EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000002301 (Gene tree)
Gene ID: 100858397
Gene Symbol: CNOT1
Alias: -
Full Name: Gallus gallus CCR4-NOT transcription complex subunit 1 (CNOT1)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 53324 bases
Position: chr11:1413189-1466512
Accession: NM_001277133
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000003612	Not1	PF04054.15	8.7e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000003619	-	8288	XM_015279106	ENSGALP00000003612	2376 (aa)	XP_015134592	E1C1B8

Gene Model

Click here to download ENSGALG00000002301's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000002301's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000002301	CNOT1	100	97.727	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSGALG00000002301	CNOT1	97	96.914	ENSAPOG00000005042	cnot1	100	96.914	Acanthochromis_polyacanthus
ENSGALG00000002301	CNOT1	100	97.559	ENSAMEG00000017298	CNOT1	100	97.559	Ailuropoda_melanoleuca
ENSGALG00000002301	CNOT1	90	89.422	ENSACIG00000016003	cnot1	100	89.655	Amphilophus_citrinellus
ENSGALG00000002301	CNOT1	100	90.050	ENSAPEG00000022342	cnot1	100	90.008	Amphiprion_percula
ENSGALG00000002301	CNOT1	100	86.997	ENSATEG00000012892	cnot1	100	97.055	Anabas_testudineus
ENSGALG00000002301	CNOT1	100	99.412	ENSAPLG00000007162	CNOT1	100	99.412	Anas_platyrhynchos
ENSGALG00000002301	CNOT1	91	96.985	ENSACAG00000001602	CNOT1	98	96.985	Anolis_carolinensis
ENSGALG00000002301	CNOT1	100	94.847	ENSANAG00000038198	CNOT1	100	94.847	Aotus_nancymaae
ENSGALG00000002301	CNOT1	97	97.055	ENSACLG00000014234	cnot1	100	97.055	Astatotilapia_calliptera
ENSGALG00000002301	CNOT1	100	90.450	ENSAMXG00000013170	cnot1	100	90.959	Astyanax_mexicanus
ENSGALG00000002301	CNOT1	100	97.811	ENSBTAG00000020782	CNOT1	100	98.204	Bos_taurus
ENSGALG00000002301	CNOT1	82	40.080	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSGALG00000002301	CNOT1	100	97.685	ENSCJAG00000011318	CNOT1	100	97.685	Callithrix_jacchus
ENSGALG00000002301	CNOT1	100	97.480	ENSCAFG00000008426	CNOT1	100	97.480	Canis_familiaris
ENSGALG00000002301	CNOT1	100	96.730	ENSCAFG00020010156	CNOT1	100	96.864	Canis_lupus_dingo
ENSGALG00000002301	CNOT1	100	97.811	ENSCHIG00000010452	CNOT1	100	97.811	Capra_hircus
ENSGALG00000002301	CNOT1	100	97.854	ENSTSYG00000006888	CNOT1	100	97.854	Carlito_syrichta
ENSGALG00000002301	CNOT1	100	93.519	ENSCPOG00000013026	CNOT1	100	93.519	Cavia_porcellus
ENSGALG00000002301	CNOT1	100	96.128	ENSCCAG00000026333	CNOT1	100	96.128	Cebus_capucinus
ENSGALG00000002301	CNOT1	100	97.769	ENSCATG00000032625	CNOT1	100	97.769	Cercocebus_atys
ENSGALG00000002301	CNOT1	100	97.769	ENSCLAG00000006289	CNOT1	100	97.769	Chinchilla_lanigera
ENSGALG00000002301	CNOT1	100	97.769	ENSCSAG00000004731	CNOT1	100	97.769	Chlorocebus_sabaeus
ENSGALG00000002301	CNOT1	80	98.940	ENSCHOG00000009712	CNOT1	83	98.940	Choloepus_hoffmanni
ENSGALG00000002301	CNOT1	98	95.995	ENSCPBG00000026222	CNOT1	99	98.472	Chrysemys_picta_bellii
ENSGALG00000002301	CNOT1	100	58.955	ENSCING00000009149	-	100	58.814	Ciona_intestinalis
ENSGALG00000002301	CNOT1	89	63.109	ENSCSAVG00000002414	-	99	63.170	Ciona_savignyi
ENSGALG00000002301	CNOT1	100	95.779	ENSCANG00000040534	CNOT1	100	95.779	Colobus_angolensis_palliatus
ENSGALG00000002301	CNOT1	100	97.433	ENSCGRG00001016365	Cnot1	100	97.433	Cricetulus_griseus_chok1gshd
ENSGALG00000002301	CNOT1	100	97.433	ENSCGRG00000001714	Cnot1	100	97.433	Cricetulus_griseus_crigri
ENSGALG00000002301	CNOT1	100	83.020	ENSCVAG00000018930	cnot1	100	82.852	Cyprinodon_variegatus
ENSGALG00000002301	CNOT1	100	89.690	ENSDARG00000004174	cnot1	100	89.438	Danio_rerio
ENSGALG00000002301	CNOT1	100	95.288	ENSDNOG00000013250	CNOT1	100	95.288	Dasypus_novemcinctus
ENSGALG00000002301	CNOT1	99	45.902	FBgn0085436	Not1	99	47.922	Drosophila_melanogaster
ENSGALG00000002301	CNOT1	84	97.139	ENSETEG00000012806	CNOT1	84	97.139	Echinops_telfairi
ENSGALG00000002301	CNOT1	81	76.831	ENSEBUG00000011534	cnot1	95	76.831	Eptatretus_burgeri
ENSGALG00000002301	CNOT1	100	93.999	ENSEASG00005005819	CNOT1	100	98.204	Equus_asinus_asinus
ENSGALG00000002301	CNOT1	100	97.854	ENSECAG00000009889	CNOT1	100	97.854	Equus_caballus
ENSGALG00000002301	CNOT1	90	97.414	ENSEEUG00000006015	CNOT1	90	97.414	Erinaceus_europaeus
ENSGALG00000002301	CNOT1	100	89.404	ENSELUG00000014085	cnot1	100	89.160	Esox_lucius
ENSGALG00000002301	CNOT1	100	97.566	ENSFCAG00000025155	CNOT1	100	97.566	Felis_catus
ENSGALG00000002301	CNOT1	100	99.369	ENSFALG00000007285	CNOT1	100	99.369	Ficedula_albicollis
ENSGALG00000002301	CNOT1	100	97.685	ENSFDAG00000013399	CNOT1	100	97.685	Fukomys_damarensis
ENSGALG00000002301	CNOT1	100	90.004	ENSFHEG00000020574	cnot1	100	89.962	Fundulus_heteroclitus
ENSGALG00000002301	CNOT1	91	88.894	ENSGMOG00000012864	cnot1	100	89.218	Gadus_morhua
ENSGALG00000002301	CNOT1	100	88.707	ENSGAFG00000015005	cnot1	100	88.707	Gambusia_affinis
ENSGALG00000002301	CNOT1	91	89.732	ENSGACG00000002606	cnot1	100	95.510	Gasterosteus_aculeatus
ENSGALG00000002301	CNOT1	100	98.822	ENSGAGG00000022646	CNOT1	100	99.065	Gopherus_agassizii
ENSGALG00000002301	CNOT1	100	97.685	ENSGGOG00000009547	CNOT1	100	97.685	Gorilla_gorilla
ENSGALG00000002301	CNOT1	97	97.055	ENSHBUG00000001729	cnot1	100	97.055	Haplochromis_burtoni
ENSGALG00000002301	CNOT1	100	97.685	ENSHGLG00000014322	CNOT1	100	97.685	Heterocephalus_glaber_female
ENSGALG00000002301	CNOT1	100	89.089	ENSHCOG00000006501	cnot1	100	89.381	Hippocampus_comes
ENSGALG00000002301	CNOT1	100	88.465	ENSIPUG00000011915	cnot1	100	88.926	Ictalurus_punctatus
ENSGALG00000002301	CNOT1	100	97.769	ENSSTOG00000005490	CNOT1	100	97.769	Ictidomys_tridecemlineatus
ENSGALG00000002301	CNOT1	100	97.138	ENSJJAG00000000633	Cnot1	100	97.138	Jaculus_jaculus
ENSGALG00000002301	CNOT1	100	89.833	ENSKMAG00000006149	cnot1	100	89.916	Kryptolebias_marmoratus
ENSGALG00000002301	CNOT1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSGALG00000002301	CNOT1	100	94.865	ENSLACG00000010869	CNOT1	100	94.865	Latimeria_chalumnae
ENSGALG00000002301	CNOT1	100	92.617	ENSLOCG00000006324	cnot1	100	92.617	Lepisosteus_oculatus
ENSGALG00000002301	CNOT1	100	97.603	ENSLAFG00000000098	CNOT1	100	97.603	Loxodonta_africana
ENSGALG00000002301	CNOT1	100	97.517	ENSMFAG00000035888	CNOT1	100	97.517	Macaca_fascicularis
ENSGALG00000002301	CNOT1	100	97.727	ENSMMUG00000014625	CNOT1	100	97.727	Macaca_mulatta
ENSGALG00000002301	CNOT1	100	94.964	ENSMNEG00000031820	CNOT1	100	97.711	Macaca_nemestrina
ENSGALG00000002301	CNOT1	100	96.338	ENSMLEG00000040933	CNOT1	100	96.338	Mandrillus_leucophaeus
ENSGALG00000002301	CNOT1	100	88.796	ENSMAMG00000016524	cnot1	100	88.875	Mastacembelus_armatus
ENSGALG00000002301	CNOT1	97	97.055	ENSMZEG00005016210	cnot1	100	97.055	Maylandia_zebra
ENSGALG00000002301	CNOT1	100	99.663	ENSMGAG00000001908	CNOT1	100	99.663	Meleagris_gallopavo
ENSGALG00000002301	CNOT1	100	97.643	ENSMICG00000007071	CNOT1	100	97.643	Microcebus_murinus
ENSGALG00000002301	CNOT1	100	97.475	ENSMOCG00000017969	Cnot1	100	97.475	Microtus_ochrogaster
ENSGALG00000002301	CNOT1	97	93.689	ENSMMOG00000019134	cnot1	100	93.689	Mola_mola
ENSGALG00000002301	CNOT1	100	97.560	ENSMODG00000014199	CNOT1	100	97.560	Monodelphis_domestica
ENSGALG00000002301	CNOT1	100	89.920	ENSMALG00000008645	cnot1	100	89.962	Monopterus_albus
ENSGALG00000002301	CNOT1	95	99.048	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	Mus_caroli
ENSGALG00000002301	CNOT1	100	97.517	ENSMUSG00000036550	Cnot1	100	97.517	Mus_musculus
ENSGALG00000002301	CNOT1	100	97.475	MGP_PahariEiJ_G0023028	Cnot1	100	97.475	Mus_pahari
ENSGALG00000002301	CNOT1	100	97.517	MGP_SPRETEiJ_G0032549	Cnot1	100	97.517	Mus_spretus
ENSGALG00000002301	CNOT1	100	97.854	ENSMPUG00000004830	CNOT1	100	97.854	Mustela_putorius_furo
ENSGALG00000002301	CNOT1	100	97.306	ENSMLUG00000003728	CNOT1	100	97.306	Myotis_lucifugus
ENSGALG00000002301	CNOT1	100	97.769	ENSNGAG00000018628	Cnot1	100	97.769	Nannospalax_galili
ENSGALG00000002301	CNOT1	94	97.055	ENSNBRG00000019358	cnot1	100	97.055	Neolamprologus_brichardi
ENSGALG00000002301	CNOT1	100	97.643	ENSNLEG00000003566	CNOT1	100	97.643	Nomascus_leucogenys
ENSGALG00000002301	CNOT1	86	97.092	ENSMEUG00000006145	CNOT1	88	97.092	Notamacropus_eugenii
ENSGALG00000002301	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSGALG00000002301	CNOT1	100	97.643	ENSODEG00000016337	CNOT1	100	97.643	Octodon_degus
ENSGALG00000002301	CNOT1	100	90.201	ENSONIG00000007358	cnot1	100	90.117	Oreochromis_niloticus
ENSGALG00000002301	CNOT1	91	97.675	ENSOANG00000012109	CNOT1	100	98.025	Ornithorhynchus_anatinus
ENSGALG00000002301	CNOT1	100	97.769	ENSOCUG00000006911	CNOT1	100	97.769	Oryctolagus_cuniculus
ENSGALG00000002301	CNOT1	100	89.937	ENSORLG00000013734	cnot1	100	90.021	Oryzias_latipes
ENSGALG00000002301	CNOT1	100	88.408	ENSORLG00020017012	cnot1	100	88.282	Oryzias_latipes_hni
ENSGALG00000002301	CNOT1	100	88.324	ENSORLG00015007091	cnot1	100	88.030	Oryzias_latipes_hsok
ENSGALG00000002301	CNOT1	100	87.327	ENSOMEG00000015124	cnot1	100	87.998	Oryzias_melastigma
ENSGALG00000002301	CNOT1	100	97.685	ENSOGAG00000000543	CNOT1	100	97.685	Otolemur_garnettii
ENSGALG00000002301	CNOT1	100	97.811	ENSOARG00000001567	CNOT1	100	97.811	Ovis_aries
ENSGALG00000002301	CNOT1	100	97.727	ENSPPAG00000022013	CNOT1	100	97.727	Pan_paniscus
ENSGALG00000002301	CNOT1	100	97.854	ENSPPRG00000004867	CNOT1	100	97.854	Panthera_pardus
ENSGALG00000002301	CNOT1	100	97.854	ENSPTIG00000012589	CNOT1	100	97.854	Panthera_tigris_altaica
ENSGALG00000002301	CNOT1	100	97.440	ENSPTRG00000008183	CNOT1	100	97.440	Pan_troglodytes
ENSGALG00000002301	CNOT1	100	94.675	ENSPANG00000020901	CNOT1	100	94.675	Papio_anubis
ENSGALG00000002301	CNOT1	100	91.817	ENSPKIG00000023538	CNOT1	100	91.817	Paramormyrops_kingsleyae
ENSGALG00000002301	CNOT1	97	93.118	ENSPKIG00000002914	CNOT1	99	93.118	Paramormyrops_kingsleyae
ENSGALG00000002301	CNOT1	100	98.611	ENSPSIG00000005499	CNOT1	100	98.611	Pelodiscus_sinensis
ENSGALG00000002301	CNOT1	100	80.872	ENSPMAG00000009381	cnot1	100	80.814	Petromyzon_marinus
ENSGALG00000002301	CNOT1	100	96.496	ENSPCIG00000007343	CNOT1	100	98.611	Phascolarctos_cinereus
ENSGALG00000002301	CNOT1	99	89.302	ENSPFOG00000003497	cnot1	100	89.387	Poecilia_formosa
ENSGALG00000002301	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSGALG00000002301	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSGALG00000002301	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSGALG00000002301	CNOT1	100	97.685	ENSPPYG00000007410	CNOT1	100	97.685	Pongo_abelii
ENSGALG00000002301	CNOT1	90	95.400	ENSPCAG00000003241	CNOT1	90	95.400	Procavia_capensis
ENSGALG00000002301	CNOT1	100	97.398	ENSPCOG00000027139	CNOT1	100	97.398	Propithecus_coquereli
ENSGALG00000002301	CNOT1	100	95.202	ENSPVAG00000004243	CNOT1	100	95.202	Pteropus_vampyrus
ENSGALG00000002301	CNOT1	97	97.055	ENSPNYG00000012919	cnot1	100	97.055	Pundamilia_nyererei
ENSGALG00000002301	CNOT1	100	89.398	ENSPNAG00000000246	cnot1	100	89.819	Pygocentrus_nattereri
ENSGALG00000002301	CNOT1	100	97.433	ENSRNOG00000012271	Cnot1	100	97.433	Rattus_norvegicus
ENSGALG00000002301	CNOT1	100	95.552	ENSRBIG00000044598	CNOT1	100	95.552	Rhinopithecus_bieti
ENSGALG00000002301	CNOT1	100	97.769	ENSRROG00000000906	CNOT1	100	97.769	Rhinopithecus_roxellana
ENSGALG00000002301	CNOT1	56	30.544	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSGALG00000002301	CNOT1	100	93.344	ENSSBOG00000029155	CNOT1	100	93.344	Saimiri_boliviensis_boliviensis
ENSGALG00000002301	CNOT1	100	97.687	ENSSHAG00000012187	CNOT1	100	97.687	Sarcophilus_harrisii
ENSGALG00000002301	CNOT1	100	90.063	ENSSFOG00015017614	cnot1	100	90.063	Scleropages_formosus
ENSGALG00000002301	CNOT1	97	97.055	ENSSMAG00000013844	cnot1	100	97.055	Scophthalmus_maximus
ENSGALG00000002301	CNOT1	97	96.914	ENSSDUG00000021491	cnot1	100	96.914	Seriola_dumerili
ENSGALG00000002301	CNOT1	97	96.914	ENSSLDG00000014816	cnot1	100	96.914	Seriola_lalandi_dorsalis
ENSGALG00000002301	CNOT1	84	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSGALG00000002301	CNOT1	100	90.138	ENSSPAG00000018802	cnot1	100	89.887	Stegastes_partitus
ENSGALG00000002301	CNOT1	100	97.727	ENSSSCG00000002799	CNOT1	100	98.204	Sus_scrofa
ENSGALG00000002301	CNOT1	100	99.117	ENSTGUG00000005919	CNOT1	100	99.117	Taeniopygia_guttata
ENSGALG00000002301	CNOT1	100	88.360	ENSTNIG00000018706	cnot1	100	88.444	Tetraodon_nigroviridis
ENSGALG00000002301	CNOT1	80	97.887	ENSTBEG00000000720	CNOT1	80	97.887	Tupaia_belangeri
ENSGALG00000002301	CNOT1	95	97.552	ENSTTRG00000008460	CNOT1	95	97.552	Tursiops_truncatus
ENSGALG00000002301	CNOT1	100	97.854	ENSUAMG00000009251	CNOT1	100	97.854	Ursus_americanus
ENSGALG00000002301	CNOT1	100	97.854	ENSUMAG00000021291	CNOT1	100	97.854	Ursus_maritimus
ENSGALG00000002301	CNOT1	97	95.228	ENSVPAG00000008846	CNOT1	97	95.228	Vicugna_pacos
ENSGALG00000002301	CNOT1	100	96.730	ENSVVUG00000024037	CNOT1	100	96.864	Vulpes_vulpes
ENSGALG00000002301	CNOT1	100	90.092	ENSXETG00000015900	cnot1	100	89.882	Xenopus_tropicalis
ENSGALG00000002301	CNOT1	100	88.875	ENSXCOG00000013552	cnot1	100	88.875	Xiphophorus_couchianus
ENSGALG00000002301	CNOT1	100	88.917	ENSXMAG00000006031	cnot1	100	88.917	Xiphophorus_maculatus