EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000002127 (Gene tree)
Gene ID: 419621
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 1066 bases
Position: chr23:4182923-4183988
Accession: 419621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000003319	LSM	PF01423.22	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000003324	LSM10-201	686	XM_417768	ENSGALP00000003319	123 (aa)	XP_004947821	E1BY33

Gene Model

Click here to download ENSGALG00000002127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000002127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000002127	LSM10	100	72.358	ENSG00000181817	LSM10	100	72.358	Homo_sapiens
ENSGALG00000002127	LSM10	100	73.984	ENSAMEG00000019854	LSM10	100	73.984	Ailuropoda_melanoleuca
ENSGALG00000002127	LSM10	93	66.957	ENSACIG00000015420	oscp1a	76	66.957	Amphilophus_citrinellus
ENSGALG00000002127	LSM10	90	65.766	ENSAOCG00000015607	LSM10	86	65.766	Amphiprion_ocellaris
ENSGALG00000002127	LSM10	95	66.667	ENSAOCG00000014654	-	97	66.667	Amphiprion_ocellaris
ENSGALG00000002127	LSM10	95	66.667	ENSAOCG00000015618	LSM10	97	66.667	Amphiprion_ocellaris
ENSGALG00000002127	LSM10	90	65.766	ENSAPEG00000021851	LSM10	86	65.766	Amphiprion_percula
ENSGALG00000002127	LSM10	95	66.667	ENSAPEG00000021845	-	97	66.667	Amphiprion_percula
ENSGALG00000002127	LSM10	94	64.655	ENSATEG00000006310	oscp1a	86	64.655	Anabas_testudineus
ENSGALG00000002127	LSM10	100	73.171	ENSACAG00000001231	LSM10	100	73.171	Anolis_carolinensis
ENSGALG00000002127	LSM10	96	73.729	ENSANAG00000031489	-	97	73.729	Aotus_nancymaae
ENSGALG00000002127	LSM10	100	73.171	ENSANAG00000018759	-	100	73.171	Aotus_nancymaae
ENSGALG00000002127	LSM10	95	64.957	ENSACLG00000004728	oscp1a	95	64.957	Astatotilapia_calliptera
ENSGALG00000002127	LSM10	96	67.797	ENSAMXG00000025301	oscp1a	98	67.797	Astyanax_mexicanus
ENSGALG00000002127	LSM10	96	76.271	ENSBTAG00000024096	LSM10	97	76.271	Bos_taurus
ENSGALG00000002127	LSM10	100	72.358	ENSCJAG00000044880	LSM10	100	72.358	Callithrix_jacchus
ENSGALG00000002127	LSM10	100	73.984	ENSCAFG00000003382	LSM10	100	73.984	Canis_familiaris
ENSGALG00000002127	LSM10	100	73.984	ENSCAFG00020008920	LSM10	100	73.984	Canis_lupus_dingo
ENSGALG00000002127	LSM10	96	76.271	ENSCHIG00000009398	LSM10	97	76.271	Capra_hircus
ENSGALG00000002127	LSM10	100	73.984	ENSCAPG00000012567	LSM10	100	73.984	Cavia_aperea
ENSGALG00000002127	LSM10	100	73.984	ENSCPOG00000039302	LSM10	100	73.984	Cavia_porcellus
ENSGALG00000002127	LSM10	96	72.881	ENSCCAG00000008378	-	96	72.881	Cebus_capucinus
ENSGALG00000002127	LSM10	100	73.171	ENSCCAG00000018913	-	100	73.171	Cebus_capucinus
ENSGALG00000002127	LSM10	100	71.545	ENSCATG00000006589	LSM10	100	71.545	Cercocebus_atys
ENSGALG00000002127	LSM10	100	73.171	ENSCLAG00000008633	LSM10	100	73.171	Chinchilla_lanigera
ENSGALG00000002127	LSM10	100	71.545	ENSCSAG00000000134	LSM10	100	71.545	Chlorocebus_sabaeus
ENSGALG00000002127	LSM10	100	72.000	ENSCHOG00000008615	LSM10	100	72.000	Choloepus_hoffmanni
ENSGALG00000002127	LSM10	83	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSGALG00000002127	LSM10	100	71.545	ENSCANG00000019928	LSM10	100	71.545	Colobus_angolensis_palliatus
ENSGALG00000002127	LSM10	93	65.812	ENSCGRG00001022673	-	94	65.812	Cricetulus_griseus_chok1gshd
ENSGALG00000002127	LSM10	98	74.380	ENSCGRG00001004317	-	99	74.380	Cricetulus_griseus_chok1gshd
ENSGALG00000002127	LSM10	98	74.380	ENSCGRG00000014935	-	99	74.380	Cricetulus_griseus_crigri
ENSGALG00000002127	LSM10	93	65.812	ENSCGRG00000015514	-	94	65.812	Cricetulus_griseus_crigri
ENSGALG00000002127	LSM10	95	62.393	ENSCSEG00000010374	oscp1a	79	62.393	Cynoglossus_semilaevis
ENSGALG00000002127	LSM10	95	62.393	ENSCVAG00000001536	oscp1a	88	62.393	Cyprinodon_variegatus
ENSGALG00000002127	LSM10	98	69.421	ENSDARG00000101222	oscp1a	100	69.421	Danio_rerio
ENSGALG00000002127	LSM10	69	72.941	ENSDARG00000109563	CABZ01074453.1	99	72.941	Danio_rerio
ENSGALG00000002127	LSM10	99	74.590	ENSDNOG00000036662	LSM10	99	74.590	Dasypus_novemcinctus
ENSGALG00000002127	LSM10	100	72.358	ENSDORG00000007579	Lsm10	100	72.358	Dipodomys_ordii
ENSGALG00000002127	LSM10	100	73.171	ENSETEG00000005703	LSM10	100	73.171	Echinops_telfairi
ENSGALG00000002127	LSM10	91	53.571	ENSEBUG00000001312	oscp1a	92	53.571	Eptatretus_burgeri
ENSGALG00000002127	LSM10	100	74.797	ENSEASG00005012194	LSM10	100	74.797	Equus_asinus_asinus
ENSGALG00000002127	LSM10	100	74.797	ENSECAG00000005071	LSM10	100	74.797	Equus_caballus
ENSGALG00000002127	LSM10	100	73.984	ENSEEUG00000012032	LSM10	100	73.984	Erinaceus_europaeus
ENSGALG00000002127	LSM10	99	68.852	ENSELUG00000007452	oscp1a	100	68.852	Esox_lucius
ENSGALG00000002127	LSM10	100	86.992	ENSFALG00000000851	LSM10	100	86.992	Ficedula_albicollis
ENSGALG00000002127	LSM10	100	73.984	ENSFDAG00000021056	LSM10	100	73.984	Fukomys_damarensis
ENSGALG00000002127	LSM10	91	65.487	ENSFHEG00000001058	oscp1a	97	65.487	Fundulus_heteroclitus
ENSGALG00000002127	LSM10	93	66.957	ENSGMOG00000019832	oscp1a	96	66.957	Gadus_morhua
ENSGALG00000002127	LSM10	96	60.331	ENSGAFG00000016445	oscp1a	97	60.331	Gambusia_affinis
ENSGALG00000002127	LSM10	96	62.712	ENSGACG00000002329	oscp1a	97	62.712	Gasterosteus_aculeatus
ENSGALG00000002127	LSM10	100	84.553	ENSGAGG00000024848	LSM10	100	84.553	Gopherus_agassizii
ENSGALG00000002127	LSM10	100	72.358	ENSGGOG00000003556	LSM10	100	72.358	Gorilla_gorilla
ENSGALG00000002127	LSM10	95	65.812	ENSHBUG00000001722	oscp1a	95	65.812	Haplochromis_burtoni
ENSGALG00000002127	LSM10	100	71.545	ENSHGLG00000011625	LSM10	100	71.545	Heterocephalus_glaber_female
ENSGALG00000002127	LSM10	100	71.545	ENSHGLG00100001769	LSM10	100	71.545	Heterocephalus_glaber_male
ENSGALG00000002127	LSM10	85	70.476	ENSIPUG00000005808	oscp1a	91	70.476	Ictalurus_punctatus
ENSGALG00000002127	LSM10	100	73.171	ENSSTOG00000000606	LSM10	100	73.171	Ictidomys_tridecemlineatus
ENSGALG00000002127	LSM10	95	63.248	ENSKMAG00000012143	oscp1a	97	63.248	Kryptolebias_marmoratus
ENSGALG00000002127	LSM10	95	64.957	ENSLBEG00000017764	oscp1a	96	64.957	Labrus_bergylta
ENSGALG00000002127	LSM10	100	69.106	ENSLACG00000015904	LSM10	95	69.106	Latimeria_chalumnae
ENSGALG00000002127	LSM10	97	70.588	ENSLOCG00000018277	oscp1a	98	70.588	Lepisosteus_oculatus
ENSGALG00000002127	LSM10	100	72.358	ENSLAFG00000009600	LSM10	100	72.358	Loxodonta_africana
ENSGALG00000002127	LSM10	100	71.545	ENSMFAG00000009115	LSM10	100	71.545	Macaca_fascicularis
ENSGALG00000002127	LSM10	100	71.545	ENSMMUG00000017338	LSM10	100	71.545	Macaca_mulatta
ENSGALG00000002127	LSM10	100	71.545	ENSMNEG00000020023	LSM10	100	71.545	Macaca_nemestrina
ENSGALG00000002127	LSM10	100	71.545	ENSMLEG00000025150	LSM10	100	71.545	Mandrillus_leucophaeus
ENSGALG00000002127	LSM10	97	64.706	ENSMAMG00000004427	oscp1a	98	64.706	Mastacembelus_armatus
ENSGALG00000002127	LSM10	95	64.957	ENSMZEG00005026307	oscp1a	95	64.957	Maylandia_zebra
ENSGALG00000002127	LSM10	100	96.748	ENSMGAG00000015707	LSM10	100	96.748	Meleagris_gallopavo
ENSGALG00000002127	LSM10	96	76.271	ENSMAUG00000016624	Lsm10	97	76.271	Mesocricetus_auratus
ENSGALG00000002127	LSM10	99	73.770	ENSMOCG00000021943	Lsm10	100	73.770	Microtus_ochrogaster
ENSGALG00000002127	LSM10	98	66.942	ENSMMOG00000013597	oscp1a	90	66.942	Mola_mola
ENSGALG00000002127	LSM10	100	80.488	ENSMODG00000023328	LSM10	100	80.488	Monodelphis_domestica
ENSGALG00000002127	LSM10	52	70.312	ENSMALG00000012661	oscp1a	50	70.312	Monopterus_albus
ENSGALG00000002127	LSM10	96	75.424	MGP_CAROLIEiJ_G0026467	Lsm10	100	75.269	Mus_caroli
ENSGALG00000002127	LSM10	98	73.554	ENSMUSG00000050188	Lsm10	100	75.269	Mus_musculus
ENSGALG00000002127	LSM10	98	73.554	MGP_PahariEiJ_G0028798	Lsm10	100	75.269	Mus_pahari
ENSGALG00000002127	LSM10	98	73.554	MGP_SPRETEiJ_G0027446	Lsm10	100	75.269	Mus_spretus
ENSGALG00000002127	LSM10	100	73.984	ENSMPUG00000018593	LSM10	100	73.984	Mustela_putorius_furo
ENSGALG00000002127	LSM10	100	73.984	ENSMLUG00000023895	LSM10	100	73.984	Myotis_lucifugus
ENSGALG00000002127	LSM10	100	71.545	ENSNGAG00000015011	Lsm10	100	71.545	Nannospalax_galili
ENSGALG00000002127	LSM10	96	65.254	ENSNBRG00000014306	oscp1a	96	65.254	Neolamprologus_brichardi
ENSGALG00000002127	LSM10	100	72.358	ENSNLEG00000033754	LSM10	100	72.358	Nomascus_leucogenys
ENSGALG00000002127	LSM10	100	80.488	ENSMEUG00000006313	LSM10	100	80.488	Notamacropus_eugenii
ENSGALG00000002127	LSM10	100	74.797	ENSOPRG00000001699	LSM10	100	74.797	Ochotona_princeps
ENSGALG00000002127	LSM10	100	73.171	ENSODEG00000019161	LSM10	100	73.171	Octodon_degus
ENSGALG00000002127	LSM10	97	65.546	ENSONIG00000020904	oscp1a	98	65.546	Oreochromis_niloticus
ENSGALG00000002127	LSM10	100	77.236	ENSOANG00000002066	LSM10	100	77.236	Ornithorhynchus_anatinus
ENSGALG00000002127	LSM10	100	73.984	ENSOCUG00000005333	LSM10	100	73.984	Oryctolagus_cuniculus
ENSGALG00000002127	LSM10	93	67.826	ENSORLG00000009504	oscp1a	95	67.826	Oryzias_latipes
ENSGALG00000002127	LSM10	93	67.826	ENSORLG00020016201	oscp1a	95	67.826	Oryzias_latipes_hni
ENSGALG00000002127	LSM10	93	66.957	ENSORLG00015007794	oscp1a	95	66.957	Oryzias_latipes_hsok
ENSGALG00000002127	LSM10	100	73.984	ENSOGAG00000002653	LSM10	100	73.984	Otolemur_garnettii
ENSGALG00000002127	LSM10	96	76.271	ENSOARG00000009596	LSM10	97	76.271	Ovis_aries
ENSGALG00000002127	LSM10	100	72.358	ENSPPAG00000023465	LSM10	100	72.358	Pan_paniscus
ENSGALG00000002127	LSM10	100	75.610	ENSPPRG00000014619	LSM10	100	75.610	Panthera_pardus
ENSGALG00000002127	LSM10	100	75.610	ENSPTIG00000004613	LSM10	100	75.610	Panthera_tigris_altaica
ENSGALG00000002127	LSM10	100	72.358	ENSPTRG00000000539	LSM10	100	72.358	Pan_troglodytes
ENSGALG00000002127	LSM10	100	71.545	ENSPANG00000023172	LSM10	100	71.545	Papio_anubis
ENSGALG00000002127	LSM10	97	69.748	ENSPKIG00000003728	oscp1a	96	69.748	Paramormyrops_kingsleyae
ENSGALG00000002127	LSM10	100	83.740	ENSPSIG00000000590	LSM10	100	83.740	Pelodiscus_sinensis
ENSGALG00000002127	LSM10	63	67.532	ENSPMGG00000015718	oscp1a	100	67.532	Periophthalmus_magnuspinnatus
ENSGALG00000002127	LSM10	84	82.524	ENSPCIG00000014865	LSM10	76	82.524	Phascolarctos_cinereus
ENSGALG00000002127	LSM10	96	66.102	ENSPFOG00000020490	oscp1a	100	66.102	Poecilia_formosa
ENSGALG00000002127	LSM10	96	66.102	ENSPLAG00000016537	oscp1a	90	66.102	Poecilia_latipinna
ENSGALG00000002127	LSM10	89	68.182	ENSPMEG00000000174	oscp1a	96	68.182	Poecilia_mexicana
ENSGALG00000002127	LSM10	96	64.407	ENSPREG00000009899	oscp1a	90	64.407	Poecilia_reticulata
ENSGALG00000002127	LSM10	100	72.358	ENSPPYG00000001539	LSM10	100	72.358	Pongo_abelii
ENSGALG00000002127	LSM10	97	73.109	ENSPCAG00000002520	LSM10	98	73.109	Procavia_capensis
ENSGALG00000002127	LSM10	100	72.358	ENSPVAG00000008644	LSM10	100	72.358	Pteropus_vampyrus
ENSGALG00000002127	LSM10	95	65.812	ENSPNYG00000003138	oscp1a	95	65.812	Pundamilia_nyererei
ENSGALG00000002127	LSM10	95	64.957	ENSPNAG00000028829	oscp1a	97	64.957	Pygocentrus_nattereri
ENSGALG00000002127	LSM10	98	72.727	ENSRNOG00000025716	Lsm10	99	72.727	Rattus_norvegicus
ENSGALG00000002127	LSM10	100	71.545	ENSRBIG00000001561	LSM10	100	71.545	Rhinopithecus_bieti
ENSGALG00000002127	LSM10	100	71.545	ENSRROG00000011414	LSM10	100	71.545	Rhinopithecus_roxellana
ENSGALG00000002127	LSM10	100	73.171	ENSSBOG00000036413	-	100	73.171	Saimiri_boliviensis_boliviensis
ENSGALG00000002127	LSM10	100	81.301	ENSSHAG00000018056	LSM10	100	81.301	Sarcophilus_harrisii
ENSGALG00000002127	LSM10	98	68.595	ENSSFOG00015019954	lsm10	99	68.595	Scleropages_formosus
ENSGALG00000002127	LSM10	93	64.912	ENSSMAG00000001297	oscp1a	97	64.912	Scophthalmus_maximus
ENSGALG00000002127	LSM10	97	64.167	ENSSDUG00000007090	oscp1a	98	64.167	Seriola_dumerili
ENSGALG00000002127	LSM10	93	64.348	ENSSLDG00000000800	oscp1a	95	64.348	Seriola_lalandi_dorsalis
ENSGALG00000002127	LSM10	100	72.800	ENSSARG00000004211	LSM10	100	73.600	Sorex_araneus
ENSGALG00000002127	LSM10	93	66.087	ENSSPAG00000009229	oscp1a	95	66.087	Stegastes_partitus
ENSGALG00000002127	LSM10	100	73.984	ENSSSCG00000038916	LSM10	100	73.984	Sus_scrofa
ENSGALG00000002127	LSM10	99	87.705	ENSTGUG00000001600	-	100	87.705	Taeniopygia_guttata
ENSGALG00000002127	LSM10	99	88.525	ENSTGUG00000001602	-	100	88.525	Taeniopygia_guttata
ENSGALG00000002127	LSM10	99	61.475	ENSTRUG00000010531	oscp1a	98	61.475	Takifugu_rubripes
ENSGALG00000002127	LSM10	100	72.358	ENSTBEG00000016674	LSM10	100	72.358	Tupaia_belangeri
ENSGALG00000002127	LSM10	100	74.797	ENSUAMG00000020265	LSM10	100	74.797	Ursus_americanus
ENSGALG00000002127	LSM10	100	74.797	ENSUMAG00000001438	LSM10	57	74.797	Ursus_maritimus
ENSGALG00000002127	LSM10	100	73.984	ENSVVUG00000023209	LSM10	100	73.984	Vulpes_vulpes
ENSGALG00000002127	LSM10	100	70.732	ENSXETG00000027631	lsm10	100	70.732	Xenopus_tropicalis
ENSGALG00000002127	LSM10	94	66.379	ENSXCOG00000018776	oscp1a	73	66.379	Xiphophorus_couchianus
ENSGALG00000002127	LSM10	89	68.182	ENSXMAG00000019963	oscp1a	88	68.182	Xiphophorus_maculatus