EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000001310 (Gene tree)
Gene ID: 419597
Gene Symbol: -
Alias: FLJ20503|SECP43|TRSPAP1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 14893 bases
Position: chr23:2708287-2723179
Accession: 419597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000073879	RRM_1	PF00076.22	2.8e-25	1	2
ENSGALP00000073879	RRM_1	PF00076.22	2.8e-25	2	2
ENSGALP00000001992	RRM_1	PF00076.22	4.2e-25	1	2
ENSGALP00000001992	RRM_1	PF00076.22	4.2e-25	2	2
ENSGALP00000067873	RRM_1	PF00076.22	9.1e-23	1	2
ENSGALP00000067873	RRM_1	PF00076.22	9.1e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000094128	-	1538	-	ENSGALP00000073879	261 (aa)	-	-
ENSGALT00000104371	-	798	-	ENSGALP00000067873	265 (aa)	-	-
ENSGALT00000001994	-	864	-	ENSGALP00000001992	287 (aa)	XP_004947783	E1BZH5

Gene Model

Click here to download ENSGALG00000001310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000001310's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000001310	-	100	93.380	ENSG00000180098	TRNAU1AP	100	93.380	Homo_sapiens
ENSGALG00000001310	-	98	58.824	ENSAPOG00000007148	TRNAU1AP	98	57.756	Acanthochromis_polyacanthus
ENSGALG00000001310	-	100	93.031	ENSAMEG00000011367	TRNAU1AP	100	93.031	Ailuropoda_melanoleuca
ENSGALG00000001310	-	93	68.966	ENSACIG00000004161	trnau1apa	93	68.966	Amphilophus_citrinellus
ENSGALG00000001310	-	98	58.140	ENSAOCG00000008056	trnau1apa	98	59.136	Amphiprion_ocellaris
ENSGALG00000001310	-	98	58.140	ENSAPEG00000008868	trnau1apa	98	59.136	Amphiprion_percula
ENSGALG00000001310	-	98	57.235	ENSATEG00000012140	trnau1apa	98	56.592	Anabas_testudineus
ENSGALG00000001310	-	94	95.926	ENSAPLG00000002606	TRNAU1AP	99	95.926	Anas_platyrhynchos
ENSGALG00000001310	-	67	50.000	ENSACAG00000004205	-	73	50.000	Anolis_carolinensis
ENSGALG00000001310	-	99	76.923	ENSACAG00000003995	-	99	76.923	Anolis_carolinensis
ENSGALG00000001310	-	100	93.380	ENSANAG00000018976	TRNAU1AP	100	93.380	Aotus_nancymaae
ENSGALG00000001310	-	98	60.067	ENSACLG00000018515	trnau1apa	98	58.725	Astatotilapia_calliptera
ENSGALG00000001310	-	95	56.584	ENSAMXG00000013750	trnau1apa	90	56.318	Astyanax_mexicanus
ENSGALG00000001310	-	94	67.778	ENSAMXG00000029240	-	96	67.778	Astyanax_mexicanus
ENSGALG00000001310	-	100	93.031	ENSBTAG00000010393	TRNAU1AP	100	93.031	Bos_taurus
ENSGALG00000001310	-	100	93.380	ENSCJAG00000009717	TRNAU1AP	100	93.380	Callithrix_jacchus
ENSGALG00000001310	-	100	93.031	ENSCAFG00000011735	TRNAU1AP	100	93.031	Canis_familiaris
ENSGALG00000001310	-	100	93.031	ENSCAFG00020023584	TRNAU1AP	100	93.031	Canis_lupus_dingo
ENSGALG00000001310	-	100	93.031	ENSCHIG00000023215	TRNAU1AP	100	93.031	Capra_hircus
ENSGALG00000001310	-	100	93.031	ENSTSYG00000003506	TRNAU1AP	100	93.031	Carlito_syrichta
ENSGALG00000001310	-	100	93.031	ENSCPOG00000001925	TRNAU1AP	100	93.031	Cavia_porcellus
ENSGALG00000001310	-	100	93.380	ENSCCAG00000037506	TRNAU1AP	100	93.380	Cebus_capucinus
ENSGALG00000001310	-	100	93.031	ENSCATG00000044617	TRNAU1AP	100	93.031	Cercocebus_atys
ENSGALG00000001310	-	100	92.683	ENSCLAG00000008223	TRNAU1AP	100	92.683	Chinchilla_lanigera
ENSGALG00000001310	-	100	93.031	ENSCSAG00000001014	TRNAU1AP	100	93.031	Chlorocebus_sabaeus
ENSGALG00000001310	-	95	95.255	ENSCPBG00000000121	TRNAU1AP	100	95.255	Chrysemys_picta_bellii
ENSGALG00000001310	-	63	52.727	ENSCSAVG00000011781	-	87	52.727	Ciona_savignyi
ENSGALG00000001310	-	100	81.533	ENSCANG00000041949	TRNAU1AP	100	91.525	Colobus_angolensis_palliatus
ENSGALG00000001310	-	100	94.077	ENSCGRG00001004713	Trnau1ap	100	94.077	Cricetulus_griseus_chok1gshd
ENSGALG00000001310	-	100	94.077	ENSCGRG00000014532	Trnau1ap	100	94.077	Cricetulus_griseus_crigri
ENSGALG00000001310	-	98	56.667	ENSCSEG00000006663	trnau1apa	95	56.667	Cynoglossus_semilaevis
ENSGALG00000001310	-	97	56.997	ENSCVAG00000018069	trnau1apa	94	58.242	Cyprinodon_variegatus
ENSGALG00000001310	-	95	51.237	ENSDARG00000101323	trnau1apa	88	50.534	Danio_rerio
ENSGALG00000001310	-	74	74.479	ENSDNOG00000047959	-	93	78.333	Dasypus_novemcinctus
ENSGALG00000001310	-	100	93.031	ENSDNOG00000033009	TRNAU1AP	100	93.031	Dasypus_novemcinctus
ENSGALG00000001310	-	99	86.014	ENSDORG00000006349	Trnau1ap	100	94.372	Dipodomys_ordii
ENSGALG00000001310	-	96	37.730	FBgn0031607	CG15440	51	51.445	Drosophila_melanogaster
ENSGALG00000001310	-	85	88.980	ENSETEG00000012594	TRNAU1AP	100	88.980	Echinops_telfairi
ENSGALG00000001310	-	100	93.380	ENSEASG00005010062	TRNAU1AP	100	93.380	Equus_asinus_asinus
ENSGALG00000001310	-	100	93.380	ENSECAG00000012980	TRNAU1AP	100	93.380	Equus_caballus
ENSGALG00000001310	-	96	62.414	ENSELUG00000017686	trnau1apa	94	61.324	Esox_lucius
ENSGALG00000001310	-	96	70.526	ENSELUG00000022790	-	94	70.526	Esox_lucius
ENSGALG00000001310	-	100	93.380	ENSFCAG00000013401	TRNAU1AP	100	93.380	Felis_catus
ENSGALG00000001310	-	95	97.080	ENSFALG00000001371	TRNAU1AP	100	97.080	Ficedula_albicollis
ENSGALG00000001310	-	100	92.334	ENSFDAG00000018599	TRNAU1AP	100	92.334	Fukomys_damarensis
ENSGALG00000001310	-	87	59.274	ENSFHEG00000018232	trnau1apa	92	54.044	Fundulus_heteroclitus
ENSGALG00000001310	-	95	55.088	ENSGMOG00000016508	trnau1apa	93	54.417	Gadus_morhua
ENSGALG00000001310	-	68	47.887	ENSGALG00000012721	C2H6orf52	95	43.629	Gallus_gallus
ENSGALG00000001310	-	86	57.676	ENSGAFG00000004928	trnau1apa	98	55.212	Gambusia_affinis
ENSGALG00000001310	-	98	59.589	ENSGACG00000001443	trnau1apa	95	58.219	Gasterosteus_aculeatus
ENSGALG00000001310	-	95	95.620	ENSGAGG00000004940	TRNAU1AP	100	95.620	Gopherus_agassizii
ENSGALG00000001310	-	100	93.380	ENSGGOG00000003511	TRNAU1AP	100	93.380	Gorilla_gorilla
ENSGALG00000001310	-	98	59.076	ENSHBUG00000002510	trnau1apa	98	57.756	Haplochromis_burtoni
ENSGALG00000001310	-	100	91.986	ENSHGLG00000010380	TRNAU1AP	100	91.986	Heterocephalus_glaber_female
ENSGALG00000001310	-	100	89.547	ENSHGLG00100012699	TRNAU1AP	100	89.547	Heterocephalus_glaber_male
ENSGALG00000001310	-	99	56.954	ENSHCOG00000014770	trnau1apa	97	54.636	Hippocampus_comes
ENSGALG00000001310	-	100	93.380	ENSSTOG00000000079	TRNAU1AP	100	93.380	Ictidomys_tridecemlineatus
ENSGALG00000001310	-	100	94.077	ENSJJAG00000010128	Trnau1ap	100	94.077	Jaculus_jaculus
ENSGALG00000001310	-	95	60.208	ENSKMAG00000001230	trnau1apa	93	56.401	Kryptolebias_marmoratus
ENSGALG00000001310	-	95	60.884	ENSLBEG00000011683	trnau1apa	93	59.184	Labrus_bergylta
ENSGALG00000001310	-	99	71.228	ENSLACG00000005541	TRNAU1AP	99	71.228	Latimeria_chalumnae
ENSGALG00000001310	-	99	70.629	ENSLOCG00000004041	trnau1apa	99	68.881	Lepisosteus_oculatus
ENSGALG00000001310	-	100	93.380	ENSLAFG00000007628	TRNAU1AP	100	93.380	Loxodonta_africana
ENSGALG00000001310	-	100	93.031	ENSMFAG00000043751	TRNAU1AP	100	93.031	Macaca_fascicularis
ENSGALG00000001310	-	100	93.031	ENSMMUG00000006561	TRNAU1AP	100	93.031	Macaca_mulatta
ENSGALG00000001310	-	100	93.031	ENSMNEG00000044201	TRNAU1AP	100	93.031	Macaca_nemestrina
ENSGALG00000001310	-	100	93.031	ENSMLEG00000015649	TRNAU1AP	100	93.031	Mandrillus_leucophaeus
ENSGALG00000001310	-	98	57.966	ENSMAMG00000001247	trnau1apa	98	58.333	Mastacembelus_armatus
ENSGALG00000001310	-	98	60.067	ENSMZEG00005017722	trnau1apa	98	58.725	Maylandia_zebra
ENSGALG00000001310	-	97	98.561	ENSMGAG00000002105	TRNAU1AP	100	98.561	Meleagris_gallopavo
ENSGALG00000001310	-	100	93.031	ENSMICG00000008386	TRNAU1AP	100	93.031	Microcebus_murinus
ENSGALG00000001310	-	100	93.728	ENSMOCG00000011189	Trnau1ap	100	93.728	Microtus_ochrogaster
ENSGALG00000001310	-	95	57.721	ENSMMOG00000012107	trnau1apa	92	57.721	Mola_mola
ENSGALG00000001310	-	100	91.986	ENSMODG00000010927	TRNAU1AP	100	91.986	Monodelphis_domestica
ENSGALG00000001310	-	96	58.020	ENSMALG00000016778	trnau1apa	94	57.679	Monopterus_albus
ENSGALG00000001310	-	100	93.031	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	96.739	Mus_caroli
ENSGALG00000001310	-	100	93.031	ENSMUSG00000028898	Trnau1ap	100	96.739	Mus_musculus
ENSGALG00000001310	-	100	93.380	MGP_PahariEiJ_G0028896	Trnau1ap	100	96.739	Mus_pahari
ENSGALG00000001310	-	100	92.683	MGP_SPRETEiJ_G0027544	Trnau1ap	100	96.739	Mus_spretus
ENSGALG00000001310	-	100	93.380	ENSMPUG00000015511	TRNAU1AP	100	93.380	Mustela_putorius_furo
ENSGALG00000001310	-	100	93.031	ENSMLUG00000012586	TRNAU1AP	100	93.031	Myotis_lucifugus
ENSGALG00000001310	-	100	92.334	ENSNGAG00000015881	Trnau1ap	100	92.334	Nannospalax_galili
ENSGALG00000001310	-	99	55.973	ENSNBRG00000001758	trnau1apa	98	55.973	Neolamprologus_brichardi
ENSGALG00000001310	-	100	93.380	ENSNLEG00000009822	TRNAU1AP	100	93.380	Nomascus_leucogenys
ENSGALG00000001310	-	97	90.647	ENSMEUG00000006117	TRNAU1AP	100	90.647	Notamacropus_eugenii
ENSGALG00000001310	-	70	86.957	ENSOPRG00000007084	-	69	86.957	Ochotona_princeps
ENSGALG00000001310	-	100	92.683	ENSODEG00000002970	TRNAU1AP	100	92.683	Octodon_degus
ENSGALG00000001310	-	88	59.350	ENSONIG00000004715	trnau1apa	95	58.776	Oreochromis_niloticus
ENSGALG00000001310	-	99	72.378	ENSOANG00000005325	-	99	72.378	Ornithorhynchus_anatinus
ENSGALG00000001310	-	100	91.986	ENSOCUG00000011704	-	100	91.986	Oryctolagus_cuniculus
ENSGALG00000001310	-	93	74.380	ENSOCUG00000006834	-	99	70.356	Oryctolagus_cuniculus
ENSGALG00000001310	-	100	74.653	ENSOCUG00000002353	-	100	74.653	Oryctolagus_cuniculus
ENSGALG00000001310	-	98	57.651	ENSORLG00000010428	trnau1apa	95	56.429	Oryzias_latipes
ENSGALG00000001310	-	98	57.534	ENSORLG00020000926	trnau1ap	95	56.164	Oryzias_latipes_hni
ENSGALG00000001310	-	98	57.534	ENSORLG00015009858	trnau1ap	95	56.164	Oryzias_latipes_hsok
ENSGALG00000001310	-	98	57.877	ENSOMEG00000007873	trnau1apa	95	55.479	Oryzias_melastigma
ENSGALG00000001310	-	100	93.031	ENSOGAG00000002274	TRNAU1AP	100	93.031	Otolemur_garnettii
ENSGALG00000001310	-	100	93.031	ENSOARG00000002843	TRNAU1AP	100	93.031	Ovis_aries
ENSGALG00000001310	-	100	93.380	ENSPPAG00000033927	TRNAU1AP	100	93.380	Pan_paniscus
ENSGALG00000001310	-	100	93.380	ENSPPRG00000004416	TRNAU1AP	100	93.380	Panthera_pardus
ENSGALG00000001310	-	100	93.380	ENSPTIG00000016677	TRNAU1AP	100	93.380	Panthera_tigris_altaica
ENSGALG00000001310	-	93	76.753	ENSPTRG00000000434	-	97	76.384	Pan_troglodytes
ENSGALG00000001310	-	100	93.031	ENSPANG00000016019	TRNAU1AP	100	93.031	Papio_anubis
ENSGALG00000001310	-	95	59.011	ENSPKIG00000015511	trnau1apa	92	55.477	Paramormyrops_kingsleyae
ENSGALG00000001310	-	93	76.667	ENSPKIG00000022205	-	93	77.528	Paramormyrops_kingsleyae
ENSGALG00000001310	-	95	95.985	ENSPSIG00000006864	TRNAU1AP	100	95.985	Pelodiscus_sinensis
ENSGALG00000001310	-	94	60.294	ENSPMGG00000023893	trnau1apa	91	57.778	Periophthalmus_magnuspinnatus
ENSGALG00000001310	-	100	93.728	ENSPEMG00000007877	Trnau1ap	100	93.728	Peromyscus_maniculatus_bairdii
ENSGALG00000001310	-	67	60.112	ENSPMAG00000000592	trnau1apa	98	60.112	Petromyzon_marinus
ENSGALG00000001310	-	85	61.435	ENSPMAG00000005934	trnau1apa	96	59.908	Petromyzon_marinus
ENSGALG00000001310	-	95	56.357	ENSPFOG00000008100	trnau1apa	93	55.556	Poecilia_formosa
ENSGALG00000001310	-	91	56.071	ENSPLAG00000010236	trnau1apa	93	55.235	Poecilia_latipinna
ENSGALG00000001310	-	96	55.290	ENSPMEG00000016387	trnau1apa	92	54.483	Poecilia_mexicana
ENSGALG00000001310	-	93	54.135	ENSPREG00000019821	trnau1apa	86	63.095	Poecilia_reticulata
ENSGALG00000001310	-	100	72.822	ENSPPYG00000001639	-	100	80.620	Pongo_abelii
ENSGALG00000001310	-	100	93.031	ENSPCOG00000027712	-	100	93.031	Propithecus_coquereli
ENSGALG00000001310	-	98	75.801	ENSPCOG00000023470	-	100	75.801	Propithecus_coquereli
ENSGALG00000001310	-	100	93.380	ENSPVAG00000017214	TRNAU1AP	100	93.380	Pteropus_vampyrus
ENSGALG00000001310	-	98	59.076	ENSPNYG00000010130	trnau1apa	97	63.704	Pundamilia_nyererei
ENSGALG00000001310	-	99	52.349	ENSPNAG00000024905	trnau1apa	95	50.166	Pygocentrus_nattereri
ENSGALG00000001310	-	93	93.827	ENSRNOG00000055344	Trnau1ap	92	85.609	Rattus_norvegicus
ENSGALG00000001310	-	100	93.380	ENSRBIG00000029083	TRNAU1AP	100	93.380	Rhinopithecus_bieti
ENSGALG00000001310	-	100	93.380	ENSRROG00000029128	TRNAU1AP	100	93.380	Rhinopithecus_roxellana
ENSGALG00000001310	-	100	93.380	ENSSBOG00000021299	TRNAU1AP	100	93.380	Saimiri_boliviensis_boliviensis
ENSGALG00000001310	-	100	91.289	ENSSHAG00000008108	TRNAU1AP	100	91.289	Sarcophilus_harrisii
ENSGALG00000001310	-	98	54.426	ENSSMAG00000020851	trnau1apa	98	55.410	Scophthalmus_maximus
ENSGALG00000001310	-	96	57.912	ENSSDUG00000011734	trnau1apa	94	56.566	Seriola_dumerili
ENSGALG00000001310	-	96	45.455	ENSSLDG00000012101	trnau1apa	92	50.179	Seriola_lalandi_dorsalis
ENSGALG00000001310	-	97	92.446	ENSSARG00000007536	TRNAU1AP	100	92.446	Sorex_araneus
ENSGALG00000001310	-	99	86.364	ENSSPUG00000010400	-	100	86.364	Sphenodon_punctatus
ENSGALG00000001310	-	61	81.818	ENSSPUG00000010415	-	100	81.818	Sphenodon_punctatus
ENSGALG00000001310	-	98	57.705	ENSSPAG00000005029	trnau1apa	98	57.705	Stegastes_partitus
ENSGALG00000001310	-	100	93.380	ENSSSCG00000030284	TRNAU1AP	100	93.380	Sus_scrofa
ENSGALG00000001310	-	68	51.020	ENSTGUG00000005908	-	100	51.020	Taeniopygia_guttata
ENSGALG00000001310	-	97	97.482	ENSTGUG00000000735	-	100	97.482	Taeniopygia_guttata
ENSGALG00000001310	-	98	57.143	ENSTRUG00000003352	trnau1apa	98	55.814	Takifugu_rubripes
ENSGALG00000001310	-	99	54.902	ENSTNIG00000006129	trnau1apa	99	54.575	Tetraodon_nigroviridis
ENSGALG00000001310	-	85	83.673	ENSTBEG00000008049	-	100	83.673	Tupaia_belangeri
ENSGALG00000001310	-	100	93.031	ENSTTRG00000001854	TRNAU1AP	100	93.031	Tursiops_truncatus
ENSGALG00000001310	-	95	92.701	ENSUAMG00000008789	TRNAU1AP	100	92.701	Ursus_americanus
ENSGALG00000001310	-	100	93.031	ENSUMAG00000011068	TRNAU1AP	100	93.031	Ursus_maritimus
ENSGALG00000001310	-	100	83.562	ENSVPAG00000006778	TRNAU1AP	100	83.562	Vicugna_pacos
ENSGALG00000001310	-	99	91.197	ENSVVUG00000012518	TRNAU1AP	93	91.197	Vulpes_vulpes
ENSGALG00000001310	-	95	55.670	ENSXMAG00000017361	trnau1apa	93	55.903	Xiphophorus_maculatus