EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000001725 (Gene tree)
Gene ID: 417348
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 49387 bases
Position: chr18:4009885-4059271
Accession: 417348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000057802	Ago_hook	PF10427.9	3.9e-20	1	1
ENSGALP00000069964	Ago_hook	PF10427.9	5e-20	1	1
ENSGALP00000048771	Ago_hook	PF10427.9	1.8e-19	1	1
ENSGALP00000002643	Ago_hook	PF10427.9	1.9e-19	1	1
ENSGALP00000002643	RRM_1	PF00076.22	0.00021	1	1
ENSGALP00000048771	RRM_1	PF00076.22	0.00021	1	1
ENSGALP00000057802	RRM_1	PF00076.22	0.00021	1	1
ENSGALP00000069964	RRM_1	PF00076.22	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000057680	TNRC6C-201	5576	XM_015295279	ENSGALP00000057802	1677 (aa)	XP_015150765	A0A1D5PXV4
ENSGALT00000101059	TNRC6C-204	5610	XM_015295276	ENSGALP00000069964	1797 (aa)	XP_015150762	-
ENSGALT00000066939	TNRC6C-202	5543	-	ENSGALP00000048771	1666 (aa)	-	A0A1D5P7S9
ENSGALT00000002646	TNRC6C-203	5456	-	ENSGALP00000002643	1637 (aa)	-	F1NI60

Gene Model

Click here to download ENSGALG00000001725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000001725's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000001725	TNRC6C	100	88.527	ENSG00000078687	TNRC6C	100	90.526	Homo_sapiens
ENSGALG00000001725	TNRC6C	80	56.156	ENSAPOG00000019749	tnrc6c1	100	49.202	Acanthochromis_polyacanthus
ENSGALG00000001725	TNRC6C	99	86.670	ENSAMEG00000013756	TNRC6C	99	86.670	Ailuropoda_melanoleuca
ENSGALG00000001725	TNRC6C	94	54.138	ENSACIG00000008075	tnrc6c1	95	56.450	Amphilophus_citrinellus
ENSGALG00000001725	TNRC6C	78	69.071	ENSAOCG00000023968	tnrc6c1	100	50.462	Amphiprion_ocellaris
ENSGALG00000001725	TNRC6C	80	56.912	ENSAPEG00000009020	tnrc6c1	100	50.411	Amphiprion_percula
ENSGALG00000001725	TNRC6C	99	95.854	ENSAPLG00000005456	TNRC6C	94	95.854	Anas_platyrhynchos
ENSGALG00000001725	TNRC6C	99	93.252	ENSACAG00000016198	TNRC6C	92	92.973	Anolis_carolinensis
ENSGALG00000001725	TNRC6C	100	87.988	ENSANAG00000021554	TNRC6C	100	88.225	Aotus_nancymaae
ENSGALG00000001725	TNRC6C	100	49.750	ENSACLG00000000424	tnrc6c1	96	55.532	Astatotilapia_calliptera
ENSGALG00000001725	TNRC6C	96	89.327	ENSBTAG00000018658	TNRC6C	100	85.486	Bos_taurus
ENSGALG00000001725	TNRC6C	100	87.811	ENSCJAG00000019431	TNRC6C	100	87.988	Callithrix_jacchus
ENSGALG00000001725	TNRC6C	99	88.007	ENSCAFG00000005224	TNRC6C	93	87.951	Canis_familiaris
ENSGALG00000001725	TNRC6C	100	87.662	ENSCAFG00020006661	TNRC6C	100	86.951	Canis_lupus_dingo
ENSGALG00000001725	TNRC6C	100	84.510	ENSCHIG00000026004	TNRC6C	100	84.409	Capra_hircus
ENSGALG00000001725	TNRC6C	100	87.072	ENSTSYG00000005403	TNRC6C	100	89.449	Carlito_syrichta
ENSGALG00000001725	TNRC6C	100	81.014	ENSCAPG00000007307	TNRC6C	93	79.215	Cavia_aperea
ENSGALG00000001725	TNRC6C	100	86.121	ENSCPOG00000000467	TNRC6C	100	84.507	Cavia_porcellus
ENSGALG00000001725	TNRC6C	100	88.284	ENSCCAG00000030524	TNRC6C	100	88.760	Cebus_capucinus
ENSGALG00000001725	TNRC6C	100	88.462	ENSCATG00000033135	TNRC6C	100	88.934	Cercocebus_atys
ENSGALG00000001725	TNRC6C	100	88.316	ENSCLAG00000011139	TNRC6C	93	86.063	Chinchilla_lanigera
ENSGALG00000001725	TNRC6C	99	88.901	ENSCSAG00000005167	TNRC6C	93	89.068	Chlorocebus_sabaeus
ENSGALG00000001725	TNRC6C	75	89.952	ENSCHOG00000000088	TNRC6C	72	90.821	Choloepus_hoffmanni
ENSGALG00000001725	TNRC6C	100	94.943	ENSCPBG00000027960	TNRC6C	100	95.006	Chrysemys_picta_bellii
ENSGALG00000001725	TNRC6C	100	88.166	ENSCANG00000041771	TNRC6C	100	88.644	Colobus_angolensis_palliatus
ENSGALG00000001725	TNRC6C	100	85.192	ENSCGRG00001022686	Tnrc6c	100	84.661	Cricetulus_griseus_chok1gshd
ENSGALG00000001725	TNRC6C	100	85.596	ENSCGRG00000018041	Tnrc6c	100	84.661	Cricetulus_griseus_crigri
ENSGALG00000001725	TNRC6C	100	49.750	ENSCSEG00000012744	tnrc6c1	95	47.905	Cynoglossus_semilaevis
ENSGALG00000001725	TNRC6C	99	52.883	ENSDARG00000076847	tnrc6c1	99	55.385	Danio_rerio
ENSGALG00000001725	TNRC6C	100	87.657	ENSDNOG00000003247	TNRC6C	95	88.199	Dasypus_novemcinctus
ENSGALG00000001725	TNRC6C	100	82.586	ENSDORG00000004558	Tnrc6c	100	82.409	Dipodomys_ordii
ENSGALG00000001725	TNRC6C	89	79.878	ENSETEG00000005527	TNRC6C	90	77.422	Echinops_telfairi
ENSGALG00000001725	TNRC6C	100	87.715	ENSEASG00005004799	TNRC6C	100	87.774	Equus_asinus_asinus
ENSGALG00000001725	TNRC6C	100	87.715	ENSECAG00000012486	TNRC6C	94	87.389	Equus_caballus
ENSGALG00000001725	TNRC6C	96	86.506	ENSEEUG00000010008	TNRC6C	96	87.140	Erinaceus_europaeus
ENSGALG00000001725	TNRC6C	100	86.517	ENSFCAG00000028358	TNRC6C	100	86.339	Felis_catus
ENSGALG00000001725	TNRC6C	100	93.273	ENSFALG00000000848	TNRC6C	100	95.496	Ficedula_albicollis
ENSGALG00000001725	TNRC6C	100	87.663	ENSFDAG00000010368	TNRC6C	100	86.141	Fukomys_damarensis
ENSGALG00000001725	TNRC6C	80	56.713	ENSFHEG00000002936	tnrc6c1	100	49.306	Fundulus_heteroclitus
ENSGALG00000001725	TNRC6C	100	51.980	ENSGAFG00000019019	tnrc6c1	100	48.813	Gambusia_affinis
ENSGALG00000001725	TNRC6C	77	55.792	ENSGACG00000012320	tnrc6c1	71	55.857	Gasterosteus_aculeatus
ENSGALG00000001725	TNRC6C	100	94.415	ENSGAGG00000022043	TNRC6C	100	94.398	Gopherus_agassizii
ENSGALG00000001725	TNRC6C	100	87.936	ENSGGOG00000011304	TNRC6C	100	88.361	Gorilla_gorilla
ENSGALG00000001725	TNRC6C	100	49.551	ENSHBUG00000010846	tnrc6c1	96	56.148	Haplochromis_burtoni
ENSGALG00000001725	TNRC6C	100	88.019	ENSHGLG00000004809	TNRC6C	93	85.952	Heterocephalus_glaber_female
ENSGALG00000001725	TNRC6C	100	87.360	ENSHGLG00100012597	TNRC6C	93	85.343	Heterocephalus_glaber_male
ENSGALG00000001725	TNRC6C	100	54.377	ENSIPUG00000000818	tnrc6c1	94	52.584	Ictalurus_punctatus
ENSGALG00000001725	TNRC6C	100	86.730	ENSSTOG00000009101	TNRC6C	100	85.256	Ictidomys_tridecemlineatus
ENSGALG00000001725	TNRC6C	100	84.838	ENSJJAG00000017055	Tnrc6c	93	82.044	Jaculus_jaculus
ENSGALG00000001725	TNRC6C	77	57.344	ENSKMAG00000021023	tnrc6c1	97	52.241	Kryptolebias_marmoratus
ENSGALG00000001725	TNRC6C	100	78.576	ENSLACG00000015283	TNRC6C	100	76.161	Latimeria_chalumnae
ENSGALG00000001725	TNRC6C	99	58.399	ENSLOCG00000013377	tnrc6c1	83	78.346	Lepisosteus_oculatus
ENSGALG00000001725	TNRC6C	100	87.751	ENSLAFG00000011122	TNRC6C	99	83.582	Loxodonta_africana
ENSGALG00000001725	TNRC6C	100	88.521	ENSMFAG00000043943	TNRC6C	100	88.992	Macaca_fascicularis
ENSGALG00000001725	TNRC6C	100	88.521	ENSMMUG00000011924	TNRC6C	100	88.698	Macaca_mulatta
ENSGALG00000001725	TNRC6C	100	88.521	ENSMNEG00000030405	TNRC6C	100	88.698	Macaca_nemestrina
ENSGALG00000001725	TNRC6C	100	88.521	ENSMLEG00000033436	TNRC6C	100	88.992	Mandrillus_leucophaeus
ENSGALG00000001725	TNRC6C	94	57.112	ENSMAMG00000023613	tnrc6c1	100	52.740	Mastacembelus_armatus
ENSGALG00000001725	TNRC6C	100	49.750	ENSMZEG00005010920	tnrc6c1	96	55.532	Maylandia_zebra
ENSGALG00000001725	TNRC6C	99	89.663	ENSMGAG00000003906	TNRC6C	94	89.663	Meleagris_gallopavo
ENSGALG00000001725	TNRC6C	100	85.605	ENSMAUG00000021618	Tnrc6c	100	85.723	Mesocricetus_auratus
ENSGALG00000001725	TNRC6C	100	88.869	ENSMICG00000003952	TNRC6C	100	88.986	Microcebus_murinus
ENSGALG00000001725	TNRC6C	100	87.255	ENSMOCG00000015879	Tnrc6c	100	85.304	Microtus_ochrogaster
ENSGALG00000001725	TNRC6C	77	57.352	ENSMMOG00000005203	tnrc6c1	97	52.364	Mola_mola
ENSGALG00000001725	TNRC6C	100	88.745	ENSMODG00000001785	TNRC6C	93	85.927	Monodelphis_domestica
ENSGALG00000001725	TNRC6C	100	86.663	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	84.741	Mus_caroli
ENSGALG00000001725	TNRC6C	100	86.307	ENSMUSG00000025571	Tnrc6c	100	84.403	Mus_musculus
ENSGALG00000001725	TNRC6C	100	86.603	MGP_PahariEiJ_G0018593	Tnrc6c	100	84.741	Mus_pahari
ENSGALG00000001725	TNRC6C	100	86.366	MGP_SPRETEiJ_G0018309	Tnrc6c	100	84.459	Mus_spretus
ENSGALG00000001725	TNRC6C	99	85.436	ENSMPUG00000013348	TNRC6C	92	85.436	Mustela_putorius_furo
ENSGALG00000001725	TNRC6C	100	79.388	ENSMLUG00000014431	TNRC6C	92	79.219	Myotis_lucifugus
ENSGALG00000001725	TNRC6C	100	85.950	ENSNGAG00000012203	Tnrc6c	93	84.135	Nannospalax_galili
ENSGALG00000001725	TNRC6C	100	50.533	ENSNBRG00000005344	tnrc6c1	96	55.666	Neolamprologus_brichardi
ENSGALG00000001725	TNRC6C	99	86.298	ENSNLEG00000000047	TNRC6C	93	86.298	Nomascus_leucogenys
ENSGALG00000001725	TNRC6C	97	82.959	ENSMEUG00000005104	TNRC6C	100	81.243	Notamacropus_eugenii
ENSGALG00000001725	TNRC6C	100	87.841	ENSODEG00000012499	TNRC6C	100	88.434	Octodon_degus
ENSGALG00000001725	TNRC6C	94	52.526	ENSONIG00000002210	tnrc6c1	95	54.968	Oreochromis_niloticus
ENSGALG00000001725	TNRC6C	99	65.261	ENSOANG00000009758	-	95	61.827	Ornithorhynchus_anatinus
ENSGALG00000001725	TNRC6C	100	49.301	ENSORLG00000009837	tnrc6c1	100	70.149	Oryzias_latipes
ENSGALG00000001725	TNRC6C	100	50.056	ENSORLG00020016510	tnrc6c1	100	50.530	Oryzias_latipes_hni
ENSGALG00000001725	TNRC6C	80	44.044	ENSORLG00015000171	tnrc6c1	98	46.033	Oryzias_latipes_hsok
ENSGALG00000001725	TNRC6C	100	48.372	ENSOMEG00000000357	tnrc6c1	100	48.866	Oryzias_melastigma
ENSGALG00000001725	TNRC6C	100	84.986	ENSOGAG00000007197	TNRC6C	100	87.188	Otolemur_garnettii
ENSGALG00000001725	TNRC6C	96	81.323	ENSOARG00000006041	TNRC6C	91	81.729	Ovis_aries
ENSGALG00000001725	TNRC6C	100	88.402	ENSPPAG00000027160	TNRC6C	100	88.876	Pan_paniscus
ENSGALG00000001725	TNRC6C	100	86.576	ENSPPRG00000018881	TNRC6C	100	86.399	Panthera_pardus
ENSGALG00000001725	TNRC6C	91	85.153	ENSPTIG00000008791	TNRC6C	70	72.583	Panthera_tigris_altaica
ENSGALG00000001725	TNRC6C	100	88.402	ENSPTRG00000009699	TNRC6C	100	88.876	Pan_troglodytes
ENSGALG00000001725	TNRC6C	100	88.678	ENSPANG00000019994	TNRC6C	100	88.856	Papio_anubis
ENSGALG00000001725	TNRC6C	96	52.741	ENSPKIG00000005428	tnrc6c1	98	53.318	Paramormyrops_kingsleyae
ENSGALG00000001725	TNRC6C	100	92.285	ENSPSIG00000018069	TNRC6C	100	90.304	Pelodiscus_sinensis
ENSGALG00000001725	TNRC6C	76	59.534	ENSPMGG00000022911	tnrc6c1	97	64.634	Periophthalmus_magnuspinnatus
ENSGALG00000001725	TNRC6C	100	86.254	ENSPEMG00000009785	Tnrc6c	100	84.248	Peromyscus_maniculatus_bairdii
ENSGALG00000001725	TNRC6C	59	86.523	ENSPCIG00000017421	-	99	86.831	Phascolarctos_cinereus
ENSGALG00000001725	TNRC6C	100	51.616	ENSPFOG00000012560	tnrc6c1	96	61.798	Poecilia_formosa
ENSGALG00000001725	TNRC6C	97	52.760	ENSPLAG00000021055	tnrc6c1	97	52.378	Poecilia_latipinna
ENSGALG00000001725	TNRC6C	99	89.068	ENSPPYG00000008679	TNRC6C	92	89.234	Pongo_abelii
ENSGALG00000001725	TNRC6C	95	91.469	ENSPCAG00000012510	TNRC6C	91	91.469	Procavia_capensis
ENSGALG00000001725	TNRC6C	100	88.817	ENSPCOG00000021451	TNRC6C	100	89.282	Propithecus_coquereli
ENSGALG00000001725	TNRC6C	96	87.288	ENSPVAG00000002008	TNRC6C	95	87.288	Pteropus_vampyrus
ENSGALG00000001725	TNRC6C	100	50.623	ENSPNYG00000014477	tnrc6c1	96	55.085	Pundamilia_nyererei
ENSGALG00000001725	TNRC6C	100	85.968	ENSRNOG00000022395	Tnrc6c	100	86.264	Rattus_norvegicus
ENSGALG00000001725	TNRC6C	100	88.521	ENSRBIG00000027777	TNRC6C	100	88.992	Rhinopithecus_bieti
ENSGALG00000001725	TNRC6C	100	88.580	ENSRROG00000042912	TNRC6C	100	89.050	Rhinopithecus_roxellana
ENSGALG00000001725	TNRC6C	99	87.845	ENSSBOG00000023981	TNRC6C	100	88.239	Saimiri_boliviensis_boliviensis
ENSGALG00000001725	TNRC6C	51	93.506	ENSSHAG00000018330	-	100	92.749	Sarcophilus_harrisii
ENSGALG00000001725	TNRC6C	74	58.960	ENSSFOG00015004735	-	99	62.304	Scleropages_formosus
ENSGALG00000001725	TNRC6C	77	60.995	ENSSFOG00015006475	tnrc6c1	96	52.568	Scleropages_formosus
ENSGALG00000001725	TNRC6C	100	49.333	ENSSMAG00000012761	tnrc6c1	99	51.656	Scophthalmus_maximus
ENSGALG00000001725	TNRC6C	97	52.243	ENSSDUG00000002366	tnrc6c1	99	50.397	Seriola_dumerili
ENSGALG00000001725	TNRC6C	97	50.780	ENSSLDG00000025613	tnrc6c1	97	51.643	Seriola_lalandi_dorsalis
ENSGALG00000001725	TNRC6C	91	87.500	ENSSARG00000006816	TNRC6C	91	86.555	Sorex_araneus
ENSGALG00000001725	TNRC6C	82	90.154	ENSSPUG00000007341	TNRC6C	91	92.668	Sphenodon_punctatus
ENSGALG00000001725	TNRC6C	78	57.031	ENSSPAG00000014977	tnrc6c1	97	49.713	Stegastes_partitus
ENSGALG00000001725	TNRC6C	100	81.732	ENSSSCG00000034373	TNRC6C	100	88.943	Sus_scrofa
ENSGALG00000001725	TNRC6C	100	97.151	ENSTGUG00000007733	TNRC6C	100	95.096	Taeniopygia_guttata
ENSGALG00000001725	TNRC6C	78	56.034	ENSTRUG00000011685	tnrc6c1	100	50.816	Takifugu_rubripes
ENSGALG00000001725	TNRC6C	99	54.077	ENSTNIG00000005273	tnrc6c1	100	62.414	Tetraodon_nigroviridis
ENSGALG00000001725	TNRC6C	64	88.281	ENSTBEG00000005046	TNRC6C	95	88.281	Tupaia_belangeri
ENSGALG00000001725	TNRC6C	100	87.271	ENSTTRG00000010828	TNRC6C	99	85.208	Tursiops_truncatus
ENSGALG00000001725	TNRC6C	100	85.436	ENSUMAG00000013614	TNRC6C	94	85.754	Ursus_maritimus
ENSGALG00000001725	TNRC6C	52	78.032	ENSVPAG00000006765	-	99	77.906	Vicugna_pacos
ENSGALG00000001725	TNRC6C	100	88.078	ENSVVUG00000015268	TNRC6C	100	88.019	Vulpes_vulpes
ENSGALG00000001725	TNRC6C	100	77.529	ENSXETG00000019470	tnrc6c	100	77.412	Xenopus_tropicalis
ENSGALG00000001725	TNRC6C	100	51.354	ENSXMAG00000025971	tnrc6c1	100	48.813	Xiphophorus_maculatus