EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000000990 (Gene tree)
Gene ID: 419116
Gene Symbol: SRSF6
Alias: SFRS6
Full Name: Gallus gallus serine/arginine-rich splicing factor 6 (SRSF6)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 25930 bases
Position: chr20:97923-123852
Accession: NM_001030843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000048937	RRM_1	PF00076.22	8.7e-32	1	2
ENSGALP00000048937	RRM_1	PF00076.22	8.7e-32	2	2
ENSGALP00000068859	RRM_1	PF00076.22	2.3e-16	1	1
ENSGALP00000001460	RRM_1	PF00076.22	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000047622	-	2379	-	ENSGALP00000048937	351 (aa)	-	A0A1D5P892
ENSGALT00000001462	-	1410	-	ENSGALP00000001460	335 (aa)	-	E1C270
ENSGALT00000105979	-	949	-	ENSGALP00000068859	135 (aa)	-	-

Gene Model

Click here to download ENSGALG00000000990's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG
gga05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000000990's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000000990	SRSF6	100	97.037	ENSG00000124193	SRSF6	100	97.037	Homo_sapiens
ENSGALG00000000990	SRSF6	58	93.590	ENSAPOG00000016635	-	84	81.618	Acanthochromis_polyacanthus
ENSGALG00000000990	SRSF6	54	71.875	ENSAMEG00000003710	SRSF6	93	71.341	Ailuropoda_melanoleuca
ENSGALG00000000990	SRSF6	97	65.487	ENSACIG00000023658	-	56	88.587	Amphilophus_citrinellus
ENSGALG00000000990	SRSF6	94	64.438	ENSACIG00000020091	-	95	79.389	Amphilophus_citrinellus
ENSGALG00000000990	SRSF6	77	72.325	ENSAOCG00000004309	-	57	82.888	Amphiprion_ocellaris
ENSGALG00000000990	SRSF6	58	93.590	ENSAOCG00000019438	-	98	68.548	Amphiprion_ocellaris
ENSGALG00000000990	SRSF6	63	83.529	ENSAPEG00000020746	-	65	82.353	Amphiprion_percula
ENSGALG00000000990	SRSF6	98	59.441	ENSAPEG00000013086	-	53	88.235	Amphiprion_percula
ENSGALG00000000990	SRSF6	63	83.529	ENSATEG00000007255	-	71	81.183	Anabas_testudineus
ENSGALG00000000990	SRSF6	90	97.143	ENSAPLG00000014472	SRSF6	100	97.143	Anas_platyrhynchos
ENSGALG00000000990	SRSF6	94	84.848	ENSACAG00000002061	SRSF6	91	85.583	Anolis_carolinensis
ENSGALG00000000990	SRSF6	100	97.037	ENSANAG00000024080	SRSF6	100	97.037	Aotus_nancymaae
ENSGALG00000000990	SRSF6	54	89.041	ENSACLG00000024373	-	96	78.495	Astatotilapia_calliptera
ENSGALG00000000990	SRSF6	55	93.243	ENSAMXG00000003101	-	50	86.631	Astyanax_mexicanus
ENSGALG00000000990	SRSF6	55	91.892	ENSAMXG00000042692	-	96	82.222	Astyanax_mexicanus
ENSGALG00000000990	SRSF6	100	96.296	ENSBTAG00000008527	SRSF6	100	96.296	Bos_taurus
ENSGALG00000000990	SRSF6	100	97.037	ENSCJAG00000048403	SRSF6	100	97.037	Callithrix_jacchus
ENSGALG00000000990	SRSF6	100	96.296	ENSCAFG00000009289	SRSF6	100	96.296	Canis_familiaris
ENSGALG00000000990	SRSF6	100	96.296	ENSCAFG00020013559	SRSF6	100	96.296	Canis_lupus_dingo
ENSGALG00000000990	SRSF6	94	82.121	ENSCHIG00000009148	-	93	82.012	Capra_hircus
ENSGALG00000000990	SRSF6	100	96.296	ENSCHIG00000015890	-	100	96.296	Capra_hircus
ENSGALG00000000990	SRSF6	93	67.385	ENSTSYG00000026476	SRSF6	91	69.725	Carlito_syrichta
ENSGALG00000000990	SRSF6	100	97.037	ENSCPOG00000011761	SRSF6	100	97.037	Cavia_porcellus
ENSGALG00000000990	SRSF6	94	63.253	ENSCCAG00000018540	-	60	80.319	Cebus_capucinus
ENSGALG00000000990	SRSF6	100	97.037	ENSCCAG00000026018	-	100	97.037	Cebus_capucinus
ENSGALG00000000990	SRSF6	100	97.037	ENSCATG00000030794	SRSF6	100	97.037	Cercocebus_atys
ENSGALG00000000990	SRSF6	100	97.037	ENSCLAG00000010247	SRSF6	100	97.037	Chinchilla_lanigera
ENSGALG00000000990	SRSF6	94	83.636	ENSCSAG00000014022	SRSF6	93	82.209	Chlorocebus_sabaeus
ENSGALG00000000990	SRSF6	78	97.222	ENSCHOG00000000561	SRSF6	75	97.222	Choloepus_hoffmanni
ENSGALG00000000990	SRSF6	67	95.556	ENSCPBG00000018200	SRSF6	93	90.798	Chrysemys_picta_bellii
ENSGALG00000000990	SRSF6	94	67.879	ENSCANG00000042529	-	91	69.325	Colobus_angolensis_palliatus
ENSGALG00000000990	SRSF6	94	83.333	ENSCANG00000037774	-	93	81.902	Colobus_angolensis_palliatus
ENSGALG00000000990	SRSF6	100	95.556	ENSCGRG00001022339	Srsf6	100	95.556	Cricetulus_griseus_chok1gshd
ENSGALG00000000990	SRSF6	58	93.590	ENSCSEG00000019778	SRSF6	90	79.389	Cynoglossus_semilaevis
ENSGALG00000000990	SRSF6	58	91.026	ENSCVAG00000001863	SRSF6	95	82.443	Cyprinodon_variegatus
ENSGALG00000000990	SRSF6	55	90.541	ENSDARG00000016783	srsf6b	85	90.123	Danio_rerio
ENSGALG00000000990	SRSF6	94	83.735	ENSDNOG00000008410	SRSF6	92	82.317	Dasypus_novemcinctus
ENSGALG00000000990	SRSF6	100	97.037	ENSDORG00000028378	Srsf6	100	97.037	Dipodomys_ordii
ENSGALG00000000990	SRSF6	93	80.675	ENSETEG00000006221	SRSF6	53	88.770	Echinops_telfairi
ENSGALG00000000990	SRSF6	94	71.212	ENSEASG00005023429	SRSF6	53	89.840	Equus_asinus_asinus
ENSGALG00000000990	SRSF6	94	71.212	ENSECAG00000023932	SRSF6	56	89.840	Equus_caballus
ENSGALG00000000990	SRSF6	93	60.597	ENSELUG00000013506	SRSF6	71	88.750	Esox_lucius
ENSGALG00000000990	SRSF6	98	60.714	ENSELUG00000024182	SRSF6	90	81.452	Esox_lucius
ENSGALG00000000990	SRSF6	94	69.091	ENSFCAG00000032814	SRSF6	93	82.875	Felis_catus
ENSGALG00000000990	SRSF6	75	98.479	ENSFALG00000012776	SRSF6	99	98.479	Ficedula_albicollis
ENSGALG00000000990	SRSF6	94	67.169	ENSFDAG00000012191	SRSF6	92	68.902	Fukomys_damarensis
ENSGALG00000000990	SRSF6	90	66.984	ENSFHEG00000023065	srsf6a	54	87.166	Fundulus_heteroclitus
ENSGALG00000000990	SRSF6	61	78.313	ENSGMOG00000006105	srsf6a	62	71.585	Gadus_morhua
ENSGALG00000000990	SRSF6	56	90.789	ENSGMOG00000014458	srsf6a	51	79.688	Gadus_morhua
ENSGALG00000000990	SRSF6	58	94.872	ENSGAFG00000019088	-	72	81.746	Gambusia_affinis
ENSGALG00000000990	SRSF6	98	61.940	ENSGACG00000006084	srsf6a	53	83.957	Gasterosteus_aculeatus
ENSGALG00000000990	SRSF6	67	95.556	ENSGAGG00000003238	SRSF6	93	90.798	Gopherus_agassizii
ENSGALG00000000990	SRSF6	100	97.037	ENSGGOG00000009808	SRSF6	100	97.037	Gorilla_gorilla
ENSGALG00000000990	SRSF6	96	60.417	ENSHBUG00000006386	-	57	82.353	Haplochromis_burtoni
ENSGALG00000000990	SRSF6	100	97.037	ENSHGLG00000007348	SRSF6	100	97.037	Heterocephalus_glaber_female
ENSGALG00000000990	SRSF6	98	56.061	ENSHGLG00000007701	-	57	70.053	Heterocephalus_glaber_female
ENSGALG00000000990	SRSF6	94	67.470	ENSHGLG00100005043	SRSF6	92	69.207	Heterocephalus_glaber_male
ENSGALG00000000990	SRSF6	100	61.538	ENSHCOG00000002740	srsf6a	57	83.957	Hippocampus_comes
ENSGALG00000000990	SRSF6	58	92.308	ENSIPUG00000004776	-	71	77.619	Ictalurus_punctatus
ENSGALG00000000990	SRSF6	100	97.037	ENSSTOG00000010866	SRSF6	100	97.037	Ictidomys_tridecemlineatus
ENSGALG00000000990	SRSF6	54	93.151	ENSKMAG00000011934	srsf6a	59	84.492	Kryptolebias_marmoratus
ENSGALG00000000990	SRSF6	58	94.872	ENSLBEG00000007356	srsf6a	51	87.097	Labrus_bergylta
ENSGALG00000000990	SRSF6	93	81.040	ENSLACG00000005466	SRSF6	54	90.374	Latimeria_chalumnae
ENSGALG00000000990	SRSF6	100	97.037	ENSMFAG00000036925	SRSF6	100	97.037	Macaca_fascicularis
ENSGALG00000000990	SRSF6	100	97.037	ENSMMUG00000006742	SRSF6	100	97.037	Macaca_mulatta
ENSGALG00000000990	SRSF6	93	82.622	ENSMNEG00000038270	-	93	80.982	Macaca_nemestrina
ENSGALG00000000990	SRSF6	100	95.556	ENSMNEG00000027392	-	100	95.556	Macaca_nemestrina
ENSGALG00000000990	SRSF6	63	85.882	ENSMAMG00000023477	-	89	85.882	Mastacembelus_armatus
ENSGALG00000000990	SRSF6	98	59.441	ENSMAMG00000017161	srsf6a	53	87.701	Mastacembelus_armatus
ENSGALG00000000990	SRSF6	56	89.474	ENSMZEG00005008032	-	57	82.353	Maylandia_zebra
ENSGALG00000000990	SRSF6	98	59.091	ENSMZEG00005020658	-	60	81.622	Maylandia_zebra
ENSGALG00000000990	SRSF6	75	99.240	ENSMGAG00000000888	SRSF6	96	99.240	Meleagris_gallopavo
ENSGALG00000000990	SRSF6	100	95.556	ENSMAUG00000019086	-	100	95.556	Mesocricetus_auratus
ENSGALG00000000990	SRSF6	100	97.037	ENSMICG00000008537	SRSF6	100	97.037	Microcebus_murinus
ENSGALG00000000990	SRSF6	58	94.872	ENSMMOG00000015241	-	76	93.827	Mola_mola
ENSGALG00000000990	SRSF6	58	100.000	ENSMODG00000003107	SRSF6	100	79.772	Monodelphis_domestica
ENSGALG00000000990	SRSF6	100	95.556	MGP_CAROLIEiJ_G0024606	Srsf6	100	95.556	Mus_caroli
ENSGALG00000000990	SRSF6	100	95.556	ENSMUSG00000016921	Srsf6	100	95.556	Mus_musculus
ENSGALG00000000990	SRSF6	100	95.556	MGP_PahariEiJ_G0026050	Srsf6	100	95.556	Mus_pahari
ENSGALG00000000990	SRSF6	100	95.556	MGP_SPRETEiJ_G0025528	Srsf6	100	95.556	Mus_spretus
ENSGALG00000000990	SRSF6	58	96.154	ENSMPUG00000017692	SRSF6	64	89.840	Mustela_putorius_furo
ENSGALG00000000990	SRSF6	54	66.332	ENSMLUG00000016618	SRSF6	53	60.563	Myotis_lucifugus
ENSGALG00000000990	SRSF6	100	97.037	ENSNGAG00000017560	Srsf6	100	97.037	Nannospalax_galili
ENSGALG00000000990	SRSF6	56	89.474	ENSNBRG00000014709	-	57	82.353	Neolamprologus_brichardi
ENSGALG00000000990	SRSF6	98	59.441	ENSNBRG00000001846	-	52	87.701	Neolamprologus_brichardi
ENSGALG00000000990	SRSF6	100	97.037	ENSNLEG00000006524	SRSF6	100	97.037	Nomascus_leucogenys
ENSGALG00000000990	SRSF6	58	100.000	ENSMEUG00000014615	SRSF6	61	91.444	Notamacropus_eugenii
ENSGALG00000000990	SRSF6	100	97.037	ENSODEG00000016510	-	100	97.037	Octodon_degus
ENSGALG00000000990	SRSF6	90	72.468	ENSONIG00000001925	-	71	63.424	Oreochromis_niloticus
ENSGALG00000000990	SRSF6	61	86.585	ENSONIG00000020247	-	53	83.422	Oreochromis_niloticus
ENSGALG00000000990	SRSF6	98	41.216	ENSOCUG00000009785	-	63	73.196	Oryctolagus_cuniculus
ENSGALG00000000990	SRSF6	63	50.901	ENSOCUG00000023999	-	70	54.645	Oryctolagus_cuniculus
ENSGALG00000000990	SRSF6	58	94.872	ENSORLG00020017506	srsf6a	90	69.182	Oryzias_latipes_hni
ENSGALG00000000990	SRSF6	58	97.436	ENSOGAG00000014468	SRSF6	53	89.840	Otolemur_garnettii
ENSGALG00000000990	SRSF6	56	92.000	ENSOARG00000003117	SRSF6	93	79.268	Ovis_aries
ENSGALG00000000990	SRSF6	90	74.051	ENSPPAG00000043131	-	57	77.540	Pan_paniscus
ENSGALG00000000990	SRSF6	94	83.384	ENSPPAG00000034327	-	92	82.209	Pan_paniscus
ENSGALG00000000990	SRSF6	94	69.091	ENSPPRG00000008917	SRSF6	93	82.875	Panthera_pardus
ENSGALG00000000990	SRSF6	90	74.051	ENSPTRG00000046274	-	57	77.540	Pan_troglodytes
ENSGALG00000000990	SRSF6	100	97.037	ENSPTRG00000044686	-	100	97.037	Pan_troglodytes
ENSGALG00000000990	SRSF6	100	97.037	ENSPANG00000035224	SRSF6	100	97.037	Papio_anubis
ENSGALG00000000990	SRSF6	100	67.989	ENSPKIG00000018463	-	83	91.667	Paramormyrops_kingsleyae
ENSGALG00000000990	SRSF6	58	96.154	ENSPKIG00000015603	-	88	86.260	Paramormyrops_kingsleyae
ENSGALG00000000990	SRSF6	53	81.944	ENSPKIG00000015703	-	95	59.615	Paramormyrops_kingsleyae
ENSGALG00000000990	SRSF6	89	71.019	ENSPMGG00000014963	srsf6a	55	88.770	Periophthalmus_magnuspinnatus
ENSGALG00000000990	SRSF6	85	85.345	ENSPEMG00000022405	-	96	85.345	Peromyscus_maniculatus_bairdii
ENSGALG00000000990	SRSF6	100	98.519	ENSPCIG00000003820	SRSF6	100	98.519	Phascolarctos_cinereus
ENSGALG00000000990	SRSF6	58	94.872	ENSPFOG00000006437	srsf6a	50	85.714	Poecilia_formosa
ENSGALG00000000990	SRSF6	89	65.031	ENSPLAG00000009243	srsf6a	80	82.031	Poecilia_latipinna
ENSGALG00000000990	SRSF6	89	65.831	ENSPMEG00000006042	SRSF6	53	87.166	Poecilia_mexicana
ENSGALG00000000990	SRSF6	58	94.872	ENSPREG00000001040	srsf6a	87	83.206	Poecilia_reticulata
ENSGALG00000000990	SRSF6	94	83.686	ENSPPYG00000011019	SRSF6	92	82.515	Pongo_abelii
ENSGALG00000000990	SRSF6	58	98.718	ENSPCAG00000010954	SRSF6	55	90.909	Procavia_capensis
ENSGALG00000000990	SRSF6	100	97.037	ENSPCOG00000026364	SRSF6	100	97.037	Propithecus_coquereli
ENSGALG00000000990	SRSF6	94	83.030	ENSPVAG00000015232	SRSF6	93	81.595	Pteropus_vampyrus
ENSGALG00000000990	SRSF6	98	59.441	ENSPNYG00000011272	-	51	87.701	Pundamilia_nyererei
ENSGALG00000000990	SRSF6	56	89.474	ENSPNYG00000004944	-	57	82.353	Pundamilia_nyererei
ENSGALG00000000990	SRSF6	60	93.827	ENSPNAG00000023179	-	94	83.206	Pygocentrus_nattereri
ENSGALG00000000990	SRSF6	94	82.727	ENSRNOG00000006380	Srsf6	94	81.288	Rattus_norvegicus
ENSGALG00000000990	SRSF6	100	94.074	ENSRBIG00000041414	SRSF6	100	94.074	Rhinopithecus_bieti
ENSGALG00000000990	SRSF6	100	97.037	ENSRROG00000029989	SRSF6	100	97.037	Rhinopithecus_roxellana
ENSGALG00000000990	SRSF6	100	97.037	ENSSBOG00000033708	-	100	97.037	Saimiri_boliviensis_boliviensis
ENSGALG00000000990	SRSF6	93	61.963	ENSSBOG00000034078	-	54	71.892	Saimiri_boliviensis_boliviensis
ENSGALG00000000990	SRSF6	58	100.000	ENSSHAG00000012805	SRSF6	100	79.487	Sarcophilus_harrisii
ENSGALG00000000990	SRSF6	84	69.257	ENSSFOG00015015169	SRSF6	59	88.770	Scleropages_formosus
ENSGALG00000000990	SRSF6	93	64.986	ENSSFOG00015019681	-	53	82.564	Scleropages_formosus
ENSGALG00000000990	SRSF6	56	88.158	ENSSMAG00000017447	-	55	77.957	Scophthalmus_maximus
ENSGALG00000000990	SRSF6	59	92.500	ENSSMAG00000014861	-	94	67.164	Scophthalmus_maximus
ENSGALG00000000990	SRSF6	98	59.441	ENSSDUG00000016097	srsf6a	53	87.701	Seriola_dumerili
ENSGALG00000000990	SRSF6	65	81.818	ENSSDUG00000011036	-	96	81.818	Seriola_dumerili
ENSGALG00000000990	SRSF6	65	81.818	ENSSLDG00000014858	-	96	81.818	Seriola_lalandi_dorsalis
ENSGALG00000000990	SRSF6	98	59.441	ENSSLDG00000022841	srsf6a	53	87.701	Seriola_lalandi_dorsalis
ENSGALG00000000990	SRSF6	100	100.000	ENSSPUG00000004967	SRSF6	100	100.000	Sphenodon_punctatus
ENSGALG00000000990	SRSF6	98	59.441	ENSSPAG00000002362	srsf6a	66	85.106	Stegastes_partitus
ENSGALG00000000990	SRSF6	65	79.545	ENSSPAG00000021913	-	92	79.545	Stegastes_partitus
ENSGALG00000000990	SRSF6	94	82.424	ENSSSCG00000007362	SRSF6	93	82.012	Sus_scrofa
ENSGALG00000000990	SRSF6	100	98.291	ENSTGUG00000003455	SRSF6	100	98.291	Taeniopygia_guttata
ENSGALG00000000990	SRSF6	64	86.207	ENSTRUG00000021397	-	95	86.207	Takifugu_rubripes
ENSGALG00000000990	SRSF6	89	69.108	ENSTNIG00000001692	srsf6a	56	85.561	Tetraodon_nigroviridis
ENSGALG00000000990	SRSF6	85	77.517	ENSTBEG00000013448	SRSF6	91	76.792	Tupaia_belangeri
ENSGALG00000000990	SRSF6	100	96.296	ENSUAMG00000003559	SRSF6	100	96.296	Ursus_americanus
ENSGALG00000000990	SRSF6	74	96.296	ENSVPAG00000003016	SRSF6	73	96.296	Vicugna_pacos
ENSGALG00000000990	SRSF6	100	76.296	ENSVVUG00000019276	-	100	76.296	Vulpes_vulpes
ENSGALG00000000990	SRSF6	58	94.872	ENSXMAG00000021849	srsf6a	55	87.166	Xiphophorus_maculatus