EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGALG00000002139 (Gene tree)
Gene ID
419886
Gene Symbol
CSDE1
Alias
-
Full Name
Gallus gallus cold shock domain containing E1 (CSDE1)%2C mRNA.
Gene Type
protein_coding
Species
Gallus_gallus
Status
putative
Strand
Minus strand
Length
17274 bases
Position
chr26:3912642-3929915
Accession
NM_001030918
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGALP00000039235CSDPF00313.224.7e-8315
ENSGALP00000039235CSDPF00313.224.7e-8325
ENSGALP00000039235CSDPF00313.224.7e-8335
ENSGALP00000039235CSDPF00313.224.7e-8345
ENSGALP00000039235CSDPF00313.224.7e-8355
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGALT00000040028-4136XM_015298933ENSGALP00000039235794 (aa)XP_015154419E1BQF9
Gene Model
Click here to download ENSGALG00000002139's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000002139's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGALG00000002139CSDE19892.199ENSG00000009307CSDE110097.826Homo_sapiens
ENSGALG00000002139CSDE19877.363ENSAPOG00000015538csde19876.980Acanthochromis_polyacanthus
ENSGALG00000002139CSDE19887.340ENSAMEG00000017129CSDE19287.340Ailuropoda_melanoleuca
ENSGALG00000002139CSDE18880.541ENSACIG00000015175csde110080.541Amphilophus_citrinellus
ENSGALG00000002139CSDE19877.488ENSAOCG00000011510csde19876.688Amphiprion_ocellaris
ENSGALG00000002139CSDE19879.363ENSAPEG00000007194csde19877.488Amphiprion_percula
ENSGALG00000002139CSDE19876.081ENSATEG00000003864csde19876.081Anabas_testudineus
ENSGALG00000002139CSDE19895.775ENSAPLG00000008797CSDE19895.775Anas_platyrhynchos
ENSGALG00000002139CSDE19895.391ENSACAG00000003120CSDE19895.391Anolis_carolinensis
ENSGALG00000002139CSDE19892.199ENSANAG00000024665CSDE19392.199Aotus_nancymaae
ENSGALG00000002139CSDE17972.789ENSANAG00000028396-9172.789Aotus_nancymaae
ENSGALG00000002139CSDE19878.981ENSACLG00000013296csde19878.981Astatotilapia_calliptera
ENSGALG00000002139CSDE19875.095ENSAMXG00000007436csde19875.095Astyanax_mexicanus
ENSGALG00000002139CSDE19891.688ENSBTAG00000000678CSDE19887.724Bos_taurus
ENSGALG00000002139CSDE19892.327ENSCJAG00000012565CSDE19392.327Callithrix_jacchus
ENSGALG00000002139CSDE19888.363ENSCAFG00000009618CSDE19488.363Canis_familiaris
ENSGALG00000002139CSDE19888.363ENSCAFG00020000481CSDE19888.363Canis_lupus_dingo
ENSGALG00000002139CSDE19891.816ENSCHIG00000017250CSDE19887.852Capra_hircus
ENSGALG00000002139CSDE19892.199ENSTSYG00000003747CSDE19892.199Carlito_syrichta
ENSGALG00000002139CSDE19893.865ENSCAPG00000015128CSDE19893.865Cavia_aperea
ENSGALG00000002139CSDE19886.829ENSCPOG00000040388CSDE19886.829Cavia_porcellus
ENSGALG00000002139CSDE19666.337ENSCCAG00000033677-9966.271Cebus_capucinus
ENSGALG00000002139CSDE19565.358ENSCCAG00000030878-8865.358Cebus_capucinus
ENSGALG00000002139CSDE19892.327ENSCCAG00000036794CSDE19892.327Cebus_capucinus
ENSGALG00000002139CSDE19892.199ENSCATG00000036962CSDE19392.199Cercocebus_atys
ENSGALG00000002139CSDE19892.072ENSCLAG00000006618CSDE19892.072Chinchilla_lanigera
ENSGALG00000002139CSDE19892.199ENSCSAG00000001658CSDE19392.199Chlorocebus_sabaeus
ENSGALG00000002139CSDE19396.117ENSCHOG00000000918CSDE17796.117Choloepus_hoffmanni
ENSGALG00000002139CSDE19895.519ENSCPBG00000016547CSDE19895.519Chrysemys_picta_bellii
ENSGALG00000002139CSDE19642.662ENSCING00000014465-9542.662Ciona_intestinalis
ENSGALG00000002139CSDE19642.289ENSCSAVG00000008100-9842.289Ciona_savignyi
ENSGALG00000002139CSDE19093.585ENSCANG00000031069-9393.585Colobus_angolensis_palliatus
ENSGALG00000002139CSDE19892.199ENSCANG00000035096CSDE19392.199Colobus_angolensis_palliatus
ENSGALG00000002139CSDE19872.379ENSCGRG00001014011-9872.379Cricetulus_griseus_chok1gshd
ENSGALG00000002139CSDE19891.560ENSCGRG00001016833-9891.560Cricetulus_griseus_chok1gshd
ENSGALG00000002139CSDE19873.563ENSCGRG00000005831-9873.563Cricetulus_griseus_crigri
ENSGALG00000002139CSDE19687.298ENSCGRG00000002225-9687.298Cricetulus_griseus_crigri
ENSGALG00000002139CSDE19975.583ENSCSEG00000002620csde19875.287Cynoglossus_semilaevis
ENSGALG00000002139CSDE19878.854ENSCVAG00000001344csde19878.454Cyprinodon_variegatus
ENSGALG00000002139CSDE19978.967ENSDARG00000074758csde110078.571Danio_rerio
ENSGALG00000002139CSDE19888.123ENSDNOG00000010287-9188.123Dasypus_novemcinctus
ENSGALG00000002139CSDE19891.432ENSDORG00000011609Csde19891.432Dipodomys_ordii
ENSGALG00000002139CSDE19549.380FBgn0263352Unr7548.594Drosophila_melanogaster
ENSGALG00000002139CSDE19795.868ENSETEG00000002491-7295.868Echinops_telfairi
ENSGALG00000002139CSDE17463.946ENSETEG00000007109-9763.946Echinops_telfairi
ENSGALG00000002139CSDE19177.979ENSETEG00000006280-10077.979Echinops_telfairi
ENSGALG00000002139CSDE19869.231ENSETEG00000013678-9869.231Echinops_telfairi
ENSGALG00000002139CSDE19955.487ENSEBUG00000008647csde19953.763Eptatretus_burgeri
ENSGALG00000002139CSDE19892.327ENSEASG00005006284CSDE19892.327Equus_asinus_asinus
ENSGALG00000002139CSDE19892.327ENSECAG00000020885CSDE19892.327Equus_caballus
ENSGALG00000002139CSDE19392.147ENSEEUG00000006286CSDE16892.147Erinaceus_europaeus
ENSGALG00000002139CSDE19875.400ENSELUG00000015507csde19874.018Esox_lucius
ENSGALG00000002139CSDE19892.199ENSFCAG00000029266CSDE19888.235Felis_catus
ENSGALG00000002139CSDE19898.592ENSFALG00000003407CSDE19898.592Ficedula_albicollis
ENSGALG00000002139CSDE19891.816ENSFDAG00000007882CSDE19891.816Fukomys_damarensis
ENSGALG00000002139CSDE19878.753ENSFHEG00000010799csde19878.753Fundulus_heteroclitus
ENSGALG00000002139CSDE19878.217ENSGMOG00000012731csde19878.217Gadus_morhua
ENSGALG00000002139CSDE19375.546ENSGAFG00000005241csde19575.546Gambusia_affinis
ENSGALG00000002139CSDE19879.517ENSGACG00000004544csde19879.517Gasterosteus_aculeatus
ENSGALG00000002139CSDE19895.519ENSGAGG00000017685CSDE19895.519Gopherus_agassizii
ENSGALG00000002139CSDE19892.199ENSGGOG00000002164CSDE19988.107Gorilla_gorilla
ENSGALG00000002139CSDE19878.327ENSHBUG00000020315csde19876.306Haplochromis_burtoni
ENSGALG00000002139CSDE19879.028ENSHGLG00000003829-9879.028Heterocephalus_glaber_female
ENSGALG00000002139CSDE19976.981ENSHGLG00000007471-9876.981Heterocephalus_glaber_female
ENSGALG00000002139CSDE19883.248ENSHGLG00000009620-9883.504Heterocephalus_glaber_female
ENSGALG00000002139CSDE19876.982ENSHGLG00000019549-9876.982Heterocephalus_glaber_female
ENSGALG00000002139CSDE19781.481ENSHGLG00000008555-9781.481Heterocephalus_glaber_female
ENSGALG00000002139CSDE19578.984ENSHGLG00000010039-9678.984Heterocephalus_glaber_female
ENSGALG00000002139CSDE19973.770ENSHGLG00000000650-9973.770Heterocephalus_glaber_female
ENSGALG00000002139CSDE19974.749ENSHGLG00100007287-9874.749Heterocephalus_glaber_male
ENSGALG00000002139CSDE19891.944ENSHGLG00100019438-9891.944Heterocephalus_glaber_male
ENSGALG00000002139CSDE19579.215ENSHGLG00100006910-9679.215Heterocephalus_glaber_male
ENSGALG00000002139CSDE19572.286ENSHGLG00100004833-9672.286Heterocephalus_glaber_male
ENSGALG00000002139CSDE19874.425ENSHGLG00100012072-9874.425Heterocephalus_glaber_male
ENSGALG00000002139CSDE19474.933ENSHGLG00100004195-10074.933Heterocephalus_glaber_male
ENSGALG00000002139CSDE19978.113ENSHGLG00100002245-9978.113Heterocephalus_glaber_male
ENSGALG00000002139CSDE19871.995ENSHGLG00100001846-9871.995Heterocephalus_glaber_male
ENSGALG00000002139CSDE19877.197ENSHCOG00000004158csde19874.522Hippocampus_comes
ENSGALG00000002139CSDE19874.841ENSIPUG00000000355csde19874.841Ictalurus_punctatus
ENSGALG00000002139CSDE19874.746ENSSTOG00000030994-9874.746Ictidomys_tridecemlineatus
ENSGALG00000002139CSDE18677.756ENSSTOG00000032722-9877.756Ictidomys_tridecemlineatus
ENSGALG00000002139CSDE19891.816ENSJJAG00000019571Csde19891.816Jaculus_jaculus
ENSGALG00000002139CSDE19878.228ENSKMAG00000005685csde19877.834Kryptolebias_marmoratus
ENSGALG00000002139CSDE19877.391ENSLBEG00000014770csde19876.590Labrus_bergylta
ENSGALG00000002139CSDE19979.825ENSLACG00000018452CSDE19379.825Latimeria_chalumnae
ENSGALG00000002139CSDE19881.586ENSLOCG00000010413csde19281.586Lepisosteus_oculatus
ENSGALG00000002139CSDE19887.980ENSLAFG00000007150CSDE19487.980Loxodonta_africana
ENSGALG00000002139CSDE19892.199ENSMFAG00000003674CSDE19888.235Macaca_fascicularis
ENSGALG00000002139CSDE19892.199ENSMMUG00000001974CSDE19988.076Macaca_mulatta
ENSGALG00000002139CSDE19892.199ENSMNEG00000045247CSDE19392.199Macaca_nemestrina
ENSGALG00000002139CSDE19891.944ENSMLEG00000038673CSDE19391.944Mandrillus_leucophaeus
ENSGALG00000002139CSDE19878.109ENSMAMG00000008821csde19877.197Mastacembelus_armatus
ENSGALG00000002139CSDE19878.981ENSMZEG00005021675csde19876.306Maylandia_zebra
ENSGALG00000002139CSDE110099.622ENSMGAG00000016381CSDE110099.622Meleagris_gallopavo
ENSGALG00000002139CSDE19891.560ENSMAUG00000014031Csde19891.560Mesocricetus_auratus
ENSGALG00000002139CSDE19891.432ENSMICG00000002050CSDE19391.432Microcebus_murinus
ENSGALG00000002139CSDE19891.560ENSMOCG00000018960Csde19891.560Microtus_ochrogaster
ENSGALG00000002139CSDE19876.209ENSMMOG00000015075csde19876.209Mola_mola
ENSGALG00000002139CSDE19892.967ENSMODG00000004685CSDE19892.967Monodelphis_domestica
ENSGALG00000002139CSDE19876.463ENSMALG00000007132csde19876.463Monopterus_albus
ENSGALG00000002139CSDE19891.688MGP_CAROLIEiJ_G0025444Csde19797.260Mus_caroli
ENSGALG00000002139CSDE19891.560ENSMUSG00000068823Csde19797.260Mus_musculus
ENSGALG00000002139CSDE19891.560MGP_PahariEiJ_G0026888Csde19797.260Mus_pahari
ENSGALG00000002139CSDE19891.560MGP_SPRETEiJ_G0026394Csde19797.260Mus_spretus
ENSGALG00000002139CSDE19892.199ENSMPUG00000005753CSDE19992.199Mustela_putorius_furo
ENSGALG00000002139CSDE19887.596ENSMLUG00000005681CSDE19287.596Myotis_lucifugus
ENSGALG00000002139CSDE19891.432ENSNGAG00000021929Csde19891.432Nannospalax_galili
ENSGALG00000002139CSDE19562.818ENSNGAG00000012599-9662.818Nannospalax_galili
ENSGALG00000002139CSDE19876.306ENSNBRG00000020808csde19876.306Neolamprologus_brichardi
ENSGALG00000002139CSDE19892.072ENSNLEG00000004842CSDE19392.072Nomascus_leucogenys
ENSGALG00000002139CSDE19898.058ENSMEUG00000002677CSDE19598.058Notamacropus_eugenii
ENSGALG00000002139CSDE19896.117ENSOPRG00000005002CSDE17696.117Ochotona_princeps
ENSGALG00000002139CSDE19891.560ENSODEG00000007383-9891.560Octodon_degus
ENSGALG00000002139CSDE19559.862ENSODEG00000005979-9459.862Octodon_degus
ENSGALG00000002139CSDE19877.114ENSONIG00000009309csde19877.114Oreochromis_niloticus
ENSGALG00000002139CSDE19877.255ENSOANG00000003346-9877.255Ornithorhynchus_anatinus
ENSGALG00000002139CSDE19891.560ENSOCUG00000016438CSDE19391.560Oryctolagus_cuniculus
ENSGALG00000002139CSDE19877.210ENSORLG00000000707csde19877.210Oryzias_latipes
ENSGALG00000002139CSDE19878.827ENSORLG00020005148csde19876.961Oryzias_latipes_hni
ENSGALG00000002139CSDE19878.827ENSORLG00015019415csde19876.961Oryzias_latipes_hsok
ENSGALG00000002139CSDE19878.854ENSOMEG00000015656csde19876.990Oryzias_melastigma
ENSGALG00000002139CSDE19888.363ENSOGAG00000012127CSDE19288.363Otolemur_garnettii
ENSGALG00000002139CSDE19887.852ENSOARG00000020034CSDE19287.852Ovis_aries
ENSGALG00000002139CSDE19892.199ENSPPAG00000025861CSDE19888.235Pan_paniscus
ENSGALG00000002139CSDE19892.199ENSPPRG00000006747CSDE19392.199Panthera_pardus
ENSGALG00000002139CSDE19892.199ENSPTIG00000015468CSDE19892.199Panthera_tigris_altaica
ENSGALG00000002139CSDE19892.199ENSPTRG00000033721CSDE19892.199Pan_troglodytes
ENSGALG00000002139CSDE19892.199ENSPANG00000018873CSDE19888.235Papio_anubis
ENSGALG00000002139CSDE19875.128ENSPKIG00000009459csde19875.128Paramormyrops_kingsleyae
ENSGALG00000002139CSDE19996.667ENSPSIG00000003823CSDE19696.667Pelodiscus_sinensis
ENSGALG00000002139CSDE19875.541ENSPMGG00000000772csde19875.541Periophthalmus_magnuspinnatus
ENSGALG00000002139CSDE19891.688ENSPEMG00000020357-9891.688Peromyscus_maniculatus_bairdii
ENSGALG00000002139CSDE19893.223ENSPCIG00000022587CSDE19893.223Phascolarctos_cinereus
ENSGALG00000002139CSDE19977.188ENSPFOG00000012664csde110077.188Poecilia_formosa
ENSGALG00000002139CSDE19773.313ENSPLAG00000017680csde19373.313Poecilia_latipinna
ENSGALG00000002139CSDE19773.313ENSPMEG00000005094csde19573.313Poecilia_mexicana
ENSGALG00000002139CSDE19878.354ENSPREG00000011631csde19876.039Poecilia_reticulata
ENSGALG00000002139CSDE19892.072ENSPPYG00000000996CSDE19892.072Pongo_abelii
ENSGALG00000002139CSDE19897.087ENSPCAG00000014368CSDE18897.087Procavia_capensis
ENSGALG00000002139CSDE19891.944ENSPCOG00000017893CSDE19891.944Propithecus_coquereli
ENSGALG00000002139CSDE19081.716ENSPCOG00000008223-9081.716Propithecus_coquereli
ENSGALG00000002139CSDE19387.669ENSPVAG00000008225CSDE18787.669Pteropus_vampyrus
ENSGALG00000002139CSDE19878.327ENSPNYG00000013745csde19876.306Pundamilia_nyererei
ENSGALG00000002139CSDE19878.626ENSPNAG00000001958csde19875.827Pygocentrus_nattereri
ENSGALG00000002139CSDE19891.432ENSRNOG00000061058Csde19891.432Rattus_norvegicus
ENSGALG00000002139CSDE19886.514ENSRBIG00000038966-9286.514Rhinopithecus_bieti
ENSGALG00000002139CSDE19888.747ENSRBIG00000038088-9887.600Rhinopithecus_bieti
ENSGALG00000002139CSDE19892.199ENSRROG00000043101CSDE19392.199Rhinopithecus_roxellana
ENSGALG00000002139CSDE19892.327ENSSBOG00000035592CSDE19392.327Saimiri_boliviensis_boliviensis
ENSGALG00000002139CSDE19889.130ENSSHAG00000009831CSDE19889.130Sarcophilus_harrisii
ENSGALG00000002139CSDE19878.454ENSSFOG00015007498csde19878.707Scleropages_formosus
ENSGALG00000002139CSDE19877.239ENSSMAG00000007203csde19877.239Scophthalmus_maximus
ENSGALG00000002139CSDE19877.488ENSSDUG00000015380csde19876.688Seriola_dumerili
ENSGALG00000002139CSDE19879.363ENSSLDG00000008819csde19879.363Seriola_lalandi_dorsalis
ENSGALG00000002139CSDE19887.980ENSSARG00000000738CSDE19287.980Sorex_araneus
ENSGALG00000002139CSDE19996.684ENSSPUG00000008714CSDE19896.684Sphenodon_punctatus
ENSGALG00000002139CSDE19879.618ENSSPAG00000000716csde19876.943Stegastes_partitus
ENSGALG00000002139CSDE19892.199ENSSSCG00000006752CSDE19888.235Sus_scrofa
ENSGALG00000002139CSDE19897.446ENSTGUG00000000972CSDE19897.446Taeniopygia_guttata
ENSGALG00000002139CSDE19873.946ENSTRUG00000007996csde19873.946Takifugu_rubripes
ENSGALG00000002139CSDE19383.270ENSTNIG00000010878csde110083.270Tetraodon_nigroviridis
ENSGALG00000002139CSDE18096.154ENSTBEG00000011880-5896.154Tupaia_belangeri
ENSGALG00000002139CSDE19887.852ENSTTRG00000015583CSDE19287.852Tursiops_truncatus
ENSGALG00000002139CSDE19082.975ENSUAMG00000024289-9982.975Ursus_americanus
ENSGALG00000002139CSDE18695.710ENSUAMG00000021779-9795.710Ursus_americanus
ENSGALG00000002139CSDE19687.160ENSUMAG00000011714-9587.160Ursus_maritimus
ENSGALG00000002139CSDE19881.202ENSUMAG00000009720-9581.202Ursus_maritimus
ENSGALG00000002139CSDE19891.878ENSVPAG00000000749CSDE17791.878Vicugna_pacos
ENSGALG00000002139CSDE19191.959ENSVVUG00000009890CSDE19491.959Vulpes_vulpes
ENSGALG00000002139CSDE19885.751ENSXETG00000021448csde19885.751Xenopus_tropicalis
ENSGALG00000002139CSDE19387.273ENSXCOG00000000035csde18587.273Xiphophorus_couchianus
ENSGALG00000002139CSDE19879.363ENSXMAG00000009080csde19976.299Xiphophorus_maculatus

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