EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000002197 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: NO38
Full Name: -
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 11514 bases
Position: chr13:4020555-4032068
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000003431	Nucleoplasmin	PF03066.15	4.7e-40	1	1
ENSGALP00000058806	Nucleoplasmin	PF03066.15	4.7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000089096	-	1242	-	ENSGALP00000058806	404 (aa)	-	F1NVA4
ENSGALT00000003436	-	1520	-	ENSGALP00000003431	403 (aa)	-	F1NVA4

Gene Model

Click here to download ENSGALG00000002197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000002197's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000002197	-	73	45.902	ENSAPOG00000004268	npm1b	98	44.918	Acanthochromis_polyacanthus
ENSGALG00000002197	-	73	45.513	ENSAOCG00000012549	npm1b	98	44.551	Amphiprion_ocellaris
ENSGALG00000002197	-	73	44.089	ENSAPEG00000000868	npm1b	98	43.269	Amphiprion_percula
ENSGALG00000002197	-	73	39.308	ENSATEG00000006254	npm1b	98	44.951	Anabas_testudineus
ENSGALG00000002197	-	73	72.848	ENSACAG00000015626	-	100	73.179	Anolis_carolinensis
ENSGALG00000002197	-	73	45.215	ENSAMXG00000042148	npm1b	97	45.548	Astyanax_mexicanus
ENSGALG00000002197	-	64	47.529	ENSCAFG00000023359	-	99	47.104	Canis_familiaris
ENSGALG00000002197	-	73	77.517	ENSCPBG00000021221	-	60	77.517	Chrysemys_picta_bellii
ENSGALG00000002197	-	73	47.213	ENSCSEG00000004530	npm1b	98	46.557	Cynoglossus_semilaevis
ENSGALG00000002197	-	73	43.137	ENSCVAG00000013016	npm1b	98	42.157	Cyprinodon_variegatus
ENSGALG00000002197	-	73	44.951	ENSDARG00000037675	npm1b	99	44.590	Danio_rerio
ENSGALG00000002197	-	69	43.581	ENSELUG00000022123	npm1b	95	41.554	Esox_lucius
ENSGALG00000002197	-	68	91.667	ENSFALG00000003320	-	94	91.667	Ficedula_albicollis
ENSGALG00000002197	-	73	43.182	ENSFHEG00000020794	npm1b	98	42.208	Fundulus_heteroclitus
ENSGALG00000002197	-	73	43.934	ENSGMOG00000002689	npm1b	97	45.017	Gadus_morhua
ENSGALG00000002197	-	73	39.667	ENSGAFG00000017709	npm1b	98	43.934	Gambusia_affinis
ENSGALG00000002197	-	73	43.667	ENSGACG00000016706	npm1b	100	45.277	Gasterosteus_aculeatus
ENSGALG00000002197	-	73	76.254	ENSGAGG00000020250	-	100	75.920	Gopherus_agassizii
ENSGALG00000002197	-	73	45.277	ENSHBUG00000019903	npm1b	94	45.928	Haplochromis_burtoni
ENSGALG00000002197	-	73	44.408	ENSHCOG00000003895	npm1b	98	44.408	Hippocampus_comes
ENSGALG00000002197	-	69	45.918	ENSIPUG00000020165	npm1b	96	45.918	Ictalurus_punctatus
ENSGALG00000002197	-	73	44.590	ENSKMAG00000008260	npm1b	99	45.246	Kryptolebias_marmoratus
ENSGALG00000002197	-	65	42.403	ENSLACG00000001779	-	99	42.403	Latimeria_chalumnae
ENSGALG00000002197	-	73	49.831	ENSLACG00000013460	-	100	51.178	Latimeria_chalumnae
ENSGALG00000002197	-	68	39.597	ENSLOCG00000001942	npm1b	99	39.465	Lepisosteus_oculatus
ENSGALG00000002197	-	51	43.891	ENSMAMG00000015335	npm1b	97	43.182	Mastacembelus_armatus
ENSGALG00000002197	-	68	97.802	ENSMGAG00000001591	-	100	97.802	Meleagris_gallopavo
ENSGALG00000002197	-	58	42.510	ENSMALG00000015383	npm1b	98	43.852	Monopterus_albus
ENSGALG00000002197	-	73	42.667	ENSONIG00000001397	npm1b	98	43.000	Oreochromis_niloticus
ENSGALG00000002197	-	68	39.209	ENSOMEG00000003414	npm1b	94	38.519	Oryzias_melastigma
ENSGALG00000002197	-	73	46.154	ENSPKIG00000020050	npm1b	98	45.541	Paramormyrops_kingsleyae
ENSGALG00000002197	-	70	77.193	ENSPSIG00000011204	-	92	77.936	Pelodiscus_sinensis
ENSGALG00000002197	-	68	40.000	ENSPMAG00000004930	npm1b	99	40.647	Petromyzon_marinus
ENSGALG00000002197	-	73	42.105	ENSPFOG00000018357	npm1b	98	43.092	Poecilia_formosa
ENSGALG00000002197	-	73	45.545	ENSPNAG00000005498	npm1b	99	45.545	Pygocentrus_nattereri
ENSGALG00000002197	-	69	43.357	ENSSFOG00015005064	npm1b	97	43.357	Scleropages_formosus
ENSGALG00000002197	-	73	45.098	ENSSMAG00000008088	npm1b	98	44.590	Scophthalmus_maximus
ENSGALG00000002197	-	73	46.405	ENSSDUG00000007726	npm1b	98	45.425	Seriola_dumerili
ENSGALG00000002197	-	73	46.732	ENSSLDG00000021396	npm1b	98	45.752	Seriola_lalandi_dorsalis
ENSGALG00000002197	-	73	45.425	ENSSPAG00000011152	npm1b	98	45.752	Stegastes_partitus
ENSGALG00000002197	-	68	89.493	ENSTGUG00000014970	-	100	88.406	Taeniopygia_guttata
ENSGALG00000002197	-	73	45.485	ENSTRUG00000008105	npm1b	94	45.485	Takifugu_rubripes
ENSGALG00000002197	-	73	41.391	ENSTNIG00000013057	npm1b	99	41.060	Tetraodon_nigroviridis
ENSGALG00000002197	-	73	61.794	ENSXETG00000008403	npm1	99	62.791	Xenopus_tropicalis
ENSGALG00000002197	-	73	43.548	ENSXMAG00000001986	npm1b	98	43.092	Xiphophorus_maculatus