EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000002167 (Gene tree)
Gene ID: 415327
Gene Symbol: PATL2
Alias: Pat1a
Full Name: PAT1 homolog 2
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 6376 bases
Position: chr10:1778245-1784620
Accession: 33630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000003392	PAT1	PF09770.9	8.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000003397	PATL2-201	3099	-	ENSGALP00000003392	781 (aa)	-	F1NXG9

Gene Model

Click here to download ENSGALG00000002167's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000002167's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000002167	PATL2	57	53.675	ENSG00000229474	PATL2	99	55.556	Homo_sapiens
ENSGALG00000002167	PATL2	55	49.779	ENSAPOG00000022988	patl2	63	48.630	Acanthochromis_polyacanthus
ENSGALG00000002167	PATL2	50	38.272	ENSAPOG00000021290	patl1	62	36.730	Acanthochromis_polyacanthus
ENSGALG00000002167	PATL2	57	53.468	ENSAMEG00000014997	PATL2	84	52.573	Ailuropoda_melanoleuca
ENSGALG00000002167	PATL2	50	37.965	ENSACIG00000005182	patl1	61	35.957	Amphilophus_citrinellus
ENSGALG00000002167	PATL2	83	41.026	ENSAOCG00000023738	patl2	76	39.879	Amphiprion_ocellaris
ENSGALG00000002167	PATL2	61	47.648	ENSAPEG00000011299	patl2	85	42.504	Amphiprion_percula
ENSGALG00000002167	PATL2	50	37.956	ENSAPEG00000021391	patl1	56	36.441	Amphiprion_percula
ENSGALG00000002167	PATL2	54	51.163	ENSATEG00000019567	patl2	65	51.163	Anabas_testudineus
ENSGALG00000002167	PATL2	57	36.933	ENSATEG00000002230	patl1	55	36.501	Anabas_testudineus
ENSGALG00000002167	PATL2	85	78.625	ENSAPLG00000003980	PATL2	99	87.475	Anas_platyrhynchos
ENSGALG00000002167	PATL2	59	36.031	ENSACAG00000006607	PATL1	64	36.640	Anolis_carolinensis
ENSGALG00000002167	PATL2	57	53.020	ENSANAG00000022701	PATL2	81	52.125	Aotus_nancymaae
ENSGALG00000002167	PATL2	83	41.617	ENSACLG00000010326	patl2	81	41.617	Astatotilapia_calliptera
ENSGALG00000002167	PATL2	50	37.931	ENSACLG00000005144	patl1	54	36.017	Astatotilapia_calliptera
ENSGALG00000002167	PATL2	91	49.585	ENSAMXG00000020293	patl2	65	50.562	Astyanax_mexicanus
ENSGALG00000002167	PATL2	50	37.562	ENSAMXG00000010731	patl1	59	35.320	Astyanax_mexicanus
ENSGALG00000002167	PATL2	57	52.667	ENSCJAG00000002379	PATL2	81	51.778	Callithrix_jacchus
ENSGALG00000002167	PATL2	57	54.788	ENSCAFG00000013629	PATL2	82	53.898	Canis_familiaris
ENSGALG00000002167	PATL2	53	37.330	ENSCAFG00020001648	PATL1	60	36.853	Canis_lupus_dingo
ENSGALG00000002167	PATL2	57	54.788	ENSCAFG00020022169	PATL2	81	53.898	Canis_lupus_dingo
ENSGALG00000002167	PATL2	57	52.902	ENSCHIG00000026665	PATL2	83	52.902	Capra_hircus
ENSGALG00000002167	PATL2	57	52.784	ENSTSYG00000032456	PATL2	81	52.125	Carlito_syrichta
ENSGALG00000002167	PATL2	71	38.849	ENSCAPG00000013668	PATL1	53	39.423	Cavia_aperea
ENSGALG00000002167	PATL2	74	38.532	ENSCPOG00000006827	PATL1	54	38.532	Cavia_porcellus
ENSGALG00000002167	PATL2	53	52.113	ENSCPOG00000002922	PATL2	81	51.294	Cavia_porcellus
ENSGALG00000002167	PATL2	57	52.339	ENSCCAG00000025261	PATL2	82	51.448	Cebus_capucinus
ENSGALG00000002167	PATL2	57	54.343	ENSCATG00000034794	PATL2	99	55.840	Cercocebus_atys
ENSGALG00000002167	PATL2	53	51.559	ENSCLAG00000014407	PATL2	81	50.240	Chinchilla_lanigera
ENSGALG00000002167	PATL2	71	38.462	ENSCLAG00000003427	PATL1	54	38.462	Chinchilla_lanigera
ENSGALG00000002167	PATL2	57	54.120	ENSCSAG00000009601	PATL2	81	53.229	Chlorocebus_sabaeus
ENSGALG00000002167	PATL2	76	68.439	ENSCPBG00000006150	PATL2	82	76.411	Chrysemys_picta_bellii
ENSGALG00000002167	PATL2	57	54.139	ENSCANG00000013856	PATL2	81	53.244	Colobus_angolensis_palliatus
ENSGALG00000002167	PATL2	53	51.306	ENSCGRG00001010801	Patl2	82	51.306	Cricetulus_griseus_chok1gshd
ENSGALG00000002167	PATL2	53	51.306	ENSCGRG00000013007	Patl2	82	51.306	Cricetulus_griseus_crigri
ENSGALG00000002167	PATL2	50	38.308	ENSCSEG00000008261	patl1	63	35.256	Cynoglossus_semilaevis
ENSGALG00000002167	PATL2	83	42.879	ENSCSEG00000009438	patl2	83	42.879	Cynoglossus_semilaevis
ENSGALG00000002167	PATL2	54	44.598	ENSCVAG00000016203	patl2	66	44.804	Cyprinodon_variegatus
ENSGALG00000002167	PATL2	50	35.821	ENSCVAG00000006664	patl1	61	33.761	Cyprinodon_variegatus
ENSGALG00000002167	PATL2	60	50.104	ENSDARG00000089567	patl2	64	49.890	Danio_rerio
ENSGALG00000002167	PATL2	57	35.230	ENSDARG00000017423	patl1	57	35.230	Danio_rerio
ENSGALG00000002167	PATL2	57	54.120	ENSDNOG00000036837	PATL2	76	53.229	Dasypus_novemcinctus
ENSGALG00000002167	PATL2	60	35.150	ENSDNOG00000038865	PATL1	80	37.363	Dasypus_novemcinctus
ENSGALG00000002167	PATL2	53	54.197	ENSDORG00000026649	Patl2	81	53.477	Dipodomys_ordii
ENSGALG00000002167	PATL2	57	51.339	ENSEASG00005017984	PATL2	80	50.783	Equus_asinus_asinus
ENSGALG00000002167	PATL2	57	53.348	ENSECAG00000013462	PATL2	81	52.679	Equus_caballus
ENSGALG00000002167	PATL2	50	37.811	ENSELUG00000024249	patl1	55	37.558	Esox_lucius
ENSGALG00000002167	PATL2	60	50.103	ENSELUG00000023244	patl2	62	49.891	Esox_lucius
ENSGALG00000002167	PATL2	57	53.007	ENSFCAG00000027170	PATL2	82	53.007	Felis_catus
ENSGALG00000002167	PATL2	97	67.575	ENSFALG00000009768	PATL2	99	67.366	Ficedula_albicollis
ENSGALG00000002167	PATL2	60	36.381	ENSFALG00000012150	PATL1	64	37.271	Ficedula_albicollis
ENSGALG00000002167	PATL2	53	51.313	ENSFDAG00000012242	PATL2	81	50.238	Fukomys_damarensis
ENSGALG00000002167	PATL2	56	49.206	ENSGMOG00000005666	patl2	100	48.299	Gadus_morhua
ENSGALG00000002167	PATL2	60	36.673	ENSGALG00000042641	PATL1	64	37.576	Gallus_gallus
ENSGALG00000002167	PATL2	97	39.748	ENSGAFG00000019344	patl2	82	42.082	Gambusia_affinis
ENSGALG00000002167	PATL2	50	38.000	ENSGAFG00000006508	patl1	56	36.481	Gambusia_affinis
ENSGALG00000002167	PATL2	51	37.260	ENSGACG00000016448	patl1	60	36.910	Gasterosteus_aculeatus
ENSGALG00000002167	PATL2	61	34.637	ENSGAGG00000004461	PATL1	59	38.499	Gopherus_agassizii
ENSGALG00000002167	PATL2	57	53.675	ENSGGOG00000025923	PATL2	81	52.784	Gorilla_gorilla
ENSGALG00000002167	PATL2	50	37.931	ENSHBUG00000005365	patl1	54	36.017	Haplochromis_burtoni
ENSGALG00000002167	PATL2	62	48.207	ENSHBUG00000005929	patl2	77	48.207	Haplochromis_burtoni
ENSGALG00000002167	PATL2	53	50.469	ENSHGLG00000017415	-	82	49.647	Heterocephalus_glaber_female
ENSGALG00000002167	PATL2	97	32.203	ENSHGLG00000018173	PATL1	53	39.467	Heterocephalus_glaber_female
ENSGALG00000002167	PATL2	97	31.363	ENSHGLG00100003453	PATL1	54	39.467	Heterocephalus_glaber_male
ENSGALG00000002167	PATL2	53	50.467	ENSHGLG00100008419	-	82	49.180	Heterocephalus_glaber_male
ENSGALG00000002167	PATL2	50	37.408	ENSHCOG00000001898	patl1	56	36.211	Hippocampus_comes
ENSGALG00000002167	PATL2	63	46.289	ENSHCOG00000016754	patl2	61	50.000	Hippocampus_comes
ENSGALG00000002167	PATL2	91	50.208	ENSIPUG00000020692	patl2	92	50.554	Ictalurus_punctatus
ENSGALG00000002167	PATL2	58	52.183	ENSSTOG00000033848	PATL2	83	51.310	Ictidomys_tridecemlineatus
ENSGALG00000002167	PATL2	83	41.239	ENSKMAG00000021275	patl2	80	41.317	Kryptolebias_marmoratus
ENSGALG00000002167	PATL2	50	38.710	ENSKMAG00000020848	patl1	54	36.266	Kryptolebias_marmoratus
ENSGALG00000002167	PATL2	83	41.592	ENSLBEG00000022344	patl2	79	41.141	Labrus_bergylta
ENSGALG00000002167	PATL2	52	38.242	ENSLBEG00000023617	patl1	54	36.786	Labrus_bergylta
ENSGALG00000002167	PATL2	99	43.705	ENSLACG00000005291	-	93	51.440	Latimeria_chalumnae
ENSGALG00000002167	PATL2	60	32.115	ENSLACG00000004640	PATL1	67	32.245	Latimeria_chalumnae
ENSGALG00000002167	PATL2	50	37.255	ENSLOCG00000000717	patl1	52	37.255	Lepisosteus_oculatus
ENSGALG00000002167	PATL2	52	52.632	ENSLAFG00000031124	PATL2	79	52.632	Loxodonta_africana
ENSGALG00000002167	PATL2	57	54.566	ENSMFAG00000003565	PATL2	81	53.675	Macaca_fascicularis
ENSGALG00000002167	PATL2	57	54.343	ENSMNEG00000034510	PATL2	81	53.452	Macaca_nemestrina
ENSGALG00000002167	PATL2	57	54.120	ENSMLEG00000042248	PATL2	81	53.229	Mandrillus_leucophaeus
ENSGALG00000002167	PATL2	54	50.935	ENSMAMG00000013327	patl2	65	50.935	Mastacembelus_armatus
ENSGALG00000002167	PATL2	50	38.686	ENSMAMG00000003950	patl1	59	36.402	Mastacembelus_armatus
ENSGALG00000002167	PATL2	83	41.617	ENSMZEG00005014292	patl2	81	41.617	Maylandia_zebra
ENSGALG00000002167	PATL2	50	37.931	ENSMZEG00005013404	patl1	54	36.017	Maylandia_zebra
ENSGALG00000002167	PATL2	79	95.161	ENSMGAG00000001309	PATL2	99	95.122	Meleagris_gallopavo
ENSGALG00000002167	PATL2	52	35.532	ENSMGAG00000003406	PATL1	60	36.574	Meleagris_gallopavo
ENSGALG00000002167	PATL2	53	53.333	ENSMAUG00000001008	Patl2	80	53.333	Mesocricetus_auratus
ENSGALG00000002167	PATL2	50	34.450	ENSMICG00000004172	PATL1	52	34.917	Microcebus_murinus
ENSGALG00000002167	PATL2	52	52.068	ENSMOCG00000015367	Patl2	78	52.068	Microtus_ochrogaster
ENSGALG00000002167	PATL2	57	35.593	ENSMMOG00000013711	patl1	64	36.009	Mola_mola
ENSGALG00000002167	PATL2	58	42.549	ENSMMOG00000001299	patl2	69	42.117	Mola_mola
ENSGALG00000002167	PATL2	58	53.173	ENSMODG00000017690	PATL2	81	53.173	Monodelphis_domestica
ENSGALG00000002167	PATL2	59	36.731	ENSMODG00000020201	PATL1	56	39.540	Monodelphis_domestica
ENSGALG00000002167	PATL2	97	39.697	ENSMALG00000008131	patl2	87	39.589	Monopterus_albus
ENSGALG00000002167	PATL2	52	52.267	MGP_CAROLIEiJ_G0024205	Patl2	79	52.267	Mus_caroli
ENSGALG00000002167	PATL2	51	51.951	ENSMUSG00000027233	Patl2	77	51.951	Mus_musculus
ENSGALG00000002167	PATL2	52	52.278	MGP_PahariEiJ_G0025648	Patl2	78	52.758	Mus_pahari
ENSGALG00000002167	PATL2	52	52.257	MGP_SPRETEiJ_G0025122	Patl2	79	50.831	Mus_spretus
ENSGALG00000002167	PATL2	53	46.404	ENSNGAG00000020368	Patl2	83	44.843	Nannospalax_galili
ENSGALG00000002167	PATL2	62	48.790	ENSNBRG00000011745	patl2	72	48.790	Neolamprologus_brichardi
ENSGALG00000002167	PATL2	57	53.675	ENSNLEG00000005673	PATL2	82	53.675	Nomascus_leucogenys
ENSGALG00000002167	PATL2	50	37.931	ENSONIG00000004170	patl1	61	34.904	Oreochromis_niloticus
ENSGALG00000002167	PATL2	83	41.256	ENSONIG00000011519	patl2	62	50.214	Oreochromis_niloticus
ENSGALG00000002167	PATL2	55	52.154	ENSOANG00000001538	-	98	51.487	Ornithorhynchus_anatinus
ENSGALG00000002167	PATL2	51	53.563	ENSOCUG00000006339	PATL2	79	52.826	Oryctolagus_cuniculus
ENSGALG00000002167	PATL2	61	48.473	ENSORLG00000005780	patl2	79	41.478	Oryzias_latipes
ENSGALG00000002167	PATL2	58	49.163	ENSORLG00020016506	patl2	77	41.629	Oryzias_latipes_hni
ENSGALG00000002167	PATL2	61	48.473	ENSORLG00015014500	patl2	79	41.478	Oryzias_latipes_hsok
ENSGALG00000002167	PATL2	50	52.826	ENSOMEG00000021628	patl2	92	38.773	Oryzias_melastigma
ENSGALG00000002167	PATL2	57	50.220	ENSOGAG00000004709	PATL2	82	50.220	Otolemur_garnettii
ENSGALG00000002167	PATL2	53	52.471	ENSOARG00000003762	PATL2	79	51.529	Ovis_aries
ENSGALG00000002167	PATL2	57	53.675	ENSPPAG00000007221	PATL2	80	52.784	Pan_paniscus
ENSGALG00000002167	PATL2	57	53.007	ENSPPRG00000004279	PATL2	82	53.007	Panthera_pardus
ENSGALG00000002167	PATL2	57	53.229	ENSPTIG00000018964	PATL2	82	53.229	Panthera_tigris_altaica
ENSGALG00000002167	PATL2	57	53.675	ENSPTRG00000041536	PATL2	80	52.784	Pan_troglodytes
ENSGALG00000002167	PATL2	57	54.343	ENSPANG00000018026	PATL2	81	53.452	Papio_anubis
ENSGALG00000002167	PATL2	73	49.901	ENSPKIG00000016887	patl2	79	51.489	Paramormyrops_kingsleyae
ENSGALG00000002167	PATL2	50	38.308	ENSPKIG00000016224	patl1	60	35.358	Paramormyrops_kingsleyae
ENSGALG00000002167	PATL2	61	71.127	ENSPSIG00000017690	PATL2	97	69.114	Pelodiscus_sinensis
ENSGALG00000002167	PATL2	60	36.981	ENSPSIG00000016206	PATL1	61	37.500	Pelodiscus_sinensis
ENSGALG00000002167	PATL2	50	40.000	ENSPMGG00000002644	patl1	58	38.330	Periophthalmus_magnuspinnatus
ENSGALG00000002167	PATL2	58	46.695	ENSPMGG00000014550	patl2	67	48.387	Periophthalmus_magnuspinnatus
ENSGALG00000002167	PATL2	51	53.000	ENSPEMG00000016509	Patl2	79	50.839	Peromyscus_maniculatus_bairdii
ENSGALG00000002167	PATL2	55	52.174	ENSPCIG00000018256	PATL2	87	51.259	Phascolarctos_cinereus
ENSGALG00000002167	PATL2	97	32.683	ENSPCIG00000010852	PATL1	98	31.325	Phascolarctos_cinereus
ENSGALG00000002167	PATL2	50	37.438	ENSPFOG00000007768	patl1	58	34.542	Poecilia_formosa
ENSGALG00000002167	PATL2	97	38.946	ENSPFOG00000007305	patl2	81	41.456	Poecilia_formosa
ENSGALG00000002167	PATL2	50	38.119	ENSPLAG00000018465	patl1	56	35.608	Poecilia_latipinna
ENSGALG00000002167	PATL2	97	38.946	ENSPLAG00000020713	patl2	81	41.456	Poecilia_latipinna
ENSGALG00000002167	PATL2	50	38.119	ENSPMEG00000006555	patl1	56	35.118	Poecilia_mexicana
ENSGALG00000002167	PATL2	97	39.075	ENSPMEG00000018942	patl2	81	41.456	Poecilia_mexicana
ENSGALG00000002167	PATL2	86	35.549	ENSPREG00000023066	patl2	85	37.268	Poecilia_reticulata
ENSGALG00000002167	PATL2	56	53.708	ENSPCOG00000000295	PATL2	99	53.846	Propithecus_coquereli
ENSGALG00000002167	PATL2	61	48.765	ENSPNYG00000017381	patl2	74	47.677	Pundamilia_nyererei
ENSGALG00000002167	PATL2	50	38.060	ENSPNAG00000017907	patl1	51	38.060	Pygocentrus_nattereri
ENSGALG00000002167	PATL2	87	49.687	ENSPNAG00000002315	patl2	65	50.885	Pygocentrus_nattereri
ENSGALG00000002167	PATL2	51	51.117	ENSRNOG00000017061	Patl2	76	51.852	Rattus_norvegicus
ENSGALG00000002167	PATL2	57	53.691	ENSRBIG00000040369	PATL2	81	53.898	Rhinopithecus_bieti
ENSGALG00000002167	PATL2	57	53.915	ENSRROG00000028786	PATL2	81	54.120	Rhinopithecus_roxellana
ENSGALG00000002167	PATL2	57	52.455	ENSSBOG00000034766	PATL2	81	52.116	Saimiri_boliviensis_boliviensis
ENSGALG00000002167	PATL2	51	38.107	ENSSFOG00015009614	patl1	52	37.990	Scleropages_formosus
ENSGALG00000002167	PATL2	83	44.148	ENSSFOG00015000720	patl2	94	39.745	Scleropages_formosus
ENSGALG00000002167	PATL2	50	39.356	ENSSMAG00000009482	patl1	53	37.179	Scophthalmus_maximus
ENSGALG00000002167	PATL2	58	48.596	ENSSMAG00000017262	patl2	68	50.230	Scophthalmus_maximus
ENSGALG00000002167	PATL2	50	38.366	ENSSDUG00000005362	patl1	53	36.306	Seriola_dumerili
ENSGALG00000002167	PATL2	83	41.053	ENSSDUG00000022927	patl2	92	38.571	Seriola_dumerili
ENSGALG00000002167	PATL2	55	49.554	ENSSLDG00000017922	patl2	65	49.554	Seriola_lalandi_dorsalis
ENSGALG00000002167	PATL2	50	38.366	ENSSLDG00000019146	patl1	55	36.306	Seriola_lalandi_dorsalis
ENSGALG00000002167	PATL2	51	52.475	ENSSARG00000009047	PATL2	82	51.485	Sorex_araneus
ENSGALG00000002167	PATL2	59	35.742	ENSSPUG00000009453	PATL1	64	36.140	Sphenodon_punctatus
ENSGALG00000002167	PATL2	55	49.336	ENSSPAG00000004784	patl2	67	49.336	Stegastes_partitus
ENSGALG00000002167	PATL2	50	38.142	ENSSPAG00000003187	patl1	59	36.518	Stegastes_partitus
ENSGALG00000002167	PATL2	60	36.226	ENSTGUG00000006222	PATL1	64	36.531	Taeniopygia_guttata
ENSGALG00000002167	PATL2	83	42.209	ENSTRUG00000005647	patl2	80	42.057	Takifugu_rubripes
ENSGALG00000002167	PATL2	59	35.000	ENSTRUG00000000709	patl1	54	36.384	Takifugu_rubripes
ENSGALG00000002167	PATL2	57	52.561	ENSUAMG00000018533	PATL2	80	52.561	Ursus_americanus
ENSGALG00000002167	PATL2	57	52.784	ENSUMAG00000007738	PATL2	80	52.784	Ursus_maritimus
ENSGALG00000002167	PATL2	53	37.130	ENSUMAG00000018634	PATL1	72	36.217	Ursus_maritimus
ENSGALG00000002167	PATL2	57	54.788	ENSVVUG00000011576	PATL2	82	53.898	Vulpes_vulpes
ENSGALG00000002167	PATL2	53	37.330	ENSVVUG00000016668	PATL1	59	38.462	Vulpes_vulpes
ENSGALG00000002167	PATL2	91	56.713	ENSXETG00000014167	patl2	82	55.556	Xenopus_tropicalis
ENSGALG00000002167	PATL2	50	37.255	ENSXCOG00000010808	patl1	77	35.498	Xiphophorus_couchianus
ENSGALG00000002167	PATL2	97	39.186	ENSXMAG00000018464	patl2	82	40.943	Xiphophorus_maculatus
ENSGALG00000002167	PATL2	50	37.871	ENSXMAG00000013834	patl1	55	35.821	Xiphophorus_maculatus