EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000002430 (Gene tree)
Gene ID: 374025
Gene Symbol: SMN
Alias: -
Full Name: Gallus gallus survival of motor neuron (SMN)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 5509 bases
Position: chrZ:73237469-73242977
Accession: NM_204199
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000043987	SMN	PF06003.12	3.3e-149	1	1
ENSGALP00000003813	SMN	PF06003.12	6.5e-144	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000052078	-	795	-	ENSGALP00000043987	264 (aa)	-	Q98SU9
ENSGALT00000003821	-	1447	XM_015280581	ENSGALP00000003813	246 (aa)	XP_015136067	F6QSX6

Gene Model

Click here to download ENSGALG00000002430's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000002430's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000002430	SMN	95	57.353	ENSG00000172062	SMN1	93	59.245	Homo_sapiens
ENSGALG00000002430	SMN	95	57.353	ENSG00000205571	SMN2	93	59.245	Homo_sapiens
ENSGALG00000002430	SMN	97	47.082	ENSAPOG00000011324	smn1	95	50.000	Acanthochromis_polyacanthus
ENSGALG00000002430	SMN	95	60.370	ENSAMEG00000003316	-	89	61.481	Ailuropoda_melanoleuca
ENSGALG00000002430	SMN	91	50.382	ENSACIG00000019772	-	97	48.496	Amphilophus_citrinellus
ENSGALG00000002430	SMN	97	49.213	ENSAOCG00000024444	smn1	95	51.481	Amphiprion_ocellaris
ENSGALG00000002430	SMN	97	49.606	ENSAPEG00000016504	smn1	95	51.852	Amphiprion_percula
ENSGALG00000002430	SMN	93	54.380	ENSATEG00000002182	smn1	80	56.134	Anabas_testudineus
ENSGALG00000002430	SMN	75	82.412	ENSAPLG00000010912	-	100	82.412	Anas_platyrhynchos
ENSGALG00000002430	SMN	100	67.578	ENSACAG00000010017	-	96	68.519	Anolis_carolinensis
ENSGALG00000002430	SMN	95	57.299	ENSANAG00000032133	-	92	59.124	Aotus_nancymaae
ENSGALG00000002430	SMN	97	50.397	ENSACLG00000007308	smn1	90	50.370	Astatotilapia_calliptera
ENSGALG00000002430	SMN	52	63.768	ENSAMXG00000013884	smn1	96	57.037	Astyanax_mexicanus
ENSGALG00000002430	SMN	95	60.000	ENSBTAG00000005743	SMN2	93	60.370	Bos_taurus
ENSGALG00000002430	SMN	95	56.777	ENSCJAG00000016290	-	92	58.608	Callithrix_jacchus
ENSGALG00000002430	SMN	95	61.481	ENSCAFG00000007812	SMN	93	61.397	Canis_familiaris
ENSGALG00000002430	SMN	95	61.481	ENSCAFG00020019229	-	86	61.397	Canis_lupus_dingo
ENSGALG00000002430	SMN	95	60.294	ENSCHIG00000015559	-	91	60.662	Capra_hircus
ENSGALG00000002430	SMN	95	60.370	ENSTSYG00000012058	-	93	61.111	Carlito_syrichta
ENSGALG00000002430	SMN	76	49.268	ENSCAPG00000011021	-	91	50.990	Cavia_aperea
ENSGALG00000002430	SMN	95	56.089	ENSCPOG00000036973	-	92	58.303	Cavia_porcellus
ENSGALG00000002430	SMN	95	56.159	ENSCPOG00000012328	-	93	58.029	Cavia_porcellus
ENSGALG00000002430	SMN	95	56.827	ENSCCAG00000018127	-	91	58.672	Cebus_capucinus
ENSGALG00000002430	SMN	95	57.353	ENSCATG00000037002	-	93	59.623	Cercocebus_atys
ENSGALG00000002430	SMN	95	57.196	ENSCLAG00000000284	-	92	58.672	Chinchilla_lanigera
ENSGALG00000002430	SMN	95	58.456	ENSCSAG00000015688	-	91	59.926	Chlorocebus_sabaeus
ENSGALG00000002430	SMN	74	80.000	ENSCHOG00000007346	-	100	51.779	Choloepus_hoffmanni
ENSGALG00000002430	SMN	98	75.655	ENSCPBG00000010968	-	99	75.385	Chrysemys_picta_bellii
ENSGALG00000002430	SMN	95	58.519	ENSCANG00000038242	-	93	60.920	Colobus_angolensis_palliatus
ENSGALG00000002430	SMN	92	55.849	ENSCANG00000033324	-	89	56.981	Colobus_angolensis_palliatus
ENSGALG00000002430	SMN	95	57.993	ENSCGRG00001017959	-	93	59.108	Cricetulus_griseus_chok1gshd
ENSGALG00000002430	SMN	95	43.462	ENSCGRG00001016998	-	91	45.946	Cricetulus_griseus_chok1gshd
ENSGALG00000002430	SMN	95	57.993	ENSCGRG00000007698	Smn1	93	59.108	Cricetulus_griseus_crigri
ENSGALG00000002430	SMN	94	46.953	ENSCSEG00000015227	smn1	96	51.971	Cynoglossus_semilaevis
ENSGALG00000002430	SMN	95	48.630	ENSCVAG00000007498	smn1	94	50.896	Cyprinodon_variegatus
ENSGALG00000002430	SMN	100	53.817	ENSDARG00000018494	smn1	98	55.435	Danio_rerio
ENSGALG00000002430	SMN	89	54.237	ENSDNOG00000007283	-	98	56.356	Dasypus_novemcinctus
ENSGALG00000002430	SMN	63	55.689	ENSDNOG00000045949	-	89	52.683	Dasypus_novemcinctus
ENSGALG00000002430	SMN	92	53.101	ENSDORG00000007082	Smn1	90	54.826	Dipodomys_ordii
ENSGALG00000002430	SMN	63	53.448	ENSETEG00000001406	-	90	51.852	Echinops_telfairi
ENSGALG00000002430	SMN	95	41.045	ENSEBUG00000011902	smn1	94	41.971	Eptatretus_burgeri
ENSGALG00000002430	SMN	93	53.386	ENSEASG00005018000	-	93	55.472	Equus_asinus_asinus
ENSGALG00000002430	SMN	96	56.202	ENSECAG00000015215	-	93	59.926	Equus_caballus
ENSGALG00000002430	SMN	93	57.490	ENSEEUG00000015777	-	100	58.333	Erinaceus_europaeus
ENSGALG00000002430	SMN	98	55.474	ENSELUG00000018067	smn1	97	52.669	Esox_lucius
ENSGALG00000002430	SMN	95	59.779	ENSFCAG00000028292	SMN	93	61.255	Felis_catus
ENSGALG00000002430	SMN	100	84.337	ENSFALG00000012320	-	95	85.098	Ficedula_albicollis
ENSGALG00000002430	SMN	95	56.934	ENSFDAG00000017683	-	92	58.759	Fukomys_damarensis
ENSGALG00000002430	SMN	56	63.226	ENSFHEG00000018508	smn1	97	52.878	Fundulus_heteroclitus
ENSGALG00000002430	SMN	97	50.558	ENSGMOG00000017279	smn1	97	49.097	Gadus_morhua
ENSGALG00000002430	SMN	95	55.159	ENSGAFG00000009501	smn1	94	51.880	Gambusia_affinis
ENSGALG00000002430	SMN	97	51.220	ENSGACG00000010584	smn1	92	57.088	Gasterosteus_aculeatus
ENSGALG00000002430	SMN	98	74.400	ENSGAGG00000011374	-	96	75.655	Gopherus_agassizii
ENSGALG00000002430	SMN	50	55.172	ENSGAGG00000013639	-	92	39.394	Gopherus_agassizii
ENSGALG00000002430	SMN	56	64.968	ENSGGOG00000026704	-	86	59.893	Gorilla_gorilla
ENSGALG00000002430	SMN	92	55.378	ENSGGOG00000003872	-	93	55.378	Gorilla_gorilla
ENSGALG00000002430	SMN	97	50.394	ENSHBUG00000013987	smn1	95	51.460	Haplochromis_burtoni
ENSGALG00000002430	SMN	95	55.019	ENSHGLG00000001905	-	94	55.762	Heterocephalus_glaber_female
ENSGALG00000002430	SMN	95	56.985	ENSHGLG00000001018	-	92	58.088	Heterocephalus_glaber_female
ENSGALG00000002430	SMN	93	55.513	ENSHGLG00100018676	-	96	56.274	Heterocephalus_glaber_male
ENSGALG00000002430	SMN	95	56.985	ENSHGLG00100011252	-	92	58.088	Heterocephalus_glaber_male
ENSGALG00000002430	SMN	96	48.746	ENSHCOG00000017136	smn1	91	46.209	Hippocampus_comes
ENSGALG00000002430	SMN	98	52.330	ENSIPUG00000012580	smn1	86	53.237	Ictalurus_punctatus
ENSGALG00000002430	SMN	92	59.459	ENSSTOG00000012288	-	93	57.529	Ictidomys_tridecemlineatus
ENSGALG00000002430	SMN	55	51.389	ENSJJAG00000014853	-	98	50.000	Jaculus_jaculus
ENSGALG00000002430	SMN	97	51.737	ENSKMAG00000007239	smn1	95	51.264	Kryptolebias_marmoratus
ENSGALG00000002430	SMN	97	53.030	ENSLBEG00000022550	smn1	95	50.896	Labrus_bergylta
ENSGALG00000002430	SMN	96	39.080	ENSLACG00000009808	-	90	37.722	Latimeria_chalumnae
ENSGALG00000002430	SMN	96	54.615	ENSLOCG00000011339	smn1	95	57.736	Lepisosteus_oculatus
ENSGALG00000002430	SMN	96	34.496	ENSLOCG00000000801	-	87	31.884	Lepisosteus_oculatus
ENSGALG00000002430	SMN	95	59.341	ENSLAFG00000003425	-	89	61.538	Loxodonta_africana
ENSGALG00000002430	SMN	95	54.412	ENSMFAG00000008812	-	91	56.250	Macaca_fascicularis
ENSGALG00000002430	SMN	95	57.721	ENSMFAG00000031523	SMN1	95	57.736	Macaca_fascicularis
ENSGALG00000002430	SMN	95	53.676	ENSMMUG00000030594	-	91	55.515	Macaca_mulatta
ENSGALG00000002430	SMN	95	57.721	ENSMMUG00000020214	SMN1	93	59.623	Macaca_mulatta
ENSGALG00000002430	SMN	81	44.344	ENSMNEG00000036423	-	86	45.909	Macaca_nemestrina
ENSGALG00000002430	SMN	97	57.246	ENSMNEG00000035094	-	93	59.623	Macaca_nemestrina
ENSGALG00000002430	SMN	95	57.353	ENSMLEG00000041902	-	93	59.623	Mandrillus_leucophaeus
ENSGALG00000002430	SMN	97	51.751	ENSMAMG00000011034	smn1	95	51.613	Mastacembelus_armatus
ENSGALG00000002430	SMN	97	50.794	ENSMZEG00005013634	smn1	95	51.460	Maylandia_zebra
ENSGALG00000002430	SMN	76	92.021	ENSMGAG00000008889	-	100	92.021	Meleagris_gallopavo
ENSGALG00000002430	SMN	57	65.823	ENSMAUG00000010262	Smn1	93	58.364	Mesocricetus_auratus
ENSGALG00000002430	SMN	78	57.895	ENSMICG00000034708	-	87	60.914	Microcebus_murinus
ENSGALG00000002430	SMN	95	58.582	ENSMOCG00000017833	Smn1	93	59.480	Microtus_ochrogaster
ENSGALG00000002430	SMN	95	51.321	ENSMMOG00000005504	smn1	96	51.880	Mola_mola
ENSGALG00000002430	SMN	95	65.556	ENSMODG00000001436	-	92	69.811	Monodelphis_domestica
ENSGALG00000002430	SMN	97	50.388	ENSMALG00000008025	smn1	95	50.896	Monopterus_albus
ENSGALG00000002430	SMN	95	57.407	MGP_CAROLIEiJ_G0018836	Smn1	93	58.889	Mus_caroli
ENSGALG00000002430	SMN	95	57.037	ENSMUSG00000021645	Smn1	93	58.519	Mus_musculus
ENSGALG00000002430	SMN	95	58.582	MGP_PahariEiJ_G0015911	Smn1	93	58.889	Mus_pahari
ENSGALG00000002430	SMN	95	56.667	MGP_SPRETEiJ_G0019718	Smn1	93	58.519	Mus_spretus
ENSGALG00000002430	SMN	93	60.755	ENSMPUG00000014470	-	93	62.264	Mustela_putorius_furo
ENSGALG00000002430	SMN	95	59.353	ENSMLUG00000010603	-	89	58.156	Myotis_lucifugus
ENSGALG00000002430	SMN	95	58.974	ENSNGAG00000019833	Smn1	93	58.759	Nannospalax_galili
ENSGALG00000002430	SMN	97	50.588	ENSNBRG00000023000	smn1	95	51.264	Neolamprologus_brichardi
ENSGALG00000002430	SMN	95	56.985	ENSNLEG00000004454	-	93	59.245	Nomascus_leucogenys
ENSGALG00000002430	SMN	85	62.332	ENSMEUG00000011393	-	100	65.919	Notamacropus_eugenii
ENSGALG00000002430	SMN	93	58.400	ENSOPRG00000002015	-	100	60.784	Ochotona_princeps
ENSGALG00000002430	SMN	92	56.250	ENSODEG00000015976	-	91	59.542	Octodon_degus
ENSGALG00000002430	SMN	97	50.588	ENSONIG00000011799	smn1	95	51.264	Oreochromis_niloticus
ENSGALG00000002430	SMN	96	69.076	ENSOANG00000001626	-	96	69.925	Ornithorhynchus_anatinus
ENSGALG00000002430	SMN	95	60.755	ENSOCUG00000026649	-	92	61.049	Oryctolagus_cuniculus
ENSGALG00000002430	SMN	95	61.450	ENSOCUG00000017097	-	92	61.742	Oryctolagus_cuniculus
ENSGALG00000002430	SMN	95	49.091	ENSOCUG00000025183	-	89	54.321	Oryctolagus_cuniculus
ENSGALG00000002430	SMN	67	54.301	ENSORLG00000010552	smn1	95	55.720	Oryzias_latipes
ENSGALG00000002430	SMN	97	53.226	ENSORLG00020007936	smn1	94	51.321	Oryzias_latipes_hni
ENSGALG00000002430	SMN	56	59.740	ENSORLG00015022425	smn1	95	54.982	Oryzias_latipes_hsok
ENSGALG00000002430	SMN	55	59.732	ENSOMEG00000007824	smn1	95	55.351	Oryzias_melastigma
ENSGALG00000002430	SMN	92	53.558	ENSOGAG00000031414	-	92	54.307	Otolemur_garnettii
ENSGALG00000002430	SMN	96	58.984	ENSOARG00000005425	-	98	58.889	Ovis_aries
ENSGALG00000002430	SMN	95	57.353	ENSPPAG00000036640	-	93	59.245	Pan_paniscus
ENSGALG00000002430	SMN	95	59.779	ENSPPRG00000005575	-	93	61.255	Panthera_pardus
ENSGALG00000002430	SMN	95	59.191	ENSPTIG00000007745	-	93	61.029	Panthera_tigris_altaica
ENSGALG00000002430	SMN	95	56.727	ENSPTRG00000016955	-	93	58.582	Pan_troglodytes
ENSGALG00000002430	SMN	97	54.874	ENSPANG00000000253	-	93	56.679	Papio_anubis
ENSGALG00000002430	SMN	95	57.353	ENSPANG00000013601	-	91	59.191	Papio_anubis
ENSGALG00000002430	SMN	96	51.383	ENSPKIG00000011096	smn1	95	50.936	Paramormyrops_kingsleyae
ENSGALG00000002430	SMN	98	73.307	ENSPSIG00000014787	-	90	70.545	Pelodiscus_sinensis
ENSGALG00000002430	SMN	97	49.035	ENSPMGG00000012285	smn1	95	50.370	Periophthalmus_magnuspinnatus
ENSGALG00000002430	SMN	98	42.264	ENSPMAG00000005004	smn1	94	44.203	Petromyzon_marinus
ENSGALG00000002430	SMN	95	65.926	ENSPCIG00000025764	-	93	69.811	Phascolarctos_cinereus
ENSGALG00000002430	SMN	95	52.963	ENSPFOG00000007786	smn1	94	51.439	Poecilia_formosa
ENSGALG00000002430	SMN	95	56.202	ENSPLAG00000012071	smn1	94	51.880	Poecilia_latipinna
ENSGALG00000002430	SMN	95	55.814	ENSPMEG00000017085	smn1	94	51.504	Poecilia_mexicana
ENSGALG00000002430	SMN	95	56.589	ENSPREG00000005824	smn1	94	52.632	Poecilia_reticulata
ENSGALG00000002430	SMN	96	55.426	ENSPPYG00000015533	-	95	57.358	Pongo_abelii
ENSGALG00000002430	SMN	92	44.681	ENSPPYG00000019189	-	99	42.917	Pongo_abelii
ENSGALG00000002430	SMN	96	57.915	ENSPCAG00000004187	-	98	59.848	Procavia_capensis
ENSGALG00000002430	SMN	74	56.436	ENSPCOG00000022307	-	91	56.796	Propithecus_coquereli
ENSGALG00000002430	SMN	95	60.741	ENSPVAG00000005977	-	92	62.222	Pteropus_vampyrus
ENSGALG00000002430	SMN	97	50.588	ENSPNYG00000014148	smn1	95	51.264	Pundamilia_nyererei
ENSGALG00000002430	SMN	97	54.212	ENSPNAG00000014007	smn1	84	55.515	Pygocentrus_nattereri
ENSGALG00000002430	SMN	95	58.364	ENSRNOG00000018067	Smn1	92	59.480	Rattus_norvegicus
ENSGALG00000002430	SMN	92	51.145	ENSRBIG00000036775	-	88	52.273	Rhinopithecus_bieti
ENSGALG00000002430	SMN	95	58.088	ENSRBIG00000037052	-	91	59.559	Rhinopithecus_bieti
ENSGALG00000002430	SMN	95	58.088	ENSRROG00000039399	-	93	60.000	Rhinopithecus_roxellana
ENSGALG00000002430	SMN	95	53.571	ENSRROG00000031088	-	91	53.175	Rhinopithecus_roxellana
ENSGALG00000002430	SMN	95	57.621	ENSSBOG00000011665	-	91	59.480	Saimiri_boliviensis_boliviensis
ENSGALG00000002430	SMN	89	50.202	ENSSBOG00000020112	-	87	53.360	Saimiri_boliviensis_boliviensis
ENSGALG00000002430	SMN	95	66.667	ENSSHAG00000001499	-	98	67.547	Sarcophilus_harrisii
ENSGALG00000002430	SMN	99	55.755	ENSSFOG00015015507	smn1	97	58.456	Scleropages_formosus
ENSGALG00000002430	SMN	97	47.059	ENSSMAG00000007922	smn1	95	51.079	Scophthalmus_maximus
ENSGALG00000002430	SMN	96	50.549	ENSSDUG00000018533	smn1	95	51.613	Seriola_dumerili
ENSGALG00000002430	SMN	96	50.916	ENSSLDG00000021135	smn1	95	51.971	Seriola_lalandi_dorsalis
ENSGALG00000002430	SMN	100	73.725	ENSSPUG00000000373	-	96	74.627	Sphenodon_punctatus
ENSGALG00000002430	SMN	97	51.029	ENSSPAG00000004345	smn1	94	51.136	Stegastes_partitus
ENSGALG00000002430	SMN	95	59.630	ENSSSCG00000016970	-	92	61.993	Sus_scrofa
ENSGALG00000002430	SMN	95	45.385	ENSSSCG00000029127	-	91	48.235	Sus_scrofa
ENSGALG00000002430	SMN	93	72.593	ENSTGUG00000001548	-	96	72.015	Taeniopygia_guttata
ENSGALG00000002430	SMN	57	61.039	ENSTRUG00000000736	smn	95	54.074	Takifugu_rubripes
ENSGALG00000002430	SMN	97	47.710	ENSTNIG00000009892	smn1	95	52.878	Tetraodon_nigroviridis
ENSGALG00000002430	SMN	63	64.205	ENSTBEG00000002399	-	90	62.963	Tupaia_belangeri
ENSGALG00000002430	SMN	63	63.068	ENSTTRG00000005080	-	91	62.782	Tursiops_truncatus
ENSGALG00000002430	SMN	63	64.205	ENSUAMG00000024947	-	68	62.963	Ursus_americanus
ENSGALG00000002430	SMN	95	61.111	ENSUMAG00000007842	-	69	62.222	Ursus_maritimus
ENSGALG00000002430	SMN	92	56.538	ENSVPAG00000009887	-	93	55.185	Vicugna_pacos
ENSGALG00000002430	SMN	95	61.481	ENSVVUG00000006934	-	93	61.397	Vulpes_vulpes
ENSGALG00000002430	SMN	92	36.434	ENSXETG00000004912	-	77	61.017	Xenopus_tropicalis
ENSGALG00000002430	SMN	99	60.215	ENSXETG00000018189	smn2	95	61.290	Xenopus_tropicalis
ENSGALG00000002430	SMN	95	55.556	ENSXMAG00000001521	smn1	94	56.667	Xiphophorus_maculatus