EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000001948 (Gene tree)
Gene ID: 427046
Gene Symbol: -
Alias: -
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 13181 bases
Position: chr28:1454529-1467709
Accession: 427046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000003011	RRM_5	PF13893.6	1.2e-07	1	1
ENSGALP00000003011	RRM_1	PF00076.22	4.1e-14	1	1
ENSGALP00000003011	SAP	PF02037.27	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000003015	-	2883	XM_004948730	ENSGALP00000003011	960 (aa)	XP_004948787	H9KZ12

Gene Model

Click here to download ENSGALG00000001948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000001948's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000001948	-	97	63.472	ENSG00000160633	SAFB	100	62.055	Homo_sapiens
ENSGALG00000001948	-	91	48.111	ENSAPOG00000022508	safb	65	42.550	Acanthochromis_polyacanthus
ENSGALG00000001948	-	94	45.851	ENSACIG00000006247	safb	70	42.924	Amphilophus_citrinellus
ENSGALG00000001948	-	93	47.271	ENSAOCG00000006308	safb	67	43.492	Amphiprion_ocellaris
ENSGALG00000001948	-	90	48.543	ENSAPEG00000023342	safb	64	43.879	Amphiprion_percula
ENSGALG00000001948	-	97	46.751	ENSATEG00000004998	safb	64	44.356	Anabas_testudineus
ENSGALG00000001948	-	90	85.928	ENSAPLG00000006355	-	100	85.928	Anas_platyrhynchos
ENSGALG00000001948	-	94	73.230	ENSAPLG00000005780	-	100	73.230	Anas_platyrhynchos
ENSGALG00000001948	-	79	59.391	ENSACAG00000016893	-	74	55.132	Anolis_carolinensis
ENSGALG00000001948	-	97	63.152	ENSANAG00000028821	SAFB	100	61.528	Aotus_nancymaae
ENSGALG00000001948	-	90	50.000	ENSAMXG00000018154	safb	62	46.080	Astyanax_mexicanus
ENSGALG00000001948	-	82	66.261	ENSCJAG00000017081	SAFB	99	65.653	Callithrix_jacchus
ENSGALG00000001948	-	97	63.298	ENSCAFG00000018803	SAFB	87	61.427	Canis_familiaris
ENSGALG00000001948	-	97	63.298	ENSCAFG00020018943	SAFB	100	61.427	Canis_lupus_dingo
ENSGALG00000001948	-	97	62.513	ENSCHIG00000007262	SAFB	94	60.488	Capra_hircus
ENSGALG00000001948	-	81	59.406	ENSCAPG00000012121	SAFB	97	59.406	Cavia_aperea
ENSGALG00000001948	-	97	63.259	ENSCCAG00000020193	SAFB	100	61.660	Cebus_capucinus
ENSGALG00000001948	-	97	63.259	ENSCATG00000029994	SAFB	100	61.924	Cercocebus_atys
ENSGALG00000001948	-	100	61.179	ENSCLAG00000007734	SAFB	100	60.671	Chinchilla_lanigera
ENSGALG00000001948	-	97	63.152	ENSCSAG00000009949	SAFB	100	60.559	Chlorocebus_sabaeus
ENSGALG00000001948	-	82	55.569	ENSCHOG00000003208	SAFB	88	55.056	Choloepus_hoffmanni
ENSGALG00000001948	-	92	72.022	ENSCPBG00000010928	-	100	71.236	Chrysemys_picta_bellii
ENSGALG00000001948	-	92	82.280	ENSCPBG00000010936	-	100	82.280	Chrysemys_picta_bellii
ENSGALG00000001948	-	93	66.176	ENSCANG00000004774	-	99	66.176	Colobus_angolensis_palliatus
ENSGALG00000001948	-	94	43.516	ENSCSEG00000019870	safb	65	40.128	Cynoglossus_semilaevis
ENSGALG00000001948	-	96	47.619	ENSDARG00000020467	safb	73	56.757	Danio_rerio
ENSGALG00000001948	-	97	63.231	ENSDNOG00000015746	SAFB	95	58.689	Dasypus_novemcinctus
ENSGALG00000001948	-	64	59.370	ENSDORG00000016200	Safb	68	54.955	Dipodomys_ordii
ENSGALG00000001948	-	65	67.580	ENSETEG00000018679	SAFB	71	61.947	Echinops_telfairi
ENSGALG00000001948	-	97	61.082	ENSEASG00005023019	SAFB	100	58.684	Equus_asinus_asinus
ENSGALG00000001948	-	97	63.046	ENSECAG00000018659	SAFB	89	60.766	Equus_caballus
ENSGALG00000001948	-	98	46.715	ENSELUG00000022327	safb	78	57.664	Esox_lucius
ENSGALG00000001948	-	97	63.511	ENSFCAG00000011835	SAFB	100	61.013	Felis_catus
ENSGALG00000001948	-	91	85.341	ENSFALG00000013881	-	100	84.773	Ficedula_albicollis
ENSGALG00000001948	-	100	73.368	ENSFALG00000013882	-	92	72.642	Ficedula_albicollis
ENSGALG00000001948	-	96	59.606	ENSFDAG00000020306	SAFB	99	59.606	Fukomys_damarensis
ENSGALG00000001948	-	75	59.167	ENSFHEG00000004219	safb	51	59.167	Fundulus_heteroclitus
ENSGALG00000001948	-	97	43.337	ENSGMOG00000014280	safb	63	42.072	Gadus_morhua
ENSGALG00000001948	-	100	76.037	ENSGALG00000013365	-	100	73.814	Gallus_gallus
ENSGALG00000001948	-	83	49.002	ENSGAFG00000016162	safb	58	49.383	Gambusia_affinis
ENSGALG00000001948	-	96	46.421	ENSGACG00000011385	safb	64	43.131	Gasterosteus_aculeatus
ENSGALG00000001948	-	71	68.841	ENSGAGG00000017702	-	100	68.696	Gopherus_agassizii
ENSGALG00000001948	-	96	83.931	ENSGAGG00000008424	-	100	83.931	Gopherus_agassizii
ENSGALG00000001948	-	97	63.578	ENSGGOG00000015109	SAFB	100	62.187	Gorilla_gorilla
ENSGALG00000001948	-	97	43.053	ENSHBUG00000009218	safb	50	52.665	Haplochromis_burtoni
ENSGALG00000001948	-	88	65.686	ENSHGLG00100004228	SAFB	99	62.844	Heterocephalus_glaber_male
ENSGALG00000001948	-	86	43.765	ENSHCOG00000001705	safb	64	38.280	Hippocampus_comes
ENSGALG00000001948	-	74	59.545	ENSIPUG00000024869	safb2	64	45.382	Ictalurus_punctatus
ENSGALG00000001948	-	100	59.394	ENSJJAG00000009021	Safb	100	57.932	Jaculus_jaculus
ENSGALG00000001948	-	90	47.630	ENSKMAG00000022308	safb	64	43.429	Kryptolebias_marmoratus
ENSGALG00000001948	-	97	46.736	ENSLBEG00000006015	safb	63	44.462	Labrus_bergylta
ENSGALG00000001948	-	97	56.468	ENSLACG00000018090	SAFB	99	54.527	Latimeria_chalumnae
ENSGALG00000001948	-	97	51.933	ENSLOCG00000003613	safb	73	49.048	Lepisosteus_oculatus
ENSGALG00000001948	-	97	62.778	ENSLAFG00000003840	SAFB	99	61.418	Loxodonta_africana
ENSGALG00000001948	-	97	63.259	ENSMFAG00000003885	SAFB	100	61.924	Macaca_fascicularis
ENSGALG00000001948	-	97	63.259	ENSMMUG00000017970	SAFB	100	61.924	Macaca_mulatta
ENSGALG00000001948	-	97	60.596	ENSMNEG00000035637	SAFB	99	60.768	Macaca_nemestrina
ENSGALG00000001948	-	97	59.638	ENSMLEG00000038637	SAFB	100	56.531	Mandrillus_leucophaeus
ENSGALG00000001948	-	97	47.550	ENSMAMG00000003357	safb	62	42.576	Mastacembelus_armatus
ENSGALG00000001948	-	90	49.158	ENSMZEG00005009120	safb	64	45.079	Maylandia_zebra
ENSGALG00000001948	-	89	84.162	ENSMGAG00000001051	-	99	84.284	Meleagris_gallopavo
ENSGALG00000001948	-	97	73.448	ENSMGAG00000001101	-	97	72.777	Meleagris_gallopavo
ENSGALG00000001948	-	100	61.594	ENSMICG00000008739	-	100	61.924	Microcebus_murinus
ENSGALG00000001948	-	85	54.237	ENSMICG00000046795	-	98	62.105	Microcebus_murinus
ENSGALG00000001948	-	100	63.272	ENSMODG00000001236	SAFB	100	62.602	Monodelphis_domestica
ENSGALG00000001948	-	93	47.991	ENSMALG00000020330	safb	68	41.956	Monopterus_albus
ENSGALG00000001948	-	97	59.232	MGP_PahariEiJ_G0020769	Safb	100	57.417	Mus_pahari
ENSGALG00000001948	-	100	62.254	ENSMPUG00000006123	SAFB	94	61.220	Mustela_putorius_furo
ENSGALG00000001948	-	97	64.255	ENSMLUG00000001081	SAFB	100	61.427	Myotis_lucifugus
ENSGALG00000001948	-	100	57.172	ENSNGAG00000019882	Safb	100	57.071	Nannospalax_galili
ENSGALG00000001948	-	96	62.808	ENSNLEG00000013551	SAFB	99	63.004	Nomascus_leucogenys
ENSGALG00000001948	-	60	56.357	ENSOPRG00000011561	-	100	56.860	Ochotona_princeps
ENSGALG00000001948	-	67	58.195	ENSODEG00000014838	SAFB	100	60.102	Octodon_degus
ENSGALG00000001948	-	90	48.783	ENSONIG00000002318	safb	64	45.070	Oreochromis_niloticus
ENSGALG00000001948	-	91	55.973	ENSOCUG00000014628	SAFB	63	56.239	Oryctolagus_cuniculus
ENSGALG00000001948	-	95	44.614	ENSORLG00020000404	safb	83	42.581	Oryzias_latipes_hni
ENSGALG00000001948	-	95	47.198	ENSORLG00015010733	safb	64	43.910	Oryzias_latipes_hsok
ENSGALG00000001948	-	90	47.463	ENSOMEG00000009066	safb	65	43.471	Oryzias_melastigma
ENSGALG00000001948	-	100	57.949	ENSOGAG00000027769	SAFB	100	59.278	Otolemur_garnettii
ENSGALG00000001948	-	78	58.699	ENSOARG00000007856	-	78	56.463	Ovis_aries
ENSGALG00000001948	-	97	59.468	ENSOARG00000007662	-	68	58.696	Ovis_aries
ENSGALG00000001948	-	97	63.578	ENSPPAG00000035129	SAFB	100	62.187	Pan_paniscus
ENSGALG00000001948	-	97	63.511	ENSPPRG00000017197	SAFB	100	61.013	Panthera_pardus
ENSGALG00000001948	-	97	63.578	ENSPTRG00000010335	SAFB	100	62.187	Pan_troglodytes
ENSGALG00000001948	-	97	62.939	ENSPANG00000007770	SAFB	100	61.924	Papio_anubis
ENSGALG00000001948	-	94	50.697	ENSPKIG00000009902	safb	67	47.939	Paramormyrops_kingsleyae
ENSGALG00000001948	-	100	78.364	ENSPSIG00000011679	-	99	80.599	Pelodiscus_sinensis
ENSGALG00000001948	-	100	71.120	ENSPSIG00000009367	-	100	69.887	Pelodiscus_sinensis
ENSGALG00000001948	-	58	66.071	ENSPCIG00000009504	-	99	66.409	Phascolarctos_cinereus
ENSGALG00000001948	-	89	45.711	ENSPFOG00000007745	safb	72	42.155	Poecilia_formosa
ENSGALG00000001948	-	83	49.002	ENSPMEG00000021023	safb	60	50.155	Poecilia_mexicana
ENSGALG00000001948	-	83	49.462	ENSPREG00000012496	safb	57	50.464	Poecilia_reticulata
ENSGALG00000001948	-	97	63.365	ENSPPYG00000009428	SAFB	100	60.766	Pongo_abelii
ENSGALG00000001948	-	100	59.175	ENSPCAG00000006475	SAFB	100	55.979	Procavia_capensis
ENSGALG00000001948	-	97	58.830	ENSPVAG00000004913	SAFB	100	54.498	Pteropus_vampyrus
ENSGALG00000001948	-	100	47.800	ENSPNAG00000021838	safb	66	45.672	Pygocentrus_nattereri
ENSGALG00000001948	-	97	56.150	ENSRBIG00000042509	SAFB	100	53.742	Rhinopithecus_bieti
ENSGALG00000001948	-	97	63.152	ENSRROG00000029278	SAFB	100	61.660	Rhinopithecus_roxellana
ENSGALG00000001948	-	97	63.259	ENSSBOG00000026291	SAFB	100	61.660	Saimiri_boliviensis_boliviensis
ENSGALG00000001948	-	100	50.765	ENSSFOG00015008156	safb	67	48.788	Scleropages_formosus
ENSGALG00000001948	-	97	44.705	ENSSMAG00000009316	safb	64	42.968	Scophthalmus_maximus
ENSGALG00000001948	-	97	43.684	ENSSDUG00000009652	safb	68	42.880	Seriola_dumerili
ENSGALG00000001948	-	96	44.911	ENSSLDG00000001670	safb	64	42.222	Seriola_lalandi_dorsalis
ENSGALG00000001948	-	60	58.603	ENSSARG00000010475	SAFB	100	57.174	Sorex_araneus
ENSGALG00000001948	-	82	79.697	ENSSPUG00000009820	-	98	80.328	Sphenodon_punctatus
ENSGALG00000001948	-	58	63.196	ENSSPUG00000009747	-	67	61.607	Sphenodon_punctatus
ENSGALG00000001948	-	91	52.530	ENSSPAG00000015682	safb	67	41.987	Stegastes_partitus
ENSGALG00000001948	-	100	62.048	ENSSSCG00000013522	SAFB	99	60.775	Sus_scrofa
ENSGALG00000001948	-	96	72.492	ENSTGUG00000000502	-	99	71.629	Taeniopygia_guttata
ENSGALG00000001948	-	93	84.872	ENSTGUG00000000489	-	100	84.316	Taeniopygia_guttata
ENSGALG00000001948	-	90	47.204	ENSTRUG00000003567	safb	64	42.338	Takifugu_rubripes
ENSGALG00000001948	-	89	44.669	ENSTNIG00000015470	safb	73	40.819	Tetraodon_nigroviridis
ENSGALG00000001948	-	50	67.143	ENSTBEG00000013124	-	52	67.143	Tupaia_belangeri
ENSGALG00000001948	-	77	61.867	ENSUAMG00000024543	SAFB	90	62.311	Ursus_americanus
ENSGALG00000001948	-	85	59.385	ENSUMAG00000009734	SAFB	94	57.609	Ursus_maritimus
ENSGALG00000001948	-	67	75.904	ENSVPAG00000012043	SAFB	52	75.904	Vicugna_pacos
ENSGALG00000001948	-	97	63.404	ENSVVUG00000013720	SAFB	87	61.427	Vulpes_vulpes
ENSGALG00000001948	-	67	50.234	ENSXETG00000008755	safb	99	53.788	Xenopus_tropicalis
ENSGALG00000001948	-	81	50.312	ENSXMAG00000003458	safb	57	51.084	Xiphophorus_maculatus