EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000002943 (Gene tree)
Gene ID: 417559
Gene Symbol: PRPF8
Alias: PRPC8|Prp8|RP13|SNRNP220|hPrp8
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 17838 bases
Position: chr19:5492009-5509846
Accession: 417559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000004641	RRM_4	PF10598.9	3.2e-48	1	1
ENSGALP00000004641	U5_2-snRNA_bdg	PF10597.9	6.3e-74	1	1
ENSGALP00000004641	PRO8NT	PF08082.11	6.2e-87	1	1
ENSGALP00000004641	U6-snRNA_bdg	PF10596.9	1.5e-89	1	1
ENSGALP00000004641	PROCN	PF08083.11	7.9e-237	1	1
ENSGALP00000004641	PRP8_domainIV	PF12134.8	3.6e-130	1	1
ENSGALP00000004641	PROCT	PF08084.11	6.7e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000004650	PRPF8-201	7200	XM_415805	ENSGALP00000004641	2335 (aa)	XP_415805	E1BZT5

Gene Model

Click here to download ENSGALG00000002943's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000002943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000002943	PRPF8	100	99.443	ENSG00000174231	PRPF8	100	99.443	Homo_sapiens
ENSGALG00000002943	PRPF8	100	97.861	ENSAPOG00000010079	prpf8	100	97.861	Acanthochromis_polyacanthus
ENSGALG00000002943	PRPF8	100	99.443	ENSAMEG00000007940	PRPF8	100	99.443	Ailuropoda_melanoleuca
ENSGALG00000002943	PRPF8	100	95.966	ENSACIG00000018280	prpf8	100	95.966	Amphilophus_citrinellus
ENSGALG00000002943	PRPF8	100	97.861	ENSAOCG00000010725	prpf8	100	97.861	Amphiprion_ocellaris
ENSGALG00000002943	PRPF8	100	97.861	ENSAPEG00000014397	prpf8	100	97.861	Amphiprion_percula
ENSGALG00000002943	PRPF8	100	97.263	ENSATEG00000010062	prpf8	100	97.263	Anabas_testudineus
ENSGALG00000002943	PRPF8	96	99.867	ENSAPLG00000010357	PRPF8	100	99.867	Anas_platyrhynchos
ENSGALG00000002943	PRPF8	82	97.677	ENSACAG00000014784	PRPF8	99	97.677	Anolis_carolinensis
ENSGALG00000002943	PRPF8	100	99.443	ENSANAG00000032629	PRPF8	100	99.443	Aotus_nancymaae
ENSGALG00000002943	PRPF8	100	97.489	ENSACLG00000020858	prpf8	100	97.489	Astatotilapia_calliptera
ENSGALG00000002943	PRPF8	100	97.901	ENSAMXG00000020291	prpf8	100	97.901	Astyanax_mexicanus
ENSGALG00000002943	PRPF8	100	99.443	ENSBTAG00000011488	PRPF8	100	99.443	Bos_taurus
ENSGALG00000002943	PRPF8	99	86.535	WBGene00004187	prp-8	99	86.621	Caenorhabditis_elegans
ENSGALG00000002943	PRPF8	100	99.443	ENSCJAG00000001911	PRPF8	100	99.443	Callithrix_jacchus
ENSGALG00000002943	PRPF8	100	99.443	ENSCAFG00000019221	PRPF8	100	99.443	Canis_familiaris
ENSGALG00000002943	PRPF8	96	99.688	ENSCAFG00020009943	PRPF8	100	99.688	Canis_lupus_dingo
ENSGALG00000002943	PRPF8	100	99.443	ENSCHIG00000017499	PRPF8	100	99.443	Capra_hircus
ENSGALG00000002943	PRPF8	100	99.443	ENSTSYG00000014120	PRPF8	100	99.443	Carlito_syrichta
ENSGALG00000002943	PRPF8	96	97.461	ENSCAPG00000009459	PRPF8	99	97.461	Cavia_aperea
ENSGALG00000002943	PRPF8	100	99.443	ENSCPOG00000010379	PRPF8	100	99.443	Cavia_porcellus
ENSGALG00000002943	PRPF8	100	99.443	ENSCCAG00000031983	-	100	99.443	Cebus_capucinus
ENSGALG00000002943	PRPF8	100	99.443	ENSCATG00000038595	PRPF8	100	99.443	Cercocebus_atys
ENSGALG00000002943	PRPF8	100	99.443	ENSCLAG00000004388	PRPF8	100	99.443	Chinchilla_lanigera
ENSGALG00000002943	PRPF8	100	99.443	ENSCSAG00000013929	PRPF8	100	99.443	Chlorocebus_sabaeus
ENSGALG00000002943	PRPF8	81	98.000	ENSCHOG00000008590	PRPF8	88	98.000	Choloepus_hoffmanni
ENSGALG00000002943	PRPF8	100	99.786	ENSCPBG00000020409	PRPF8	100	99.786	Chrysemys_picta_bellii
ENSGALG00000002943	PRPF8	99	92.993	ENSCSAVG00000007825	-	100	91.366	Ciona_savignyi
ENSGALG00000002943	PRPF8	100	99.443	ENSCANG00000043088	PRPF8	100	99.443	Colobus_angolensis_palliatus
ENSGALG00000002943	PRPF8	74	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSGALG00000002943	PRPF8	100	97.777	ENSCSEG00000007905	prpf8	100	97.777	Cynoglossus_semilaevis
ENSGALG00000002943	PRPF8	100	97.652	ENSDARG00000026180	prpf8	100	97.652	Danio_rerio
ENSGALG00000002943	PRPF8	93	99.448	ENSDNOG00000018471	PRPF8	99	99.448	Dasypus_novemcinctus
ENSGALG00000002943	PRPF8	84	98.652	ENSDORG00000006185	Prpf8	96	98.652	Dipodomys_ordii
ENSGALG00000002943	PRPF8	99	91.624	FBgn0033688	Prp8	97	91.624	Drosophila_melanogaster
ENSGALG00000002943	PRPF8	100	94.004	ENSETEG00000017592	PRPF8	100	94.004	Echinops_telfairi
ENSGALG00000002943	PRPF8	99	93.763	ENSEBUG00000006548	prpf8	99	93.763	Eptatretus_burgeri
ENSGALG00000002943	PRPF8	100	99.443	ENSEASG00005009514	PRPF8	100	99.443	Equus_asinus_asinus
ENSGALG00000002943	PRPF8	97	99.692	ENSECAG00000021318	PRPF8	100	99.692	Equus_caballus
ENSGALG00000002943	PRPF8	67	99.259	ENSEEUG00000012120	-	67	99.259	Erinaceus_europaeus
ENSGALG00000002943	PRPF8	98	96.591	ENSELUG00000007120	prpf8	99	96.591	Esox_lucius
ENSGALG00000002943	PRPF8	100	99.443	ENSFCAG00000006297	PRPF8	100	99.443	Felis_catus
ENSGALG00000002943	PRPF8	100	99.914	ENSFALG00000006628	PRPF8	100	99.914	Ficedula_albicollis
ENSGALG00000002943	PRPF8	100	99.443	ENSFDAG00000004711	PRPF8	100	99.443	Fukomys_damarensis
ENSGALG00000002943	PRPF8	100	97.566	ENSFHEG00000021084	prpf8	100	97.566	Fundulus_heteroclitus
ENSGALG00000002943	PRPF8	100	95.516	ENSGMOG00000002028	prpf8	99	95.516	Gadus_morhua
ENSGALG00000002943	PRPF8	99	97.851	ENSGAFG00000010337	prpf8	99	97.851	Gambusia_affinis
ENSGALG00000002943	PRPF8	100	97.730	ENSGACG00000008504	prpf8	100	97.730	Gasterosteus_aculeatus
ENSGALG00000002943	PRPF8	100	99.700	ENSGAGG00000008350	PRPF8	100	99.700	Gopherus_agassizii
ENSGALG00000002943	PRPF8	100	99.443	ENSGGOG00000005516	PRPF8	100	99.443	Gorilla_gorilla
ENSGALG00000002943	PRPF8	100	97.773	ENSHBUG00000016192	prpf8	100	97.773	Haplochromis_burtoni
ENSGALG00000002943	PRPF8	100	99.443	ENSHGLG00000012029	PRPF8	100	99.443	Heterocephalus_glaber_female
ENSGALG00000002943	PRPF8	100	99.443	ENSHGLG00100016494	PRPF8	100	99.443	Heterocephalus_glaber_male
ENSGALG00000002943	PRPF8	100	97.649	ENSHCOG00000016414	prpf8	100	97.649	Hippocampus_comes
ENSGALG00000002943	PRPF8	100	97.733	ENSIPUG00000023230	prpf8	100	97.733	Ictalurus_punctatus
ENSGALG00000002943	PRPF8	100	99.443	ENSSTOG00000005128	PRPF8	100	99.443	Ictidomys_tridecemlineatus
ENSGALG00000002943	PRPF8	100	97.259	ENSJJAG00000021159	Prpf8	100	97.259	Jaculus_jaculus
ENSGALG00000002943	PRPF8	99	97.979	ENSKMAG00000016118	prpf8	99	97.979	Kryptolebias_marmoratus
ENSGALG00000002943	PRPF8	100	97.605	ENSLBEG00000026903	prpf8	100	97.605	Labrus_bergylta
ENSGALG00000002943	PRPF8	95	96.072	ENSLACG00000010479	PRPF8	99	98.599	Latimeria_chalumnae
ENSGALG00000002943	PRPF8	99	98.031	ENSLOCG00000005409	prpf8	99	98.031	Lepisosteus_oculatus
ENSGALG00000002943	PRPF8	100	99.443	ENSLAFG00000015445	PRPF8	100	99.443	Loxodonta_africana
ENSGALG00000002943	PRPF8	100	99.443	ENSMFAG00000039995	PRPF8	100	99.443	Macaca_fascicularis
ENSGALG00000002943	PRPF8	100	99.443	ENSMMUG00000004820	PRPF8	100	99.443	Macaca_mulatta
ENSGALG00000002943	PRPF8	100	99.443	ENSMNEG00000035713	PRPF8	100	99.443	Macaca_nemestrina
ENSGALG00000002943	PRPF8	100	99.443	ENSMLEG00000037937	PRPF8	100	99.443	Mandrillus_leucophaeus
ENSGALG00000002943	PRPF8	100	97.861	ENSMAMG00000008919	prpf8	100	97.861	Mastacembelus_armatus
ENSGALG00000002943	PRPF8	100	97.489	ENSMZEG00005015073	prpf8	100	97.489	Maylandia_zebra
ENSGALG00000002943	PRPF8	100	100.000	ENSMGAG00000004769	PRPF8	100	100.000	Meleagris_gallopavo
ENSGALG00000002943	PRPF8	100	99.400	ENSMICG00000010320	PRPF8	100	99.400	Microcebus_murinus
ENSGALG00000002943	PRPF8	100	99.400	ENSMOCG00000016838	Prpf8	100	99.400	Microtus_ochrogaster
ENSGALG00000002943	PRPF8	100	97.348	ENSMMOG00000011887	prpf8	100	97.348	Mola_mola
ENSGALG00000002943	PRPF8	100	99.443	ENSMODG00000010480	PRPF8	100	99.443	Monodelphis_domestica
ENSGALG00000002943	PRPF8	97	97.621	ENSMALG00000003558	prpf8	100	97.621	Monopterus_albus
ENSGALG00000002943	PRPF8	100	99.358	MGP_CAROLIEiJ_G0016740	Prpf8	100	99.358	Mus_caroli
ENSGALG00000002943	PRPF8	100	99.358	ENSMUSG00000020850	Prpf8	100	99.358	Mus_musculus
ENSGALG00000002943	PRPF8	100	99.315	MGP_PahariEiJ_G0017877	Prpf8	100	99.315	Mus_pahari
ENSGALG00000002943	PRPF8	100	99.358	MGP_SPRETEiJ_G0017583	Prpf8	100	99.358	Mus_spretus
ENSGALG00000002943	PRPF8	100	99.443	ENSMPUG00000013227	PRPF8	100	99.443	Mustela_putorius_furo
ENSGALG00000002943	PRPF8	100	99.230	ENSMLUG00000002666	PRPF8	100	99.230	Myotis_lucifugus
ENSGALG00000002943	PRPF8	100	97.645	ENSNGAG00000005305	Prpf8	100	97.645	Nannospalax_galili
ENSGALG00000002943	PRPF8	100	97.532	ENSNBRG00000013127	prpf8	100	97.532	Neolamprologus_brichardi
ENSGALG00000002943	PRPF8	97	97.508	ENSNLEG00000000897	PRPF8	98	97.508	Nomascus_leucogenys
ENSGALG00000002943	PRPF8	99	97.870	ENSMEUG00000015999	PRPF8	100	97.870	Notamacropus_eugenii
ENSGALG00000002943	PRPF8	100	97.901	ENSOPRG00000003102	PRPF8	100	97.901	Ochotona_princeps
ENSGALG00000002943	PRPF8	100	99.443	ENSODEG00000008468	PRPF8	100	99.443	Octodon_degus
ENSGALG00000002943	PRPF8	100	97.447	ENSONIG00000008153	prpf8	100	97.447	Oreochromis_niloticus
ENSGALG00000002943	PRPF8	82	99.813	ENSOANG00000004250	PRPF8	97	99.813	Ornithorhynchus_anatinus
ENSGALG00000002943	PRPF8	100	99.443	ENSOCUG00000000081	PRPF8	100	99.443	Oryctolagus_cuniculus
ENSGALG00000002943	PRPF8	100	97.026	ENSORLG00000008036	prpf8	100	97.026	Oryzias_latipes
ENSGALG00000002943	PRPF8	100	96.985	ENSORLG00020021070	prpf8	100	96.985	Oryzias_latipes_hni
ENSGALG00000002943	PRPF8	100	97.026	ENSORLG00015002340	prpf8	100	97.026	Oryzias_latipes_hsok
ENSGALG00000002943	PRPF8	100	95.582	ENSOMEG00000016866	prpf8	100	95.582	Oryzias_melastigma
ENSGALG00000002943	PRPF8	100	99.316	ENSOARG00000013312	PRPF8	100	99.316	Ovis_aries
ENSGALG00000002943	PRPF8	100	99.443	ENSPPAG00000042753	PRPF8	100	99.443	Pan_paniscus
ENSGALG00000002943	PRPF8	100	99.443	ENSPPRG00000008746	PRPF8	100	99.443	Panthera_pardus
ENSGALG00000002943	PRPF8	100	99.358	ENSPTIG00000019200	PRPF8	100	99.358	Panthera_tigris_altaica
ENSGALG00000002943	PRPF8	100	99.443	ENSPTRG00000039576	PRPF8	100	99.443	Pan_troglodytes
ENSGALG00000002943	PRPF8	99	99.696	ENSPANG00000024607	PRPF8	98	99.696	Papio_anubis
ENSGALG00000002943	PRPF8	100	97.699	ENSPKIG00000011201	prpf8	100	97.699	Paramormyrops_kingsleyae
ENSGALG00000002943	PRPF8	100	99.743	ENSPSIG00000013393	PRPF8	100	99.743	Pelodiscus_sinensis
ENSGALG00000002943	PRPF8	100	99.400	ENSPEMG00000021699	Prpf8	100	99.400	Peromyscus_maniculatus_bairdii
ENSGALG00000002943	PRPF8	96	93.764	ENSPMAG00000005438	prpf8	100	93.808	Petromyzon_marinus
ENSGALG00000002943	PRPF8	100	99.443	ENSPCIG00000022603	PRPF8	100	99.688	Phascolarctos_cinereus
ENSGALG00000002943	PRPF8	100	97.031	ENSPFOG00000007005	prpf8	100	97.031	Poecilia_formosa
ENSGALG00000002943	PRPF8	100	96.488	ENSPLAG00000020777	prpf8	100	96.488	Poecilia_latipinna
ENSGALG00000002943	PRPF8	100	97.031	ENSPMEG00000004051	prpf8	100	97.031	Poecilia_mexicana
ENSGALG00000002943	PRPF8	100	97.901	ENSPREG00000021902	prpf8	100	97.901	Poecilia_reticulata
ENSGALG00000002943	PRPF8	100	99.443	ENSPPYG00000007777	PRPF8	100	99.443	Pongo_abelii
ENSGALG00000002943	PRPF8	90	99.010	ENSPCAG00000008938	PRPF8	90	99.010	Procavia_capensis
ENSGALG00000002943	PRPF8	100	99.400	ENSPCOG00000015182	PRPF8	100	99.400	Propithecus_coquereli
ENSGALG00000002943	PRPF8	93	99.446	ENSPVAG00000002134	PRPF8	93	99.446	Pteropus_vampyrus
ENSGALG00000002943	PRPF8	100	97.773	ENSPNYG00000016356	prpf8	100	97.773	Pundamilia_nyererei
ENSGALG00000002943	PRPF8	100	97.819	ENSPNAG00000009247	prpf8	100	97.819	Pygocentrus_nattereri
ENSGALG00000002943	PRPF8	100	99.358	ENSRNOG00000003495	Prpf8	100	99.358	Rattus_norvegicus
ENSGALG00000002943	PRPF8	100	99.443	ENSRBIG00000031219	PRPF8	100	99.443	Rhinopithecus_bieti
ENSGALG00000002943	PRPF8	100	99.443	ENSRROG00000038014	PRPF8	100	99.443	Rhinopithecus_roxellana
ENSGALG00000002943	PRPF8	99	62.559	YHR165C	PRP8	95	62.602	Saccharomyces_cerevisiae
ENSGALG00000002943	PRPF8	100	99.443	ENSSBOG00000029717	PRPF8	100	99.443	Saimiri_boliviensis_boliviensis
ENSGALG00000002943	PRPF8	100	99.400	ENSSHAG00000006167	PRPF8	100	99.400	Sarcophilus_harrisii
ENSGALG00000002943	PRPF8	100	97.694	ENSSFOG00015013905	prpf8	100	97.694	Scleropages_formosus
ENSGALG00000002943	PRPF8	100	97.648	ENSSMAG00000017736	prpf8	100	97.648	Scophthalmus_maximus
ENSGALG00000002943	PRPF8	100	97.861	ENSSDUG00000003029	prpf8	100	97.861	Seriola_dumerili
ENSGALG00000002943	PRPF8	68	98.874	ENSSLDG00000017096	prpf8	100	98.874	Seriola_lalandi_dorsalis
ENSGALG00000002943	PRPF8	87	97.882	ENSSARG00000002892	PRPF8	87	97.882	Sorex_araneus
ENSGALG00000002943	PRPF8	100	99.486	ENSSPUG00000007463	PRPF8	100	99.486	Sphenodon_punctatus
ENSGALG00000002943	PRPF8	100	97.263	ENSSPAG00000015639	prpf8	100	97.263	Stegastes_partitus
ENSGALG00000002943	PRPF8	100	99.443	ENSSSCG00000017817	PRPF8	100	99.443	Sus_scrofa
ENSGALG00000002943	PRPF8	52	99.825	ENSTGUG00000015597	-	95	99.825	Taeniopygia_guttata
ENSGALG00000002943	PRPF8	100	99.914	ENSTGUG00000005648	-	100	99.914	Taeniopygia_guttata
ENSGALG00000002943	PRPF8	100	97.648	ENSTRUG00000015906	prpf8	100	97.648	Takifugu_rubripes
ENSGALG00000002943	PRPF8	95	98.865	ENSTNIG00000003460	prpf8	99	98.865	Tetraodon_nigroviridis
ENSGALG00000002943	PRPF8	93	99.796	ENSTBEG00000006431	PRPF8	93	99.796	Tupaia_belangeri
ENSGALG00000002943	PRPF8	100	98.844	ENSTTRG00000006869	PRPF8	100	98.844	Tursiops_truncatus
ENSGALG00000002943	PRPF8	54	98.500	ENSUAMG00000015644	-	96	98.500	Ursus_americanus
ENSGALG00000002943	PRPF8	100	99.186	ENSUMAG00000009385	PRPF8	100	99.186	Ursus_maritimus
ENSGALG00000002943	PRPF8	71	99.310	ENSVPAG00000006063	-	71	99.310	Vicugna_pacos
ENSGALG00000002943	PRPF8	100	99.443	ENSVVUG00000021695	PRPF8	99	99.443	Vulpes_vulpes
ENSGALG00000002943	PRPF8	100	98.673	ENSXETG00000022259	prpf8	100	98.673	Xenopus_tropicalis
ENSGALG00000002943	PRPF8	100	97.523	ENSXCOG00000012775	prpf8	100	97.523	Xiphophorus_couchianus
ENSGALG00000002943	PRPF8	100	97.566	ENSXMAG00000008505	prpf8	100	97.566	Xiphophorus_maculatus