EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000000581 (Gene tree)
Gene ID: 419959
Gene Symbol: DDX42
Alias: -
Full Name: Gallus gallus DEAD-box helicase 42 (DDX42)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 16415 bases
Position: chr27:5225378-5241792
Accession: NM_001030926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000000810	ResIII	PF04851.15	8.4e-07	1	1
ENSGALP00000000810	DEAD	PF00270.29	1.7e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000000811	-	4265	-	ENSGALP00000000810	944 (aa)	-	F1NJ40

Gene Model

Click here to download ENSGALG00000000581's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000000581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000000581	DDX42	100	81.402	ENSG00000198231	DDX42	97	92.708	Homo_sapiens
ENSGALG00000000581	DDX42	84	79.146	ENSAPOG00000017675	ddx42	99	72.467	Acanthochromis_polyacanthus
ENSGALG00000000581	DDX42	100	82.238	ENSAMEG00000003200	DDX42	100	83.385	Ailuropoda_melanoleuca
ENSGALG00000000581	DDX42	67	82.003	ENSACIG00000007376	ddx42	99	71.499	Amphilophus_citrinellus
ENSGALG00000000581	DDX42	84	79.375	ENSAOCG00000003520	ddx42	99	70.405	Amphiprion_ocellaris
ENSGALG00000000581	DDX42	100	70.860	ENSAPEG00000000984	ddx42	99	70.803	Amphiprion_percula
ENSGALG00000000581	DDX42	99	70.619	ENSATEG00000022920	ddx42	99	71.339	Anabas_testudineus
ENSGALG00000000581	DDX42	100	94.392	ENSAPLG00000010544	DDX42	100	95.026	Anas_platyrhynchos
ENSGALG00000000581	DDX42	100	84.503	ENSACAG00000003994	DDX42	99	83.979	Anolis_carolinensis
ENSGALG00000000581	DDX42	100	82.541	ENSANAG00000035693	DDX42	99	86.867	Aotus_nancymaae
ENSGALG00000000581	DDX42	84	79.297	ENSACLG00000025113	ddx42	99	71.473	Astatotilapia_calliptera
ENSGALG00000000581	DDX42	77	81.070	ENSAMXG00000011435	ddx42	100	69.121	Astyanax_mexicanus
ENSGALG00000000581	DDX42	100	81.715	ENSBTAG00000021058	DDX42	97	87.746	Bos_taurus
ENSGALG00000000581	DDX42	63	53.145	WBGene00008119	C46F11.4	78	53.208	Caenorhabditis_elegans
ENSGALG00000000581	DDX42	100	83.525	ENSCJAG00000019649	DDX42	99	92.876	Callithrix_jacchus
ENSGALG00000000581	DDX42	100	82.425	ENSCAFG00000012818	DDX42	100	83.680	Canis_familiaris
ENSGALG00000000581	DDX42	100	82.528	ENSCAFG00020026631	DDX42	100	83.784	Canis_lupus_dingo
ENSGALG00000000581	DDX42	100	82.988	ENSCHIG00000014431	DDX42	100	83.420	Capra_hircus
ENSGALG00000000581	DDX42	100	82.323	ENSTSYG00000001380	DDX42	100	83.576	Carlito_syrichta
ENSGALG00000000581	DDX42	74	68.956	ENSCAPG00000013621	DDX42	95	68.097	Cavia_aperea
ENSGALG00000000581	DDX42	100	83.195	ENSCPOG00000005633	DDX42	100	83.212	Cavia_porcellus
ENSGALG00000000581	DDX42	100	77.629	ENSCCAG00000020612	DDX42	98	87.744	Cebus_capucinus
ENSGALG00000000581	DDX42	100	83.577	ENSCATG00000030490	DDX42	100	83.264	Cercocebus_atys
ENSGALG00000000581	DDX42	100	83.385	ENSCLAG00000003497	DDX42	100	82.762	Chinchilla_lanigera
ENSGALG00000000581	DDX42	100	77.530	ENSCSAG00000003914	DDX42	100	78.586	Chlorocebus_sabaeus
ENSGALG00000000581	DDX42	79	92.857	ENSCHOG00000006241	DDX42	75	92.857	Choloepus_hoffmanni
ENSGALG00000000581	DDX42	100	86.743	ENSCPBG00000026682	DDX42	100	86.411	Chrysemys_picta_bellii
ENSGALG00000000581	DDX42	100	83.577	ENSCANG00000034663	DDX42	95	92.814	Colobus_angolensis_palliatus
ENSGALG00000000581	DDX42	100	82.851	ENSCGRG00001009775	Ddx42	100	82.541	Cricetulus_griseus_chok1gshd
ENSGALG00000000581	DDX42	100	82.851	ENSCGRG00000011718	Ddx42	100	82.541	Cricetulus_griseus_crigri
ENSGALG00000000581	DDX42	82	78.873	ENSCSEG00000021574	ddx42	99	69.675	Cynoglossus_semilaevis
ENSGALG00000000581	DDX42	99	70.000	ENSCVAG00000011404	ddx42	99	70.421	Cyprinodon_variegatus
ENSGALG00000000581	DDX42	99	68.144	ENSDARG00000037928	ddx42	99	69.278	Danio_rerio
ENSGALG00000000581	DDX42	100	77.607	ENSDNOG00000007961	DDX42	100	78.882	Dasypus_novemcinctus
ENSGALG00000000581	DDX42	100	75.979	ENSDORG00000004199	Ddx42	100	75.567	Dipodomys_ordii
ENSGALG00000000581	DDX42	65	61.798	FBgn0036104	CG6418	87	57.245	Drosophila_melanogaster
ENSGALG00000000581	DDX42	82	70.521	ENSEBUG00000001155	ddx42	91	72.812	Eptatretus_burgeri
ENSGALG00000000581	DDX42	100	83.228	ENSEASG00005013089	DDX42	99	88.951	Equus_asinus_asinus
ENSGALG00000000581	DDX42	100	81.614	ENSECAG00000022684	DDX42	100	83.161	Equus_caballus
ENSGALG00000000581	DDX42	57	93.254	ENSEEUG00000009144	DDX42	73	93.254	Erinaceus_europaeus
ENSGALG00000000581	DDX42	100	69.864	ENSELUG00000020593	ddx42	100	69.552	Esox_lucius
ENSGALG00000000581	DDX42	100	81.391	ENSFCAG00000003499	DDX42	100	83.576	Felis_catus
ENSGALG00000000581	DDX42	90	92.462	ENSFALG00000004675	DDX42	80	92.462	Ficedula_albicollis
ENSGALG00000000581	DDX42	100	83.005	ENSFDAG00000020516	DDX42	100	83.005	Fukomys_damarensis
ENSGALG00000000581	DDX42	99	69.990	ENSFHEG00000023290	ddx42	99	70.094	Fundulus_heteroclitus
ENSGALG00000000581	DDX42	75	77.292	ENSGMOG00000004595	ddx42	79	76.869	Gadus_morhua
ENSGALG00000000581	DDX42	94	71.875	ENSGAFG00000011846	ddx42	96	71.996	Gambusia_affinis
ENSGALG00000000581	DDX42	99	66.947	ENSGACG00000009782	ddx42	100	66.351	Gasterosteus_aculeatus
ENSGALG00000000581	DDX42	100	87.147	ENSGAGG00000024411	DDX42	99	86.653	Gopherus_agassizii
ENSGALG00000000581	DDX42	100	84.013	ENSGGOG00000006779	DDX42	97	88.671	Gorilla_gorilla
ENSGALG00000000581	DDX42	84	79.297	ENSHBUG00000008705	ddx42	99	71.473	Haplochromis_burtoni
ENSGALG00000000581	DDX42	100	79.123	ENSHGLG00000010024	DDX42	100	78.601	Heterocephalus_glaber_female
ENSGALG00000000581	DDX42	100	81.940	ENSHGLG00100004479	-	100	82.881	Heterocephalus_glaber_male
ENSGALG00000000581	DDX42	96	61.771	ENSHGLG00100007138	-	98	61.771	Heterocephalus_glaber_male
ENSGALG00000000581	DDX42	83	78.544	ENSHCOG00000003357	ddx42	92	78.544	Hippocampus_comes
ENSGALG00000000581	DDX42	79	79.392	ENSIPUG00000013327	ddx42	100	69.497	Ictalurus_punctatus
ENSGALG00000000581	DDX42	100	83.750	ENSSTOG00000008922	DDX42	100	83.438	Ictidomys_tridecemlineatus
ENSGALG00000000581	DDX42	100	82.830	ENSJJAG00000011727	Ddx42	100	82.970	Jaculus_jaculus
ENSGALG00000000581	DDX42	83	78.961	ENSKMAG00000009914	ddx42	99	70.262	Kryptolebias_marmoratus
ENSGALG00000000581	DDX42	80	75.683	ENSLBEG00000004687	ddx42	99	66.176	Labrus_bergylta
ENSGALG00000000581	DDX42	99	74.576	ENSLACG00000013476	DDX42	97	75.710	Latimeria_chalumnae
ENSGALG00000000581	DDX42	100	72.257	ENSLOCG00000011764	ddx42	100	73.467	Lepisosteus_oculatus
ENSGALG00000000581	DDX42	100	83.368	ENSLAFG00000003249	DDX42	100	83.264	Loxodonta_africana
ENSGALG00000000581	DDX42	100	83.577	ENSMFAG00000031356	DDX42	100	83.264	Macaca_fascicularis
ENSGALG00000000581	DDX42	100	83.039	ENSMMUG00000016762	DDX42	96	87.587	Macaca_mulatta
ENSGALG00000000581	DDX42	100	83.577	ENSMNEG00000038250	DDX42	100	83.264	Macaca_nemestrina
ENSGALG00000000581	DDX42	100	80.977	ENSMLEG00000043080	DDX42	100	82.080	Mandrillus_leucophaeus
ENSGALG00000000581	DDX42	83	80.485	ENSMAMG00000021888	ddx42	98	70.729	Mastacembelus_armatus
ENSGALG00000000581	DDX42	84	79.297	ENSMZEG00005023103	ddx42	99	71.473	Maylandia_zebra
ENSGALG00000000581	DDX42	100	98.517	ENSMGAG00000001822	DDX42	100	98.517	Meleagris_gallopavo
ENSGALG00000000581	DDX42	78	87.280	ENSMAUG00000020774	-	94	86.604	Mesocricetus_auratus
ENSGALG00000000581	DDX42	100	82.627	ENSMICG00000009952	DDX42	100	82.316	Microcebus_murinus
ENSGALG00000000581	DDX42	100	82.848	ENSMOCG00000015504	Ddx42	100	82.536	Microtus_ochrogaster
ENSGALG00000000581	DDX42	84	74.275	ENSMMOG00000016963	ddx42	87	69.109	Mola_mola
ENSGALG00000000581	DDX42	99	70.644	ENSMALG00000007800	ddx42	99	71.383	Monopterus_albus
ENSGALG00000000581	DDX42	100	82.335	MGP_CAROLIEiJ_G0017314	Ddx42	100	82.128	Mus_caroli
ENSGALG00000000581	DDX42	100	82.866	ENSMUSG00000020705	Ddx42	100	82.555	Mus_musculus
ENSGALG00000000581	DDX42	71	95.097	MGP_PahariEiJ_G0018444	-	96	94.985	Mus_pahari
ENSGALG00000000581	DDX42	100	82.335	MGP_SPRETEiJ_G0018158	Ddx42	90	92.857	Mus_spretus
ENSGALG00000000581	DDX42	100	80.996	ENSMPUG00000014921	DDX42	100	82.631	Mustela_putorius_furo
ENSGALG00000000581	DDX42	100	81.606	ENSMLUG00000011645	DDX42	100	82.837	Myotis_lucifugus
ENSGALG00000000581	DDX42	100	84.117	ENSNGAG00000021897	Ddx42	100	83.804	Nannospalax_galili
ENSGALG00000000581	DDX42	92	72.634	ENSNBRG00000004466	ddx42	99	70.324	Neolamprologus_brichardi
ENSGALG00000000581	DDX42	100	83.299	ENSNLEG00000004248	DDX42	99	88.531	Nomascus_leucogenys
ENSGALG00000000581	DDX42	73	80.207	ENSMEUG00000013227	-	85	80.207	Notamacropus_eugenii
ENSGALG00000000581	DDX42	100	81.269	ENSOPRG00000014960	DDX42	100	82.816	Ochotona_princeps
ENSGALG00000000581	DDX42	100	79.958	ENSODEG00000007810	DDX42	100	79.335	Octodon_degus
ENSGALG00000000581	DDX42	83	80.432	ENSONIG00000000734	ddx42	99	71.682	Oreochromis_niloticus
ENSGALG00000000581	DDX42	57	90.909	ENSOANG00000000265	DDX42	100	90.909	Ornithorhynchus_anatinus
ENSGALG00000000581	DDX42	97	83.173	ENSOCUG00000004304	DDX42	88	83.892	Oryctolagus_cuniculus
ENSGALG00000000581	DDX42	100	70.126	ENSORLG00000002395	ddx42	100	69.483	Oryzias_latipes
ENSGALG00000000581	DDX42	100	69.001	ENSORLG00020011621	ddx42	100	71.053	Oryzias_latipes_hni
ENSGALG00000000581	DDX42	100	69.979	ENSORLG00015004487	ddx42	100	71.158	Oryzias_latipes_hsok
ENSGALG00000000581	DDX42	82	80.000	ENSOMEG00000020093	ddx42	100	70.625	Oryzias_melastigma
ENSGALG00000000581	DDX42	100	81.474	ENSOGAG00000006872	DDX42	100	82.609	Otolemur_garnettii
ENSGALG00000000581	DDX42	100	82.680	ENSOARG00000013540	DDX42	100	82.462	Ovis_aries
ENSGALG00000000581	DDX42	100	83.908	ENSPPAG00000007496	DDX42	97	88.451	Pan_paniscus
ENSGALG00000000581	DDX42	100	81.493	ENSPPRG00000002740	DDX42	100	83.680	Panthera_pardus
ENSGALG00000000581	DDX42	100	81.660	ENSPTIG00000009932	DDX42	100	83.368	Panthera_tigris_altaica
ENSGALG00000000581	DDX42	100	83.908	ENSPTRG00000009523	DDX42	97	88.451	Pan_troglodytes
ENSGALG00000000581	DDX42	100	83.473	ENSPANG00000020990	DDX42	100	83.159	Papio_anubis
ENSGALG00000000581	DDX42	79	82.423	ENSPKIG00000002901	ddx42	100	69.770	Paramormyrops_kingsleyae
ENSGALG00000000581	DDX42	84	93.985	ENSPSIG00000010289	DDX42	98	93.112	Pelodiscus_sinensis
ENSGALG00000000581	DDX42	100	66.109	ENSPMGG00000009323	ddx42	100	66.460	Periophthalmus_magnuspinnatus
ENSGALG00000000581	DDX42	100	82.766	ENSPEMG00000006755	Ddx42	100	82.559	Peromyscus_maniculatus_bairdii
ENSGALG00000000581	DDX42	79	72.477	ENSPMAG00000005580	ddx42	100	72.739	Petromyzon_marinus
ENSGALG00000000581	DDX42	100	82.070	ENSPCIG00000009093	DDX42	100	81.967	Phascolarctos_cinereus
ENSGALG00000000581	DDX42	99	71.264	ENSPFOG00000014104	ddx42	99	71.086	Poecilia_formosa
ENSGALG00000000581	DDX42	99	71.264	ENSPLAG00000010522	ddx42	99	71.086	Poecilia_latipinna
ENSGALG00000000581	DDX42	100	69.959	ENSPMEG00000010744	ddx42	99	70.497	Poecilia_mexicana
ENSGALG00000000581	DDX42	100	69.610	ENSPREG00000009926	ddx42	99	69.570	Poecilia_reticulata
ENSGALG00000000581	DDX42	100	79.352	ENSPPYG00000008531	DDX42	100	80.328	Pongo_abelii
ENSGALG00000000581	DDX42	92	77.009	ENSPCAG00000002474	DDX42	100	78.178	Procavia_capensis
ENSGALG00000000581	DDX42	100	72.421	ENSPCOG00000001559	DDX42	98	80.946	Propithecus_coquereli
ENSGALG00000000581	DDX42	100	80.498	ENSPVAG00000000160	DDX42	100	80.602	Pteropus_vampyrus
ENSGALG00000000581	DDX42	68	78.221	ENSPNYG00000013954	ddx42	97	69.420	Pundamilia_nyererei
ENSGALG00000000581	DDX42	80	77.506	ENSPNAG00000017352	ddx42	99	69.278	Pygocentrus_nattereri
ENSGALG00000000581	DDX42	100	82.128	ENSRNOG00000009474	Ddx42	100	81.921	Rattus_norvegicus
ENSGALG00000000581	DDX42	100	83.577	ENSRBIG00000004781	DDX42	95	92.814	Rhinopithecus_bieti
ENSGALG00000000581	DDX42	100	83.577	ENSRROG00000029794	DDX42	100	83.264	Rhinopithecus_roxellana
ENSGALG00000000581	DDX42	100	83.299	ENSSBOG00000029624	DDX42	97	87.972	Saimiri_boliviensis_boliviensis
ENSGALG00000000581	DDX42	71	55.491	ENSSHAG00000007919	-	99	55.058	Sarcophilus_harrisii
ENSGALG00000000581	DDX42	100	82.698	ENSSHAG00000012896	-	100	82.595	Sarcophilus_harrisii
ENSGALG00000000581	DDX42	80	81.866	ENSSFOG00015014064	ddx42	81	81.997	Scleropages_formosus
ENSGALG00000000581	DDX42	83	79.464	ENSSMAG00000009077	ddx42	99	70.791	Scophthalmus_maximus
ENSGALG00000000581	DDX42	99	70.324	ENSSDUG00000022221	ddx42	99	70.533	Seriola_dumerili
ENSGALG00000000581	DDX42	99	69.863	ENSSLDG00000018483	ddx42	99	69.758	Seriola_lalandi_dorsalis
ENSGALG00000000581	DDX42	100	81.603	ENSSARG00000009847	DDX42	100	82.848	Sorex_araneus
ENSGALG00000000581	DDX42	100	87.093	ENSSPUG00000018806	DDX42	100	86.779	Sphenodon_punctatus
ENSGALG00000000581	DDX42	83	80.076	ENSSPAG00000013055	ddx42	99	71.399	Stegastes_partitus
ENSGALG00000000581	DDX42	86	79.645	ENSSSCG00000017289	DDX42	97	81.655	Sus_scrofa
ENSGALG00000000581	DDX42	100	90.890	ENSTGUG00000001931	DDX42	100	90.890	Taeniopygia_guttata
ENSGALG00000000581	DDX42	99	69.013	ENSTRUG00000010711	ddx42	99	79.778	Takifugu_rubripes
ENSGALG00000000581	DDX42	81	89.093	ENSTBEG00000010159	DDX42	100	89.093	Tupaia_belangeri
ENSGALG00000000581	DDX42	100	82.213	ENSTTRG00000006962	DDX42	100	82.698	Tursiops_truncatus
ENSGALG00000000581	DDX42	100	82.238	ENSUAMG00000007321	DDX42	100	83.385	Ursus_americanus
ENSGALG00000000581	DDX42	100	82.968	ENSUMAG00000017438	DDX42	100	83.316	Ursus_maritimus
ENSGALG00000000581	DDX42	100	71.648	ENSVPAG00000009633	DDX42	100	73.624	Vicugna_pacos
ENSGALG00000000581	DDX42	100	81.818	ENSVVUG00000006095	DDX42	100	83.888	Vulpes_vulpes
ENSGALG00000000581	DDX42	100	76.215	ENSXETG00000003245	ddx42	100	75.413	Xenopus_tropicalis
ENSGALG00000000581	DDX42	85	71.020	ENSXCOG00000017560	ddx42	97	70.771	Xiphophorus_couchianus
ENSGALG00000000581	DDX42	100	71.263	ENSXMAG00000008138	ddx42	99	71.022	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0008104	protein localization	-	ISS	Process
GO:0042981	regulation of apoptotic process	-	ISS	Process