EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000000538 (Gene tree)
Gene ID: 419956
Gene Symbol: RNF113A
Alias: RNF113B
Full Name: ring finger protein 113A
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 6497 bases
Position: chr27:5196842-5203338
Accession: 419956
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000066748	zf-CCCH	PF00642.24	8.4e-09	1	1
ENSGALP00000000742	zf-CCCH	PF00642.24	9.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000000743	-	1452	-	ENSGALP00000000742	328 (aa)	-	Q67ER3
ENSGALT00000092586	-	1472	-	ENSGALP00000066748	305 (aa)	-	-

Gene Model

Click here to download ENSGALG00000000538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000000538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000000538	RNF113A	98	76.074	ENSG00000125352	RNF113A	94	76.994	Homo_sapiens
ENSGALG00000000538	RNF113A	93	61.812	ENSG00000139797	RNF113B	92	62.500	Homo_sapiens
ENSGALG00000000538	RNF113A	92	76.744	ENSAPOG00000017510	rnf113a	93	76.744	Acanthochromis_polyacanthus
ENSGALG00000000538	RNF113A	98	73.795	ENSAMEG00000019845	-	94	75.301	Ailuropoda_melanoleuca
ENSGALG00000000538	RNF113A	95	66.346	ENSACIG00000007458	rnf113a	94	67.208	Amphilophus_citrinellus
ENSGALG00000000538	RNF113A	92	76.744	ENSAOCG00000003485	rnf113a	93	76.744	Amphiprion_ocellaris
ENSGALG00000000538	RNF113A	92	76.744	ENSAPEG00000001084	rnf113a	93	76.744	Amphiprion_percula
ENSGALG00000000538	RNF113A	92	74.917	ENSATEG00000022950	rnf113a	93	74.257	Anabas_testudineus
ENSGALG00000000538	RNF113A	89	94.834	ENSAPLG00000012510	-	99	95.203	Anas_platyrhynchos
ENSGALG00000000538	RNF113A	91	84.950	ENSACAG00000012485	-	96	84.950	Anolis_carolinensis
ENSGALG00000000538	RNF113A	98	74.923	ENSANAG00000013925	-	95	75.851	Aotus_nancymaae
ENSGALG00000000538	RNF113A	93	63.023	ENSANAG00000020431	RNF113B	92	63.399	Aotus_nancymaae
ENSGALG00000000538	RNF113A	91	78.033	ENSANAG00000024332	-	91	79.016	Aotus_nancymaae
ENSGALG00000000538	RNF113A	94	76.547	ENSACLG00000025256	rnf113a	94	77.419	Astatotilapia_calliptera
ENSGALG00000000538	RNF113A	94	74.351	ENSAMXG00000011273	rnf113a	95	75.325	Astyanax_mexicanus
ENSGALG00000000538	RNF113A	98	74.540	ENSBTAG00000006034	RNF113A	95	75.767	Bos_taurus
ENSGALG00000000538	RNF113A	98	69.162	ENSBTAG00000008684	-	90	71.835	Bos_taurus
ENSGALG00000000538	RNF113A	87	47.586	WBGene00010476	rnf-113	74	47.603	Caenorhabditis_elegans
ENSGALG00000000538	RNF113A	98	74.233	ENSCJAG00000022327	RNF113A	95	75.153	Callithrix_jacchus
ENSGALG00000000538	RNF113A	93	64.952	ENSCJAG00000004501	RNF113B	92	65.359	Callithrix_jacchus
ENSGALG00000000538	RNF113A	98	75.529	ENSCAFG00000018430	-	94	76.133	Canis_familiaris
ENSGALG00000000538	RNF113A	98	63.554	ENSCAFG00000018373	-	94	64.264	Canis_familiaris
ENSGALG00000000538	RNF113A	98	75.529	ENSCAFG00020004044	-	94	76.133	Canis_lupus_dingo
ENSGALG00000000538	RNF113A	98	63.855	ENSCAFG00020020280	-	94	64.565	Canis_lupus_dingo
ENSGALG00000000538	RNF113A	98	70.279	ENSCHIG00000015616	-	90	72.787	Capra_hircus
ENSGALG00000000538	RNF113A	98	75.153	ENSCHIG00000018820	-	95	76.074	Capra_hircus
ENSGALG00000000538	RNF113A	98	75.229	ENSTSYG00000001308	RNF113A	94	76.147	Carlito_syrichta
ENSGALG00000000538	RNF113A	98	76.615	ENSCPOG00000038517	-	96	76.615	Cavia_porcellus
ENSGALG00000000538	RNF113A	98	74.847	ENSCCAG00000013617	RNF113A	95	75.767	Cebus_capucinus
ENSGALG00000000538	RNF113A	92	65.686	ENSCCAG00000021327	RNF113B	92	65.359	Cebus_capucinus
ENSGALG00000000538	RNF113A	98	76.147	ENSCATG00000002702	RNF113A	95	77.064	Cercocebus_atys
ENSGALG00000000538	RNF113A	99	73.021	ENSCLAG00000017479	-	98	73.900	Chinchilla_lanigera
ENSGALG00000000538	RNF113A	98	64.923	ENSCSAG00000019472	-	95	64.923	Chlorocebus_sabaeus
ENSGALG00000000538	RNF113A	98	60.185	ENSCSAG00000000222	RNF113B	94	60.185	Chlorocebus_sabaeus
ENSGALG00000000538	RNF113A	76	73.913	ENSCHOG00000008711	-	95	75.889	Choloepus_hoffmanni
ENSGALG00000000538	RNF113A	100	87.500	ENSCPBG00000026980	-	100	87.500	Chrysemys_picta_bellii
ENSGALG00000000538	RNF113A	90	66.000	ENSCING00000009197	-	92	66.000	Ciona_intestinalis
ENSGALG00000000538	RNF113A	92	64.145	ENSCSAVG00000006210	-	90	65.993	Ciona_savignyi
ENSGALG00000000538	RNF113A	98	76.074	ENSCANG00000037715	RNF113A	95	76.687	Colobus_angolensis_palliatus
ENSGALG00000000538	RNF113A	94	60.256	ENSCANG00000041552	RNF113B	93	61.184	Colobus_angolensis_palliatus
ENSGALG00000000538	RNF113A	98	75.460	ENSCGRG00001002251	Rnf113a1	94	75.767	Cricetulus_griseus_chok1gshd
ENSGALG00000000538	RNF113A	93	75.884	ENSCGRG00000016675	Rnf113a2	91	76.299	Cricetulus_griseus_crigri
ENSGALG00000000538	RNF113A	98	75.153	ENSCGRG00000019441	Rnf113a1	94	75.460	Cricetulus_griseus_crigri
ENSGALG00000000538	RNF113A	95	72.756	ENSCSEG00000021570	rnf113a	81	73.203	Cynoglossus_semilaevis
ENSGALG00000000538	RNF113A	93	74.013	ENSCVAG00000011305	rnf113a	93	73.355	Cyprinodon_variegatus
ENSGALG00000000538	RNF113A	94	74.351	ENSDARG00000037930	rnf113a	93	75.329	Danio_rerio
ENSGALG00000000538	RNF113A	94	74.204	ENSDORG00000027624	Rnf113a2	92	74.598	Dipodomys_ordii
ENSGALG00000000538	RNF113A	93	59.688	FBgn0038772	mdlc	89	59.875	Drosophila_melanogaster
ENSGALG00000000538	RNF113A	93	77.199	ENSETEG00000018346	-	95	74.691	Echinops_telfairi
ENSGALG00000000538	RNF113A	93	73.026	ENSEBUG00000016079	rnf113a	92	73.026	Eptatretus_burgeri
ENSGALG00000000538	RNF113A	98	74.006	ENSEASG00005010538	-	94	74.618	Equus_asinus_asinus
ENSGALG00000000538	RNF113A	92	76.623	ENSECAG00000004638	-	96	77.273	Equus_caballus
ENSGALG00000000538	RNF113A	99	75.588	ENSECAG00000003934	-	98	76.176	Equus_caballus
ENSGALG00000000538	RNF113A	94	74.026	ENSELUG00000020657	rnf113a	95	74.026	Esox_lucius
ENSGALG00000000538	RNF113A	98	75.153	ENSFCAG00000024392	-	91	76.380	Felis_catus
ENSGALG00000000538	RNF113A	94	75.478	ENSFCAG00000028962	-	90	77.097	Felis_catus
ENSGALG00000000538	RNF113A	98	75.460	ENSFCAG00000025700	-	94	76.687	Felis_catus
ENSGALG00000000538	RNF113A	87	92.424	ENSFALG00000004633	-	96	91.186	Ficedula_albicollis
ENSGALG00000000538	RNF113A	95	72.698	ENSFHEG00000023305	rnf113a	94	72.549	Fundulus_heteroclitus
ENSGALG00000000538	RNF113A	94	73.041	ENSGMOG00000004541	rnf113a	95	73.041	Gadus_morhua
ENSGALG00000000538	RNF113A	91	75.748	ENSGAFG00000011863	rnf113a	92	74.333	Gambusia_affinis
ENSGALG00000000538	RNF113A	91	73.203	ENSGACG00000009738	rnf113a	92	73.529	Gasterosteus_aculeatus
ENSGALG00000000538	RNF113A	100	87.500	ENSGAGG00000020490	-	100	87.500	Gopherus_agassizii
ENSGALG00000000538	RNF113A	93	62.460	ENSGGOG00000023052	RNF113B	92	63.158	Gorilla_gorilla
ENSGALG00000000538	RNF113A	98	76.074	ENSGGOG00000002324	RNF113A	94	76.994	Gorilla_gorilla
ENSGALG00000000538	RNF113A	94	76.221	ENSHBUG00000008626	rnf113a	94	76.221	Haplochromis_burtoni
ENSGALG00000000538	RNF113A	98	73.874	ENSHGLG00000019571	-	94	75.862	Heterocephalus_glaber_female
ENSGALG00000000538	RNF113A	98	72.861	ENSHGLG00100019582	-	94	75.077	Heterocephalus_glaber_male
ENSGALG00000000538	RNF113A	95	75.806	ENSHCOG00000003421	rnf113a	94	76.221	Hippocampus_comes
ENSGALG00000000538	RNF113A	92	76.159	ENSIPUG00000013431	RNF113A	94	75.738	Ictalurus_punctatus
ENSGALG00000000538	RNF113A	94	76.358	ENSSTOG00000019866	-	90	75.806	Ictidomys_tridecemlineatus
ENSGALG00000000538	RNF113A	72	62.896	ENSJJAG00000019849	Rnf113a1	76	62.896	Jaculus_jaculus
ENSGALG00000000538	RNF113A	94	72.964	ENSKMAG00000009830	rnf113a	94	72.876	Kryptolebias_marmoratus
ENSGALG00000000538	RNF113A	92	75.578	ENSLBEG00000004627	rnf113a	93	75.578	Labrus_bergylta
ENSGALG00000000538	RNF113A	98	75.312	ENSLACG00000013178	rnf113a	97	76.250	Latimeria_chalumnae
ENSGALG00000000538	RNF113A	95	73.885	ENSLOCG00000011785	rnf113a	94	74.351	Lepisosteus_oculatus
ENSGALG00000000538	RNF113A	98	74.540	ENSLAFG00000013906	-	95	74.462	Loxodonta_africana
ENSGALG00000000538	RNF113A	98	76.147	ENSMFAG00000018472	RNF113A	95	77.064	Macaca_fascicularis
ENSGALG00000000538	RNF113A	98	76.147	ENSMMUG00000020223	RNF113A	95	77.064	Macaca_mulatta
ENSGALG00000000538	RNF113A	98	76.147	ENSMNEG00000019778	RNF113A	95	77.064	Macaca_nemestrina
ENSGALG00000000538	RNF113A	80	71.311	ENSMLEG00000038757	RNF113B	82	71.311	Mandrillus_leucophaeus
ENSGALG00000000538	RNF113A	98	76.147	ENSMLEG00000020750	RNF113A	95	77.064	Mandrillus_leucophaeus
ENSGALG00000000538	RNF113A	92	75.578	ENSMAMG00000021895	rnf113a	93	75.578	Mastacembelus_armatus
ENSGALG00000000538	RNF113A	94	76.547	ENSMZEG00005023086	rnf113a	94	76.547	Maylandia_zebra
ENSGALG00000000538	RNF113A	90	98.639	ENSMGAG00000001753	-	100	98.639	Meleagris_gallopavo
ENSGALG00000000538	RNF113A	94	74.920	ENSMICG00000038084	-	90	75.896	Microcebus_murinus
ENSGALG00000000538	RNF113A	98	74.390	ENSMICG00000001750	-	94	75.610	Microcebus_murinus
ENSGALG00000000538	RNF113A	98	74.540	ENSMOCG00000005370	-	88	77.023	Microtus_ochrogaster
ENSGALG00000000538	RNF113A	92	73.927	ENSMMOG00000016954	rnf113a	93	73.927	Mola_mola
ENSGALG00000000538	RNF113A	92	69.767	ENSMALG00000007938	rnf113a	92	69.767	Monopterus_albus
ENSGALG00000000538	RNF113A	93	76.206	MGP_CAROLIEiJ_G0017943	Rnf113a2	91	76.623	Mus_caroli
ENSGALG00000000538	RNF113A	94	77.742	ENSMUSG00000036537	Rnf113a1	90	77.850	Mus_musculus
ENSGALG00000000538	RNF113A	94	75.796	ENSMUSG00000098134	Rnf113a2	92	76.206	Mus_musculus
ENSGALG00000000538	RNF113A	94	76.115	MGP_PahariEiJ_G0029702	Rnf113a2	92	76.527	Mus_pahari
ENSGALG00000000538	RNF113A	98	74.923	MGP_PahariEiJ_G0031547	Rnf113a1	94	75.232	Mus_pahari
ENSGALG00000000538	RNF113A	94	75.796	MGP_SPRETEiJ_G0018788	Rnf113a2	92	76.206	Mus_spretus
ENSGALG00000000538	RNF113A	94	77.742	MGP_SPRETEiJ_G0034156	Rnf113a1	90	77.850	Mus_spretus
ENSGALG00000000538	RNF113A	98	74.848	ENSMPUG00000019358	-	94	76.364	Mustela_putorius_furo
ENSGALG00000000538	RNF113A	94	75.786	ENSMLUG00000016812	-	90	77.316	Myotis_lucifugus
ENSGALG00000000538	RNF113A	98	74.164	ENSMLUG00000010856	-	96	73.860	Myotis_lucifugus
ENSGALG00000000538	RNF113A	94	76.547	ENSNBRG00000004314	rnf113a	94	76.547	Neolamprologus_brichardi
ENSGALG00000000538	RNF113A	93	61.905	ENSNLEG00000007844	RNF113B	92	62.581	Nomascus_leucogenys
ENSGALG00000000538	RNF113A	98	76.074	ENSNLEG00000018333	RNF113A	94	76.994	Nomascus_leucogenys
ENSGALG00000000538	RNF113A	93	76.341	ENSMEUG00000001855	-	94	74.921	Notamacropus_eugenii
ENSGALG00000000538	RNF113A	94	75.570	ENSONIG00000000741	rnf113a	94	75.570	Oreochromis_niloticus
ENSGALG00000000538	RNF113A	98	72.755	ENSOANG00000002592	-	96	72.755	Ornithorhynchus_anatinus
ENSGALG00000000538	RNF113A	98	74.772	ENSOCUG00000016207	-	90	78.065	Oryctolagus_cuniculus
ENSGALG00000000538	RNF113A	94	75.649	ENSORLG00000002442	rnf113a	93	77.409	Oryzias_latipes
ENSGALG00000000538	RNF113A	94	75.974	ENSORLG00020011512	rnf113a	93	77.741	Oryzias_latipes_hni
ENSGALG00000000538	RNF113A	94	75.649	ENSORLG00015004382	rnf113a	93	77.409	Oryzias_latipes_hsok
ENSGALG00000000538	RNF113A	92	78.146	ENSOMEG00000020197	rnf113a	93	78.405	Oryzias_melastigma
ENSGALG00000000538	RNF113A	98	73.313	ENSOGAG00000011638	RNF113B	94	73.313	Otolemur_garnettii
ENSGALG00000000538	RNF113A	98	74.312	ENSOGAG00000031602	RNF113A	94	75.229	Otolemur_garnettii
ENSGALG00000000538	RNF113A	98	75.153	ENSOARG00000009771	-	95	76.074	Ovis_aries
ENSGALG00000000538	RNF113A	98	69.091	ENSOARG00000015294	-	90	71.795	Ovis_aries
ENSGALG00000000538	RNF113A	98	76.074	ENSPPAG00000009537	RNF113A	94	76.994	Pan_paniscus
ENSGALG00000000538	RNF113A	93	62.783	ENSPPAG00000040641	RNF113B	92	63.487	Pan_paniscus
ENSGALG00000000538	RNF113A	94	75.719	ENSPPRG00000020640	-	90	77.994	Panthera_pardus
ENSGALG00000000538	RNF113A	98	75.460	ENSPPRG00000011512	-	94	76.687	Panthera_pardus
ENSGALG00000000538	RNF113A	98	75.460	ENSPTIG00000007986	-	94	76.687	Panthera_tigris_altaica
ENSGALG00000000538	RNF113A	93	62.783	ENSPTRG00000005987	RNF113B	92	63.487	Pan_troglodytes
ENSGALG00000000538	RNF113A	98	76.074	ENSPTRG00000022231	RNF113A	94	76.994	Pan_troglodytes
ENSGALG00000000538	RNF113A	98	76.147	ENSPANG00000011522	RNF113A	95	77.064	Papio_anubis
ENSGALG00000000538	RNF113A	95	75.079	ENSPKIG00000016796	rnf113a	96	75.719	Paramormyrops_kingsleyae
ENSGALG00000000538	RNF113A	90	88.095	ENSPSIG00000012676	-	99	88.095	Pelodiscus_sinensis
ENSGALG00000000538	RNF113A	92	75.908	ENSPMGG00000009668	rnf113a	97	73.651	Periophthalmus_magnuspinnatus
ENSGALG00000000538	RNF113A	98	75.229	ENSPEMG00000002490	Rnf113a1	94	75.535	Peromyscus_maniculatus_bairdii
ENSGALG00000000538	RNF113A	88	72.852	ENSPMAG00000005184	rnf113a	94	74.101	Petromyzon_marinus
ENSGALG00000000538	RNF113A	94	76.636	ENSPCIG00000028916	-	91	75.312	Phascolarctos_cinereus
ENSGALG00000000538	RNF113A	96	71.429	ENSPFOG00000014248	rnf113a	97	73.016	Poecilia_formosa
ENSGALG00000000538	RNF113A	96	71.429	ENSPLAG00000010435	rnf113a	92	76.000	Poecilia_latipinna
ENSGALG00000000538	RNF113A	96	73.101	ENSPMEG00000010641	rnf113a	97	73.016	Poecilia_mexicana
ENSGALG00000000538	RNF113A	96	73.101	ENSPREG00000009900	rnf113a	92	76.000	Poecilia_reticulata
ENSGALG00000000538	RNF113A	93	64.078	ENSPPYG00000005460	RNF113B	93	64.803	Pongo_abelii
ENSGALG00000000538	RNF113A	98	75.767	ENSPPYG00000020676	RNF113A	94	75.767	Pongo_abelii
ENSGALG00000000538	RNF113A	98	75.617	ENSPCAG00000014633	-	89	78.105	Procavia_capensis
ENSGALG00000000538	RNF113A	94	73.248	ENSPCOG00000005671	-	89	74.920	Propithecus_coquereli
ENSGALG00000000538	RNF113A	94	76.547	ENSPNYG00000013863	rnf113a	94	76.547	Pundamilia_nyererei
ENSGALG00000000538	RNF113A	95	74.038	ENSPNAG00000017428	rnf113a	95	75.325	Pygocentrus_nattereri
ENSGALG00000000538	RNF113A	98	76.074	ENSRNOG00000059412	Rnf113a1	94	76.380	Rattus_norvegicus
ENSGALG00000000538	RNF113A	98	76.074	ENSRNOG00000034040	LOC108348079	94	76.380	Rattus_norvegicus
ENSGALG00000000538	RNF113A	98	76.074	ENSRBIG00000017389	RNF113A	95	76.687	Rhinopithecus_bieti
ENSGALG00000000538	RNF113A	94	60.897	ENSRBIG00000036094	RNF113B	92	62.500	Rhinopithecus_bieti
ENSGALG00000000538	RNF113A	98	76.074	ENSRROG00000012149	RNF113A	95	76.687	Rhinopithecus_roxellana
ENSGALG00000000538	RNF113A	94	60.897	ENSRROG00000045661	RNF113B	92	62.500	Rhinopithecus_roxellana
ENSGALG00000000538	RNF113A	98	74.847	ENSSBOG00000017704	RNF113A	95	75.460	Saimiri_boliviensis_boliviensis
ENSGALG00000000538	RNF113A	94	61.538	ENSSBOG00000029719	RNF113B	92	64.495	Saimiri_boliviensis_boliviensis
ENSGALG00000000538	RNF113A	93	75.862	ENSSHAG00000008839	-	96	72.404	Sarcophilus_harrisii
ENSGALG00000000538	RNF113A	95	74.760	ENSSFOG00015016567	rnf113a	94	75.000	Scleropages_formosus
ENSGALG00000000538	RNF113A	92	75.248	ENSSMAG00000009235	rnf113a	93	75.248	Scophthalmus_maximus
ENSGALG00000000538	RNF113A	92	75.748	ENSSDUG00000022244	rnf113a	93	75.748	Seriola_dumerili
ENSGALG00000000538	RNF113A	92	75.748	ENSSLDG00000018582	rnf113a	93	75.748	Seriola_lalandi_dorsalis
ENSGALG00000000538	RNF113A	98	74.847	ENSSARG00000010436	-	94	76.380	Sorex_araneus
ENSGALG00000000538	RNF113A	96	87.302	ENSSPUG00000018786	-	86	88.065	Sphenodon_punctatus
ENSGALG00000000538	RNF113A	92	76.412	ENSSPAG00000013187	rnf113a	93	76.412	Stegastes_partitus
ENSGALG00000000538	RNF113A	98	72.340	ENSSSCG00000032973	-	90	77.419	Sus_scrofa
ENSGALG00000000538	RNF113A	100	92.378	ENSTGUG00000001947	-	100	92.378	Taeniopygia_guttata
ENSGALG00000000538	RNF113A	97	70.312	ENSTRUG00000011142	rnf113a	95	71.429	Takifugu_rubripes
ENSGALG00000000538	RNF113A	94	73.871	ENSTNIG00000014938	rnf113a	95	74.110	Tetraodon_nigroviridis
ENSGALG00000000538	RNF113A	98	74.468	ENSTBEG00000012687	-	90	78.387	Tupaia_belangeri
ENSGALG00000000538	RNF113A	94	77.564	ENSUAMG00000024564	-	91	78.964	Ursus_americanus
ENSGALG00000000538	RNF113A	94	77.564	ENSUMAG00000002167	-	93	78.964	Ursus_maritimus
ENSGALG00000000538	RNF113A	90	74.832	ENSVPAG00000004521	-	94	74.832	Vicugna_pacos
ENSGALG00000000538	RNF113A	53	73.913	ENSVVUG00000004522	-	79	63.830	Vulpes_vulpes
ENSGALG00000000538	RNF113A	98	75.529	ENSVVUG00000011662	-	94	76.133	Vulpes_vulpes
ENSGALG00000000538	RNF113A	95	76.730	ENSXETG00000002042	rnf113a	96	76.677	Xenopus_tropicalis
ENSGALG00000000538	RNF113A	91	74.751	ENSXCOG00000017542	rnf113a	95	74.667	Xiphophorus_couchianus
ENSGALG00000000538	RNF113A	96	72.785	ENSXMAG00000008169	rnf113a	97	72.698	Xiphophorus_maculatus