EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000002531 (Gene tree)
Gene ID: 415680
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 27487 bases
Position: chr11:1722517-1750003
Accession: 415680
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000003978	CPSF_A	PF03178.15	2.6e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000003987	SF3B3-201	4488	XM_001232347	ENSGALP00000003978	1217 (aa)	XP_001232348	A0A1D6UPS9

Gene Model

Click here to download ENSGALG00000002531's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000002531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000002531	SF3B3	100	99.178	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSGALG00000002531	SF3B3	96	93.339	ENSAPOG00000006172	sf3b3	98	93.339	Acanthochromis_polyacanthus
ENSGALG00000002531	SF3B3	100	98.852	ENSAMEG00000002187	SF3B3	100	98.852	Ailuropoda_melanoleuca
ENSGALG00000002531	SF3B3	92	90.625	ENSACIG00000016487	sf3b3	100	90.625	Amphilophus_citrinellus
ENSGALG00000002531	SF3B3	100	93.344	ENSAOCG00000007158	sf3b3	100	93.344	Amphiprion_ocellaris
ENSGALG00000002531	SF3B3	100	93.344	ENSAPEG00000022786	sf3b3	100	93.344	Amphiprion_percula
ENSGALG00000002531	SF3B3	100	93.509	ENSATEG00000013708	sf3b3	100	93.509	Anabas_testudineus
ENSGALG00000002531	SF3B3	81	98.480	ENSAPLG00000004996	SF3B3	100	98.480	Anas_platyrhynchos
ENSGALG00000002531	SF3B3	100	98.850	ENSACAG00000001817	SF3B3	100	98.850	Anolis_carolinensis
ENSGALG00000002531	SF3B3	100	99.178	ENSANAG00000028001	SF3B3	100	99.178	Aotus_nancymaae
ENSGALG00000002531	SF3B3	96	93.083	ENSACLG00000022555	sf3b3	98	93.083	Astatotilapia_calliptera
ENSGALG00000002531	SF3B3	100	93.180	ENSAMXG00000003410	sf3b3	100	93.180	Astyanax_mexicanus
ENSGALG00000002531	SF3B3	100	99.178	ENSBTAG00000010627	SF3B3	100	99.178	Bos_taurus
ENSGALG00000002531	SF3B3	100	60.537	WBGene00019323	teg-4	100	60.537	Caenorhabditis_elegans
ENSGALG00000002531	SF3B3	100	99.178	ENSCJAG00000014773	SF3B3	99	99.178	Callithrix_jacchus
ENSGALG00000002531	SF3B3	100	99.096	ENSCAFG00000020151	SF3B3	100	99.096	Canis_familiaris
ENSGALG00000002531	SF3B3	100	99.096	ENSCAFG00020020912	SF3B3	100	99.096	Canis_lupus_dingo
ENSGALG00000002531	SF3B3	100	99.096	ENSCHIG00000019822	SF3B3	100	99.096	Capra_hircus
ENSGALG00000002531	SF3B3	100	99.178	ENSTSYG00000007910	SF3B3	100	99.178	Carlito_syrichta
ENSGALG00000002531	SF3B3	84	88.330	ENSCAPG00000001484	SF3B3	92	88.330	Cavia_aperea
ENSGALG00000002531	SF3B3	100	97.864	ENSCPOG00000000586	SF3B3	100	97.864	Cavia_porcellus
ENSGALG00000002531	SF3B3	100	99.178	ENSCCAG00000017736	SF3B3	100	99.178	Cebus_capucinus
ENSGALG00000002531	SF3B3	100	99.178	ENSCATG00000036562	SF3B3	100	99.178	Cercocebus_atys
ENSGALG00000002531	SF3B3	100	99.178	ENSCLAG00000003921	SF3B3	100	99.178	Chinchilla_lanigera
ENSGALG00000002531	SF3B3	100	99.178	ENSCSAG00000004371	SF3B3	100	99.178	Chlorocebus_sabaeus
ENSGALG00000002531	SF3B3	90	92.523	ENSCHOG00000001878	SF3B3	90	92.523	Choloepus_hoffmanni
ENSGALG00000002531	SF3B3	100	98.357	ENSCPBG00000015853	SF3B3	100	98.357	Chrysemys_picta_bellii
ENSGALG00000002531	SF3B3	100	80.952	ENSCING00000001342	-	100	80.952	Ciona_intestinalis
ENSGALG00000002531	SF3B3	99	79.557	ENSCSAVG00000011454	-	100	79.557	Ciona_savignyi
ENSGALG00000002531	SF3B3	100	95.974	ENSCANG00000042920	SF3B3	100	95.974	Colobus_angolensis_palliatus
ENSGALG00000002531	SF3B3	100	99.096	ENSCGRG00001015908	Sf3b3	100	99.096	Cricetulus_griseus_chok1gshd
ENSGALG00000002531	SF3B3	100	99.096	ENSCGRG00000010180	Sf3b3	100	99.096	Cricetulus_griseus_crigri
ENSGALG00000002531	SF3B3	82	92.415	ENSCSEG00000014192	sf3b3	99	92.415	Cynoglossus_semilaevis
ENSGALG00000002531	SF3B3	100	92.605	ENSCVAG00000010459	sf3b3	100	92.605	Cyprinodon_variegatus
ENSGALG00000002531	SF3B3	100	93.262	ENSDARG00000103553	sf3b3	100	93.262	Danio_rerio
ENSGALG00000002531	SF3B3	85	99.325	ENSDNOG00000043626	SF3B3	100	99.325	Dasypus_novemcinctus
ENSGALG00000002531	SF3B3	100	99.178	ENSDORG00000014176	Sf3b3	100	99.178	Dipodomys_ordii
ENSGALG00000002531	SF3B3	100	75.387	FBgn0035162	Sf3b3	100	75.387	Drosophila_melanogaster
ENSGALG00000002531	SF3B3	84	98.925	ENSETEG00000002729	SF3B3	84	98.925	Echinops_telfairi
ENSGALG00000002531	SF3B3	100	87.839	ENSEBUG00000006117	sf3b3	100	87.839	Eptatretus_burgeri
ENSGALG00000002531	SF3B3	100	99.096	ENSEASG00005013376	SF3B3	100	99.096	Equus_asinus_asinus
ENSGALG00000002531	SF3B3	100	99.096	ENSECAG00000014053	SF3B3	100	99.096	Equus_caballus
ENSGALG00000002531	SF3B3	93	98.929	ENSEEUG00000015611	SF3B3	93	98.929	Erinaceus_europaeus
ENSGALG00000002531	SF3B3	100	91.230	ENSELUG00000015417	sf3b3	100	91.230	Esox_lucius
ENSGALG00000002531	SF3B3	100	99.096	ENSFCAG00000009487	SF3B3	100	99.096	Felis_catus
ENSGALG00000002531	SF3B3	100	99.507	ENSFALG00000007372	SF3B3	100	99.507	Ficedula_albicollis
ENSGALG00000002531	SF3B3	100	99.178	ENSFDAG00000002608	SF3B3	100	99.178	Fukomys_damarensis
ENSGALG00000002531	SF3B3	100	93.098	ENSFHEG00000017824	sf3b3	100	93.098	Fundulus_heteroclitus
ENSGALG00000002531	SF3B3	100	89.327	ENSGMOG00000008139	sf3b3	100	89.327	Gadus_morhua
ENSGALG00000002531	SF3B3	100	92.687	ENSGAFG00000015206	sf3b3	100	92.687	Gambusia_affinis
ENSGALG00000002531	SF3B3	100	93.021	ENSGACG00000002646	sf3b3	100	93.021	Gasterosteus_aculeatus
ENSGALG00000002531	SF3B3	96	98.463	ENSGAGG00000006746	SF3B3	97	98.463	Gopherus_agassizii
ENSGALG00000002531	SF3B3	100	99.178	ENSGGOG00000003246	SF3B3	100	99.178	Gorilla_gorilla
ENSGALG00000002531	SF3B3	92	85.714	ENSHBUG00000005960	sf3b3	100	86.875	Haplochromis_burtoni
ENSGALG00000002531	SF3B3	100	99.178	ENSHGLG00000010135	SF3B3	100	99.178	Heterocephalus_glaber_female
ENSGALG00000002531	SF3B3	100	96.999	ENSHGLG00100011148	SF3B3	100	96.999	Heterocephalus_glaber_male
ENSGALG00000002531	SF3B3	100	92.523	ENSHCOG00000011981	sf3b3	100	92.523	Hippocampus_comes
ENSGALG00000002531	SF3B3	100	93.098	ENSIPUG00000020435	sf3b3	100	93.098	Ictalurus_punctatus
ENSGALG00000002531	SF3B3	100	99.178	ENSSTOG00000007065	SF3B3	100	99.178	Ictidomys_tridecemlineatus
ENSGALG00000002531	SF3B3	100	99.178	ENSJJAG00000003948	Sf3b3	100	99.178	Jaculus_jaculus
ENSGALG00000002531	SF3B3	100	90.879	ENSKMAG00000004066	sf3b3	99	92.997	Kryptolebias_marmoratus
ENSGALG00000002531	SF3B3	100	92.933	ENSLBEG00000018302	sf3b3	100	92.933	Labrus_bergylta
ENSGALG00000002531	SF3B3	98	92.027	ENSLACG00000012501	SF3B3	99	92.027	Latimeria_chalumnae
ENSGALG00000002531	SF3B3	100	93.760	ENSLOCG00000007566	sf3b3	100	93.760	Lepisosteus_oculatus
ENSGALG00000002531	SF3B3	100	99.096	ENSLAFG00000012219	SF3B3	100	99.096	Loxodonta_africana
ENSGALG00000002531	SF3B3	100	99.178	ENSMFAG00000045487	SF3B3	100	99.178	Macaca_fascicularis
ENSGALG00000002531	SF3B3	100	99.178	ENSMMUG00000017812	SF3B3	100	99.178	Macaca_mulatta
ENSGALG00000002531	SF3B3	100	99.178	ENSMNEG00000033385	SF3B3	100	99.178	Macaca_nemestrina
ENSGALG00000002531	SF3B3	100	95.645	ENSMLEG00000043891	SF3B3	97	98.726	Mandrillus_leucophaeus
ENSGALG00000002531	SF3B3	100	93.509	ENSMAMG00000016837	sf3b3	100	93.509	Mastacembelus_armatus
ENSGALG00000002531	SF3B3	89	90.379	ENSMZEG00005026015	sf3b3	99	90.379	Maylandia_zebra
ENSGALG00000002531	SF3B3	100	93.098	ENSMZEG00005010836	sf3b3	100	93.098	Maylandia_zebra
ENSGALG00000002531	SF3B3	100	100.000	ENSMGAG00000001597	SF3B3	100	100.000	Meleagris_gallopavo
ENSGALG00000002531	SF3B3	81	82.011	ENSMAUG00000013618	Sf3b3	95	82.011	Mesocricetus_auratus
ENSGALG00000002531	SF3B3	100	98.031	ENSMICG00000001363	SF3B3	100	98.031	Microcebus_murinus
ENSGALG00000002531	SF3B3	100	99.096	ENSMOCG00000006108	Sf3b3	100	99.096	Microtus_ochrogaster
ENSGALG00000002531	SF3B3	89	90.657	ENSMMOG00000002598	sf3b3	97	90.657	Mola_mola
ENSGALG00000002531	SF3B3	100	94.581	ENSMODG00000014363	SF3B3	100	94.581	Monodelphis_domestica
ENSGALG00000002531	SF3B3	100	93.180	ENSMALG00000008014	sf3b3	100	93.180	Monopterus_albus
ENSGALG00000002531	SF3B3	100	99.014	MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.014	Mus_caroli
ENSGALG00000002531	SF3B3	100	99.096	ENSMUSG00000033732	Sf3b3	100	99.096	Mus_musculus
ENSGALG00000002531	SF3B3	100	99.014	MGP_SPRETEiJ_G0032681	Sf3b3	100	99.014	Mus_spretus
ENSGALG00000002531	SF3B3	100	99.096	ENSMPUG00000010277	SF3B3	100	99.096	Mustela_putorius_furo
ENSGALG00000002531	SF3B3	100	99.014	ENSMLUG00000014607	SF3B3	100	99.014	Myotis_lucifugus
ENSGALG00000002531	SF3B3	100	99.178	ENSNGAG00000021903	Sf3b3	100	99.178	Nannospalax_galili
ENSGALG00000002531	SF3B3	83	91.667	ENSNBRG00000007197	sf3b3	99	91.667	Neolamprologus_brichardi
ENSGALG00000002531	SF3B3	100	97.701	ENSNLEG00000016127	SF3B3	99	98.726	Nomascus_leucogenys
ENSGALG00000002531	SF3B3	92	97.889	ENSMEUG00000004479	SF3B3	94	97.889	Notamacropus_eugenii
ENSGALG00000002531	SF3B3	98	95.977	ENSOPRG00000009847	SF3B3	100	95.977	Ochotona_princeps
ENSGALG00000002531	SF3B3	100	99.178	ENSODEG00000014154	SF3B3	100	99.178	Octodon_degus
ENSGALG00000002531	SF3B3	100	93.344	ENSONIG00000011198	sf3b3	100	93.344	Oreochromis_niloticus
ENSGALG00000002531	SF3B3	100	98.932	ENSOANG00000001161	-	100	98.932	Ornithorhynchus_anatinus
ENSGALG00000002531	SF3B3	100	96.878	ENSOCUG00000004139	SF3B3	100	96.878	Oryctolagus_cuniculus
ENSGALG00000002531	SF3B3	100	93.344	ENSORLG00000013472	sf3b3	100	93.344	Oryzias_latipes
ENSGALG00000002531	SF3B3	100	93.344	ENSORLG00020017473	sf3b3	100	93.344	Oryzias_latipes_hni
ENSGALG00000002531	SF3B3	100	93.344	ENSORLG00015007710	sf3b3	100	93.344	Oryzias_latipes_hsok
ENSGALG00000002531	SF3B3	100	93.180	ENSOMEG00000014483	sf3b3	100	93.180	Oryzias_melastigma
ENSGALG00000002531	SF3B3	100	98.934	ENSOGAG00000016051	SF3B3	100	98.934	Otolemur_garnettii
ENSGALG00000002531	SF3B3	100	98.852	ENSOARG00000004816	SF3B3	100	98.852	Ovis_aries
ENSGALG00000002531	SF3B3	100	99.178	ENSPPAG00000026807	SF3B3	100	99.178	Pan_paniscus
ENSGALG00000002531	SF3B3	100	99.096	ENSPPRG00000001686	SF3B3	100	99.096	Panthera_pardus
ENSGALG00000002531	SF3B3	89	96.228	ENSPTIG00000020382	SF3B3	100	96.228	Panthera_tigris_altaica
ENSGALG00000002531	SF3B3	100	99.178	ENSPTRG00000008308	SF3B3	100	99.178	Pan_troglodytes
ENSGALG00000002531	SF3B3	100	99.178	ENSPANG00000024075	SF3B3	100	99.178	Papio_anubis
ENSGALG00000002531	SF3B3	100	92.440	ENSPKIG00000002712	sf3b3	100	92.440	Paramormyrops_kingsleyae
ENSGALG00000002531	SF3B3	89	98.620	ENSPSIG00000002232	SF3B3	100	98.620	Pelodiscus_sinensis
ENSGALG00000002531	SF3B3	100	99.096	ENSPEMG00000008603	Sf3b3	100	99.096	Peromyscus_maniculatus_bairdii
ENSGALG00000002531	SF3B3	100	91.701	ENSPMAG00000001793	sf3b3	100	91.701	Petromyzon_marinus
ENSGALG00000002531	SF3B3	100	98.932	ENSPCIG00000014927	SF3B3	100	98.932	Phascolarctos_cinereus
ENSGALG00000002531	SF3B3	100	92.769	ENSPFOG00000015516	sf3b3	100	92.769	Poecilia_formosa
ENSGALG00000002531	SF3B3	100	92.769	ENSPLAG00000014330	sf3b3	100	92.769	Poecilia_latipinna
ENSGALG00000002531	SF3B3	100	92.851	ENSPMEG00000019856	sf3b3	100	92.851	Poecilia_mexicana
ENSGALG00000002531	SF3B3	82	92.850	ENSPREG00000019669	sf3b3	98	92.850	Poecilia_reticulata
ENSGALG00000002531	SF3B3	95	99.221	ENSPPYG00000007539	SF3B3	100	99.221	Pongo_abelii
ENSGALG00000002531	SF3B3	100	77.486	ENSPCAG00000002623	SF3B3	100	77.486	Procavia_capensis
ENSGALG00000002531	SF3B3	84	99.065	ENSPCOG00000026582	SF3B3	100	99.065	Propithecus_coquereli
ENSGALG00000002531	SF3B3	100	99.014	ENSPVAG00000000684	SF3B3	100	99.014	Pteropus_vampyrus
ENSGALG00000002531	SF3B3	100	93.180	ENSPNYG00000003528	sf3b3	100	93.180	Pundamilia_nyererei
ENSGALG00000002531	SF3B3	100	93.344	ENSPNAG00000015419	sf3b3	100	93.344	Pygocentrus_nattereri
ENSGALG00000002531	SF3B3	100	99.096	ENSRNOG00000017724	Sf3b3	100	99.096	Rattus_norvegicus
ENSGALG00000002531	SF3B3	100	99.178	ENSRBIG00000021904	SF3B3	100	99.178	Rhinopithecus_bieti
ENSGALG00000002531	SF3B3	100	99.178	ENSRROG00000045703	SF3B3	100	99.178	Rhinopithecus_roxellana
ENSGALG00000002531	SF3B3	100	99.178	ENSSBOG00000029156	SF3B3	100	99.178	Saimiri_boliviensis_boliviensis
ENSGALG00000002531	SF3B3	100	98.932	ENSSHAG00000000372	SF3B3	100	98.932	Sarcophilus_harrisii
ENSGALG00000002531	SF3B3	100	93.591	ENSSFOG00015012877	sf3b3	100	93.591	Scleropages_formosus
ENSGALG00000002531	SF3B3	100	92.851	ENSSMAG00000014386	sf3b3	100	92.851	Scophthalmus_maximus
ENSGALG00000002531	SF3B3	100	93.591	ENSSDUG00000021201	sf3b3	100	93.591	Seriola_dumerili
ENSGALG00000002531	SF3B3	100	93.509	ENSSLDG00000017532	sf3b3	100	93.509	Seriola_lalandi_dorsalis
ENSGALG00000002531	SF3B3	93	99.081	ENSSARG00000006917	SF3B3	93	99.081	Sorex_araneus
ENSGALG00000002531	SF3B3	100	98.932	ENSSPUG00000006253	SF3B3	100	98.932	Sphenodon_punctatus
ENSGALG00000002531	SF3B3	100	85.703	ENSSPAG00000003125	sf3b3	100	85.703	Stegastes_partitus
ENSGALG00000002531	SF3B3	100	99.096	ENSSSCG00000025323	SF3B3	100	99.096	Sus_scrofa
ENSGALG00000002531	SF3B3	100	99.672	ENSTGUG00000006082	SF3B3	100	99.672	Taeniopygia_guttata
ENSGALG00000002531	SF3B3	89	93.015	ENSTNIG00000004857	sf3b3	100	93.015	Tetraodon_nigroviridis
ENSGALG00000002531	SF3B3	93	84.155	ENSTBEG00000002946	SF3B3	100	84.155	Tupaia_belangeri
ENSGALG00000002531	SF3B3	100	98.274	ENSTTRG00000005855	SF3B3	100	98.274	Tursiops_truncatus
ENSGALG00000002531	SF3B3	100	99.096	ENSUAMG00000006780	SF3B3	100	99.096	Ursus_americanus
ENSGALG00000002531	SF3B3	100	99.096	ENSUMAG00000017757	SF3B3	100	99.096	Ursus_maritimus
ENSGALG00000002531	SF3B3	100	82.991	ENSVPAG00000003202	SF3B3	100	82.991	Vicugna_pacos
ENSGALG00000002531	SF3B3	100	99.014	ENSVVUG00000017922	SF3B3	100	99.014	Vulpes_vulpes
ENSGALG00000002531	SF3B3	100	96.302	ENSXETG00000032869	SF3B3	100	96.302	Xenopus_tropicalis
ENSGALG00000002531	SF3B3	77	94.161	ENSXCOG00000013628	sf3b3	97	94.161	Xiphophorus_couchianus
ENSGALG00000002531	SF3B3	100	92.769	ENSXMAG00000006334	sf3b3	99	93.801	Xiphophorus_maculatus