EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000001972 (Gene tree)
Gene ID: 768611
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 8092 bases
Position: chr8:1643277-1651368
Accession: 768611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000003060	PRP38	PF03371.15	2.1e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000003064	-	2114	-	ENSGALP00000003060	549 (aa)	XP_001231650	E1BVP9

Gene Model

Click here to download ENSGALG00000001972's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000001972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000001972	-	100	86.521	ENSBTAG00000047874	PRPF38B	100	86.751	Bos_taurus
ENSGALG00000001972	-	100	74.727	ENSCAFG00020010992	-	100	78.881	Canis_lupus_dingo
ENSGALG00000001972	-	100	86.521	ENSCHIG00000024357	-	100	86.751	Capra_hircus
ENSGALG00000001972	-	79	86.207	ENSCAPG00000009606	-	98	86.936	Cavia_aperea
ENSGALG00000001972	-	100	85.246	ENSCPOG00000039545	-	100	86.051	Cavia_porcellus
ENSGALG00000001972	-	100	85.455	ENSCLAG00000005801	-	100	86.257	Chinchilla_lanigera
ENSGALG00000001972	-	64	75.354	ENSCHOG00000008972	-	93	76.667	Choloepus_hoffmanni
ENSGALG00000001972	-	100	92.532	ENSCPBG00000028299	-	100	92.532	Chrysemys_picta_bellii
ENSGALG00000001972	-	56	53.481	ENSCSAVG00000009443	-	70	74.737	Ciona_savignyi
ENSGALG00000001972	-	83	83.885	ENSETEG00000014690	-	99	84.035	Echinops_telfairi
ENSGALG00000001972	-	83	92.341	ENSFALG00000002673	-	89	93.654	Ficedula_albicollis
ENSGALG00000001972	-	92	61.614	ENSGAFG00000008943	-	99	60.078	Gambusia_affinis
ENSGALG00000001972	-	100	92.532	ENSGAGG00000001563	-	100	92.532	Gopherus_agassizii
ENSGALG00000001972	-	100	86.703	ENSHGLG00000016583	PRPF38B	100	86.799	Heterocephalus_glaber_female
ENSGALG00000001972	-	100	86.521	ENSHGLG00100015525	-	100	86.618	Heterocephalus_glaber_male
ENSGALG00000001972	-	77	63.948	ENSHCOG00000001071	-	99	60.886	Hippocampus_comes
ENSGALG00000001972	-	90	61.462	ENSKMAG00000005540	-	97	58.974	Kryptolebias_marmoratus
ENSGALG00000001972	-	93	75.483	ENSLACG00000015511	-	99	71.480	Latimeria_chalumnae
ENSGALG00000001972	-	60	89.970	ENSMOCG00000020285	-	100	84.574	Microtus_ochrogaster
ENSGALG00000001972	-	56	94.463	ENSMODG00000002350	-	100	86.799	Monodelphis_domestica
ENSGALG00000001972	-	92	61.284	ENSMALG00000019479	-	99	59.846	Monopterus_albus
ENSGALG00000001972	-	80	86.253	ENSOPRG00000013543	-	81	86.253	Ochotona_princeps
ENSGALG00000001972	-	83	64.938	ENSONIG00000010129	-	99	61.111	Oreochromis_niloticus
ENSGALG00000001972	-	90	82.353	ENSOANG00000007343	-	91	88.514	Ornithorhynchus_anatinus
ENSGALG00000001972	-	83	63.941	ENSORLG00000015621	-	91	89.873	Oryzias_latipes
ENSGALG00000001972	-	92	63.386	ENSORLG00020016276	-	91	89.873	Oryzias_latipes_hni
ENSGALG00000001972	-	92	63.189	ENSORLG00015016270	-	77	89.873	Oryzias_latipes_hsok
ENSGALG00000001972	-	92	64.780	ENSOMEG00000022050	-	94	89.375	Oryzias_melastigma
ENSGALG00000001972	-	100	85.064	ENSOGAG00000027048	-	100	85.560	Otolemur_garnettii
ENSGALG00000001972	-	100	85.428	ENSOARG00000018899	-	100	85.974	Ovis_aries
ENSGALG00000001972	-	93	65.455	ENSPKIG00000017291	-	88	60.561	Paramormyrops_kingsleyae
ENSGALG00000001972	-	97	61.878	ENSPKIG00000004815	-	97	60.550	Paramormyrops_kingsleyae
ENSGALG00000001972	-	100	91.621	ENSPSIG00000016569	-	100	91.621	Pelodiscus_sinensis
ENSGALG00000001972	-	92	62.008	ENSPFOG00000004025	-	84	90.506	Poecilia_formosa
ENSGALG00000001972	-	92	62.008	ENSPLAG00000019842	-	99	60.465	Poecilia_latipinna
ENSGALG00000001972	-	84	62.500	ENSPMEG00000004807	-	96	60.229	Poecilia_mexicana
ENSGALG00000001972	-	92	60.827	ENSPREG00000015599	-	86	90.506	Poecilia_reticulata
ENSGALG00000001972	-	100	83.060	ENSRNOG00000020438	Prpf38b	100	84.755	Rattus_norvegicus
ENSGALG00000001972	-	93	62.612	ENSSFOG00015011251	-	84	91.515	Scleropages_formosus
ENSGALG00000001972	-	92	61.942	ENSSLDG00000023487	-	86	89.873	Seriola_lalandi_dorsalis
ENSGALG00000001972	-	100	87.862	ENSSPUG00000017742	-	100	88.768	Sphenodon_punctatus
ENSGALG00000001972	-	78	61.571	ENSTRUG00000011765	-	94	59.604	Takifugu_rubripes
ENSGALG00000001972	-	78	62.929	ENSTNIG00000015299	-	55	85.268	Tetraodon_nigroviridis
ENSGALG00000001972	-	93	84.736	ENSTBEG00000007504	-	100	84.736	Tupaia_belangeri
ENSGALG00000001972	-	100	86.885	ENSTTRG00000006479	-	100	87.500	Tursiops_truncatus
ENSGALG00000001972	-	93	81.729	ENSVPAG00000005541	-	99	79.053	Vicugna_pacos
ENSGALG00000001972	-	94	73.592	ENSXETG00000005260	prpf38b	100	67.812	Xenopus_tropicalis
ENSGALG00000001972	-	92	61.315	ENSXCOG00000008329	-	99	60.827	Xiphophorus_couchianus
ENSGALG00000001972	-	92	62.157	ENSXMAG00000023831	-	99	59.884	Xiphophorus_maculatus