolagus_cuniculus
ENSGALG00000000243	RDM1	97	53.430	ENSOGAG00000011332	RDM1	97	53.430	Otolemur_garnettii
ENSGALG00000000243	RDM1	97	54.874	ENSPPAG00000029969	RDM1	97	54.874	Pan_paniscus
ENSGALG00000000243	RDM1	97	54.513	ENSPTRG00000009031	RDM1	95	64.394	Pan_troglodytes
ENSGALG00000000243	RDM1	97	55.235	ENSPANG00000022933	RDM1	95	64.394	Papio_anubis
ENSGALG00000000243	RDM1	95	52.963	ENSPEMG00000018985	Rdm1	99	52.500	Peromyscus_maniculatus_bairdii
ENSGALG00000000243	RDM1	97	52.500	ENSPPYG00000008198	RDM1	97	52.500	Pongo_abelii
ENSGALG00000000243	RDM1	97	52.708	ENSPCOG00000017995	RDM1	95	62.879	Propithecus_coquereli
ENSGALG00000000243	RDM1	88	54.762	ENSPVAG00000001116	RDM1	100	54.762	Pteropus_vampyrus
ENSGALG00000000243	RDM1	97	53.261	ENSRNOG00000020751	Rdm1	97	53.261	Rattus_norvegicus
ENSGALG00000000243	RDM1	97	53.791	ENSRBIG00000030000	RDM1	95	63.636	Rhinopithecus_bieti
ENSGALG00000000243	RDM1	97	54.152	ENSRROG00000035242	RDM1	86	67.327	Rhinopithecus_roxellana
ENSGALG00000000243	RDM1	97	56.159	ENSSHAG00000013584	RDM1	100	56.159	Sarcophilus_harrisii
ENSGALG00000000243	RDM1	91	66.797	ENSSPUG00000010941	RDM1	94	66.797	Sphenodon_punctatus
ENSGALG00000000243	RDM1	95	39.636	ENSSPAG00000011690	-	98	40.000	Stegastes_partitus
ENSGALG00000000243	RDM1	87	44.490	ENSSSCG00000017574	-	94	50.667	Sus_scrofa
ENSGALG00000000243	RDM1	87	43.902	ENSTBEG00000010030	RDM1	97	43.902	Tupaia_belangeri
ENSGALG00000000243	RDM1	97	56.679	ENSUAMG00000027279	RDM1	97	56.679	Ursus_americanus
ENSGALG00000000243	RDM1	97	56.679	ENSUMAG00000015423	RDM1	95	56.679	Ursus_maritimus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005730	nucleolus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component