EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000001954 (Gene tree)
Gene ID: 395173
Gene Symbol: APTX
Alias: FHA-HIT
Full Name: Gallus gallus aprataxin (APTX)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 8999 bases
Position: chrZ:70789066-70798064
Accession: NM_001293074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000003019	DcpS_C	PF11969.8	1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000003023	-	1512	-	ENSGALP00000003019	350 (aa)	-	F1P5K8

Gene Model

Click here to download ENSGALG00000001954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000001954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000001954	APTX	100	61.714	ENSG00000137074	APTX	95	73.262	Homo_sapiens
ENSGALG00000001954	APTX	100	56.857	ENSAPOG00000008785	aptx	100	56.571	Acanthochromis_polyacanthus
ENSGALG00000001954	APTX	100	62.500	ENSAMEG00000007648	APTX	96	62.500	Ailuropoda_melanoleuca
ENSGALG00000001954	APTX	100	54.286	ENSACIG00000002035	aptx	100	52.857	Amphilophus_citrinellus
ENSGALG00000001954	APTX	100	57.265	ENSAOCG00000000634	aptx	100	56.980	Amphiprion_ocellaris
ENSGALG00000001954	APTX	100	57.265	ENSAPEG00000017253	aptx	100	56.980	Amphiprion_percula
ENSGALG00000001954	APTX	100	57.835	ENSATEG00000017383	aptx	100	57.835	Anabas_testudineus
ENSGALG00000001954	APTX	91	82.500	ENSAPLG00000015645	APTX	100	82.500	Anas_platyrhynchos
ENSGALG00000001954	APTX	100	63.248	ENSACAG00000003581	APTX	95	63.533	Anolis_carolinensis
ENSGALG00000001954	APTX	100	63.352	ENSANAG00000030160	APTX	96	63.352	Aotus_nancymaae
ENSGALG00000001954	APTX	99	58.739	ENSACLG00000018887	aptx	100	58.739	Astatotilapia_calliptera
ENSGALG00000001954	APTX	99	56.322	ENSAMXG00000039899	aptx	99	56.034	Astyanax_mexicanus
ENSGALG00000001954	APTX	100	60.795	ENSBTAG00000013947	APTX	98	60.795	Bos_taurus
ENSGALG00000001954	APTX	100	62.500	ENSCJAG00000007940	APTX	99	62.500	Callithrix_jacchus
ENSGALG00000001954	APTX	100	60.857	ENSCAFG00000001812	APTX	99	60.857	Canis_familiaris
ENSGALG00000001954	APTX	100	60.857	ENSCAFG00020015598	APTX	99	60.857	Canis_lupus_dingo
ENSGALG00000001954	APTX	100	60.511	ENSCHIG00000012896	APTX	99	60.511	Capra_hircus
ENSGALG00000001954	APTX	100	64.205	ENSTSYG00000003041	APTX	99	66.812	Carlito_syrichta
ENSGALG00000001954	APTX	63	68.539	ENSCAPG00000013470	APTX	100	68.927	Cavia_aperea
ENSGALG00000001954	APTX	100	61.080	ENSCPOG00000005975	APTX	100	73.224	Cavia_porcellus
ENSGALG00000001954	APTX	100	62.784	ENSCCAG00000036783	APTX	99	62.784	Cebus_capucinus
ENSGALG00000001954	APTX	100	62.360	ENSCATG00000042639	APTX	96	62.360	Cercocebus_atys
ENSGALG00000001954	APTX	100	62.108	ENSCLAG00000012185	APTX	100	72.678	Chinchilla_lanigera
ENSGALG00000001954	APTX	100	62.606	ENSCSAG00000009885	APTX	96	62.079	Chlorocebus_sabaeus
ENSGALG00000001954	APTX	100	69.122	ENSCPBG00000023973	APTX	98	70.255	Chrysemys_picta_bellii
ENSGALG00000001954	APTX	97	39.945	ENSCING00000008741	-	94	39.394	Ciona_intestinalis
ENSGALG00000001954	APTX	98	41.644	ENSCSAVG00000008038	-	97	41.598	Ciona_savignyi
ENSGALG00000001954	APTX	100	61.798	ENSCANG00000037253	APTX	99	61.236	Colobus_angolensis_palliatus
ENSGALG00000001954	APTX	99	60.807	ENSCGRG00001000705	Aptx	99	72.376	Cricetulus_griseus_chok1gshd
ENSGALG00000001954	APTX	99	60.807	ENSCGRG00000014159	Aptx	99	72.376	Cricetulus_griseus_crigri
ENSGALG00000001954	APTX	99	55.114	ENSCSEG00000009549	aptx	99	55.143	Cynoglossus_semilaevis
ENSGALG00000001954	APTX	100	57.102	ENSCVAG00000011942	aptx	99	56.818	Cyprinodon_variegatus
ENSGALG00000001954	APTX	99	52.436	ENSDARG00000027143	aptx	99	53.161	Danio_rerio
ENSGALG00000001954	APTX	100	63.173	ENSDNOG00000018498	APTX	96	63.173	Dasypus_novemcinctus
ENSGALG00000001954	APTX	100	60.511	ENSDORG00000002139	Aptx	100	73.770	Dipodomys_ordii
ENSGALG00000001954	APTX	51	40.571	FBgn0038704	CG5316	87	47.541	Drosophila_melanogaster
ENSGALG00000001954	APTX	82	61.379	ENSETEG00000012459	APTX	78	61.775	Echinops_telfairi
ENSGALG00000001954	APTX	96	47.198	ENSEBUG00000013914	aptx	93	47.353	Eptatretus_burgeri
ENSGALG00000001954	APTX	99	61.143	ENSEASG00005004566	APTX	99	61.143	Equus_asinus_asinus
ENSGALG00000001954	APTX	99	61.714	ENSECAG00000012674	APTX	92	61.714	Equus_caballus
ENSGALG00000001954	APTX	85	59.468	ENSEEUG00000010693	APTX	95	58.804	Erinaceus_europaeus
ENSGALG00000001954	APTX	100	62.216	ENSFCAG00000008728	APTX	99	62.216	Felis_catus
ENSGALG00000001954	APTX	100	78.286	ENSFALG00000001230	APTX	100	78.571	Ficedula_albicollis
ENSGALG00000001954	APTX	100	58.239	ENSFDAG00000013752	APTX	100	72.678	Fukomys_damarensis
ENSGALG00000001954	APTX	83	54.098	ENSFHEG00000021328	aptx	73	53.770	Fundulus_heteroclitus
ENSGALG00000001954	APTX	99	55.840	ENSGMOG00000012505	aptx	99	55.556	Gadus_morhua
ENSGALG00000001954	APTX	100	57.143	ENSGAFG00000005086	aptx	100	56.857	Gambusia_affinis
ENSGALG00000001954	APTX	99	57.265	ENSGACG00000017887	aptx	99	57.265	Gasterosteus_aculeatus
ENSGALG00000001954	APTX	100	68.272	ENSGAGG00000013230	APTX	100	69.405	Gopherus_agassizii
ENSGALG00000001954	APTX	85	61.794	ENSGGOG00000014232	APTX	81	72.297	Gorilla_gorilla
ENSGALG00000001954	APTX	99	58.739	ENSHBUG00000021058	aptx	100	58.739	Haplochromis_burtoni
ENSGALG00000001954	APTX	100	59.091	ENSHGLG00000015093	APTX	100	73.743	Heterocephalus_glaber_female
ENSGALG00000001954	APTX	100	59.091	ENSHGLG00100013482	APTX	100	73.743	Heterocephalus_glaber_male
ENSGALG00000001954	APTX	99	56.034	ENSHCOG00000018216	aptx	96	56.034	Hippocampus_comes
ENSGALG00000001954	APTX	99	56.897	ENSIPUG00000017548	aptx	99	56.322	Ictalurus_punctatus
ENSGALG00000001954	APTX	100	60.571	ENSSTOG00000005185	APTX	100	73.770	Ictidomys_tridecemlineatus
ENSGALG00000001954	APTX	100	58.857	ENSJJAG00000015653	Aptx	100	58.857	Jaculus_jaculus
ENSGALG00000001954	APTX	100	56.818	ENSKMAG00000000117	aptx	100	56.534	Kryptolebias_marmoratus
ENSGALG00000001954	APTX	99	58.357	ENSLBEG00000015353	aptx	99	58.357	Labrus_bergylta
ENSGALG00000001954	APTX	99	52.078	ENSLBEG00000021489	APTX	99	50.970	Labrus_bergylta
ENSGALG00000001954	APTX	99	59.777	ENSLACG00000003376	APTX	99	59.777	Latimeria_chalumnae
ENSGALG00000001954	APTX	99	58.640	ENSLOCG00000011556	aptx	95	58.640	Lepisosteus_oculatus
ENSGALG00000001954	APTX	100	62.606	ENSLAFG00000005665	APTX	99	62.606	Loxodonta_africana
ENSGALG00000001954	APTX	99	62.254	ENSMFAG00000043141	APTX	96	62.254	Macaca_fascicularis
ENSGALG00000001954	APTX	100	62.079	ENSMMUG00000007724	APTX	96	62.079	Macaca_mulatta
ENSGALG00000001954	APTX	100	62.360	ENSMNEG00000042341	APTX	98	71.717	Macaca_nemestrina
ENSGALG00000001954	APTX	100	62.079	ENSMLEG00000035137	APTX	93	71.212	Mandrillus_leucophaeus
ENSGALG00000001954	APTX	100	57.835	ENSMAMG00000018377	aptx	100	57.265	Mastacembelus_armatus
ENSGALG00000001954	APTX	99	58.453	ENSMZEG00005022621	aptx	100	58.453	Maylandia_zebra
ENSGALG00000001954	APTX	52	97.790	ENSMGAG00000005736	APTX	100	97.790	Meleagris_gallopavo
ENSGALG00000001954	APTX	99	59.942	ENSMAUG00000006039	Aptx	99	71.823	Mesocricetus_auratus
ENSGALG00000001954	APTX	100	61.429	ENSMICG00000006603	APTX	97	61.429	Microcebus_murinus
ENSGALG00000001954	APTX	99	60.632	ENSMOCG00000000869	Aptx	99	71.823	Microtus_ochrogaster
ENSGALG00000001954	APTX	99	58.166	ENSMMOG00000007028	aptx	99	57.880	Mola_mola
ENSGALG00000001954	APTX	99	55.650	ENSMODG00000003365	APTX	99	55.650	Monodelphis_domestica
ENSGALG00000001954	APTX	100	50.997	ENSMALG00000003828	aptx	100	51.567	Monopterus_albus
ENSGALG00000001954	APTX	79	72.376	MGP_CAROLIEiJ_G0025897	-	99	72.376	Mus_caroli
ENSGALG00000001954	APTX	99	59.714	ENSMUSG00000028411	Aptx	99	72.928	Mus_musculus
ENSGALG00000001954	APTX	99	60.286	MGP_PahariEiJ_G0024020	Aptx	99	60.286	Mus_pahari
ENSGALG00000001954	APTX	99	60.000	MGP_SPRETEiJ_G0026846	Aptx	97	59.714	Mus_spretus
ENSGALG00000001954	APTX	100	61.932	ENSMPUG00000004290	APTX	99	61.932	Mustela_putorius_furo
ENSGALG00000001954	APTX	100	63.068	ENSMLUG00000016081	APTX	95	63.068	Myotis_lucifugus
ENSGALG00000001954	APTX	100	60.227	ENSNGAG00000016314	Aptx	100	72.678	Nannospalax_galili
ENSGALG00000001954	APTX	99	58.166	ENSNBRG00000014199	aptx	100	58.166	Neolamprologus_brichardi
ENSGALG00000001954	APTX	100	62.890	ENSNLEG00000032184	APTX	99	62.890	Nomascus_leucogenys
ENSGALG00000001954	APTX	99	54.441	ENSMEUG00000004153	APTX	99	53.582	Notamacropus_eugenii
ENSGALG00000001954	APTX	85	57.525	ENSOPRG00000012403	APTX	95	57.525	Ochotona_princeps
ENSGALG00000001954	APTX	100	60.511	ENSODEG00000015832	-	100	73.224	Octodon_degus
ENSGALG00000001954	APTX	74	70.202	ENSODEG00000000097	-	93	70.202	Octodon_degus
ENSGALG00000001954	APTX	100	58.120	ENSONIG00000014541	aptx	83	58.120	Oreochromis_niloticus
ENSGALG00000001954	APTX	85	58.224	ENSOANG00000009878	APTX	98	58.224	Ornithorhynchus_anatinus
ENSGALG00000001954	APTX	79	75.824	ENSOCUG00000025059	-	92	75.824	Oryctolagus_cuniculus
ENSGALG00000001954	APTX	99	62.784	ENSOCUG00000000738	-	97	61.080	Oryctolagus_cuniculus
ENSGALG00000001954	APTX	100	55.714	ENSORLG00000006237	aptx	100	55.714	Oryzias_latipes
ENSGALG00000001954	APTX	100	56.000	ENSORLG00020021478	aptx	100	56.000	Oryzias_latipes_hni
ENSGALG00000001954	APTX	100	56.125	ENSORLG00015021873	aptx	100	55.840	Oryzias_latipes_hsok
ENSGALG00000001954	APTX	88	58.766	ENSOMEG00000007875	aptx	85	54.878	Oryzias_melastigma
ENSGALG00000001954	APTX	100	61.429	ENSOGAG00000005388	APTX	96	61.429	Otolemur_garnettii
ENSGALG00000001954	APTX	100	60.795	ENSOARG00000009598	APTX	96	60.795	Ovis_aries
ENSGALG00000001954	APTX	100	61.714	ENSPPAG00000030295	APTX	96	61.714	Pan_paniscus
ENSGALG00000001954	APTX	100	62.216	ENSPPRG00000017524	APTX	99	62.216	Panthera_pardus
ENSGALG00000001954	APTX	100	62.216	ENSPTIG00000020000	APTX	99	62.216	Panthera_tigris_altaica
ENSGALG00000001954	APTX	100	61.714	ENSPTRG00000020850	APTX	99	61.714	Pan_troglodytes
ENSGALG00000001954	APTX	100	61.798	ENSPANG00000025301	APTX	93	70.707	Papio_anubis
ENSGALG00000001954	APTX	99	57.061	ENSPKIG00000013601	aptx	99	57.061	Paramormyrops_kingsleyae
ENSGALG00000001954	APTX	100	67.045	ENSPSIG00000010521	APTX	95	67.045	Pelodiscus_sinensis
ENSGALG00000001954	APTX	98	54.467	ENSPMGG00000018649	aptx	99	55.043	Periophthalmus_magnuspinnatus
ENSGALG00000001954	APTX	99	61.207	ENSPEMG00000007747	Aptx	99	73.481	Peromyscus_maniculatus_bairdii
ENSGALG00000001954	APTX	99	45.299	ENSPMAG00000008417	aptx	97	45.299	Petromyzon_marinus
ENSGALG00000001954	APTX	100	57.627	ENSPCIG00000029852	APTX	100	57.627	Phascolarctos_cinereus
ENSGALG00000001954	APTX	100	57.714	ENSPFOG00000005131	-	99	57.143	Poecilia_formosa
ENSGALG00000001954	APTX	100	57.714	ENSPFOG00000004992	aptx	100	57.143	Poecilia_formosa
ENSGALG00000001954	APTX	100	57.714	ENSPLAG00000007906	aptx	100	57.143	Poecilia_latipinna
ENSGALG00000001954	APTX	100	57.714	ENSPLAG00000007960	APTX	100	57.143	Poecilia_latipinna
ENSGALG00000001954	APTX	100	58.000	ENSPMEG00000018504	aptx	100	57.429	Poecilia_mexicana
ENSGALG00000001954	APTX	100	58.000	ENSPMEG00000019789	APTX	100	57.429	Poecilia_mexicana
ENSGALG00000001954	APTX	100	52.571	ENSPREG00000004375	aptx	100	52.000	Poecilia_reticulata
ENSGALG00000001954	APTX	100	62.890	ENSPPYG00000019142	APTX	96	62.890	Pongo_abelii
ENSGALG00000001954	APTX	100	52.557	ENSPCAG00000010014	APTX	99	52.557	Procavia_capensis
ENSGALG00000001954	APTX	100	63.173	ENSPCOG00000016780	APTX	99	63.173	Propithecus_coquereli
ENSGALG00000001954	APTX	100	61.364	ENSPVAG00000011468	APTX	96	61.364	Pteropus_vampyrus
ENSGALG00000001954	APTX	99	58.739	ENSPNYG00000007675	aptx	100	58.739	Pundamilia_nyererei
ENSGALG00000001954	APTX	99	54.179	ENSPNAG00000015984	aptx	99	53.602	Pygocentrus_nattereri
ENSGALG00000001954	APTX	99	60.857	ENSRNOG00000006582	Aptx	99	59.659	Rattus_norvegicus
ENSGALG00000001954	APTX	100	61.517	ENSRBIG00000042913	APTX	99	61.517	Rhinopithecus_bieti
ENSGALG00000001954	APTX	100	61.517	ENSRROG00000035395	APTX	93	70.707	Rhinopithecus_roxellana
ENSGALG00000001954	APTX	100	63.068	ENSSBOG00000025215	APTX	99	63.068	Saimiri_boliviensis_boliviensis
ENSGALG00000001954	APTX	99	58.790	ENSSHAG00000012205	APTX	95	57.880	Sarcophilus_harrisii
ENSGALG00000001954	APTX	99	59.544	ENSSFOG00015009267	aptx	99	59.544	Scleropages_formosus
ENSGALG00000001954	APTX	100	56.857	ENSSMAG00000008839	aptx	100	56.857	Scophthalmus_maximus
ENSGALG00000001954	APTX	100	58.857	ENSSDUG00000001989	aptx	100	58.857	Seriola_dumerili
ENSGALG00000001954	APTX	100	58.405	ENSSLDG00000004915	aptx	100	58.405	Seriola_lalandi_dorsalis
ENSGALG00000001954	APTX	100	67.614	ENSSPUG00000008994	APTX	86	67.614	Sphenodon_punctatus
ENSGALG00000001954	APTX	100	56.374	ENSSPAG00000020373	aptx	100	56.374	Stegastes_partitus
ENSGALG00000001954	APTX	99	60.114	ENSSSCG00000011001	APTX	99	60.114	Sus_scrofa
ENSGALG00000001954	APTX	100	74.085	ENSTGUG00000001441	APTX	99	74.085	Taeniopygia_guttata
ENSGALG00000001954	APTX	99	54.023	ENSTRUG00000009794	aptx	99	54.023	Takifugu_rubripes
ENSGALG00000001954	APTX	99	55.331	ENSTNIG00000010570	aptx	99	54.467	Tetraodon_nigroviridis
ENSGALG00000001954	APTX	100	57.102	ENSTBEG00000008504	APTX	96	57.102	Tupaia_belangeri
ENSGALG00000001954	APTX	93	55.215	ENSTTRG00000007384	APTX	95	55.215	Tursiops_truncatus
ENSGALG00000001954	APTX	99	63.143	ENSUAMG00000003700	APTX	97	63.143	Ursus_americanus
ENSGALG00000001954	APTX	99	63.143	ENSUMAG00000005837	APTX	99	63.143	Ursus_maritimus
ENSGALG00000001954	APTX	68	62.791	ENSVPAG00000001297	APTX	70	62.791	Vicugna_pacos
ENSGALG00000001954	APTX	100	60.857	ENSVVUG00000021130	APTX	99	60.857	Vulpes_vulpes
ENSGALG00000001954	APTX	99	54.598	ENSXETG00000024143	aptx	99	54.728	Xenopus_tropicalis
ENSGALG00000001954	APTX	100	56.425	ENSXCOG00000005020	aptx	100	56.145	Xiphophorus_couchianus
ENSGALG00000001954	APTX	100	58.000	ENSXMAG00000022086	aptx	97	57.714	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000012	single strand break repair	21873635.	IBA	Process
GO:0003697	single-stranded DNA binding	21873635.	IBA	Function
GO:0003725	double-stranded RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0006302	double-strand break repair	21873635.	IBA	Process
GO:0030983	mismatched DNA binding	21873635.	IBA	Function
GO:0033699	DNA 5'-adenosine monophosphate hydrolase activity	21873635.	IBA	Function
GO:0033699	DNA 5'-adenosine monophosphate hydrolase activity	16964241.	IMP	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	IEA	Process
GO:0120108	DNA-3'-diphospho-5'-guanosine diphosphatase	-	IEA	Function
GO:1990165	single-strand break-containing DNA binding	21873635.	IBA	Function