EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000003091 (Gene tree)
Gene ID: 416423
Gene Symbol: PARN
Alias: -
Full Name: Gallus gallus poly(A)-specific ribonuclease (PARN)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 34633 bases
Position: chr14:1197084-1231716
Accession: NM_001030629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000004877	R3H	PF01424.22	2e-06	1	1
ENSGALP00000004877	RNA_bind	PF08675.11	2.3e-33	1	1
ENSGALP00000004877	CAF1	PF04857.20	4e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000004886	-	2861	XM_025155057	ENSGALP00000004877	635 (aa)	XP_025010825	F1NEI8

Gene Model

Click here to download ENSGALG00000003091's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000003091's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000003091	PARN	100	82.582	ENSG00000140694	PARN	100	91.525	Homo_sapiens
ENSGALG00000003091	PARN	100	80.908	ENSAMEG00000011208	PARN	100	80.908	Ailuropoda_melanoleuca
ENSGALG00000003091	PARN	88	73.310	ENSACIG00000000619	parn	87	72.776	Amphilophus_citrinellus
ENSGALG00000003091	PARN	99	70.000	ENSAOCG00000003465	parn	89	69.683	Amphiprion_ocellaris
ENSGALG00000003091	PARN	76	75.410	ENSAPEG00000010661	parn	93	75.205	Amphiprion_percula
ENSGALG00000003091	PARN	91	74.742	ENSATEG00000004661	parn	83	74.399	Anabas_testudineus
ENSGALG00000003091	PARN	99	93.819	ENSAPLG00000013914	PARN	99	93.819	Anas_platyrhynchos
ENSGALG00000003091	PARN	91	86.897	ENSACAG00000004973	PARN	100	80.799	Anolis_carolinensis
ENSGALG00000003091	PARN	100	82.115	ENSANAG00000031516	PARN	100	91.525	Aotus_nancymaae
ENSGALG00000003091	PARN	92	74.315	ENSACLG00000004742	parn	84	73.973	Astatotilapia_calliptera
ENSGALG00000003091	PARN	98	70.161	ENSAMXG00000012390	parn	97	69.901	Astyanax_mexicanus
ENSGALG00000003091	PARN	100	78.627	ENSBTAG00000018097	PARN	100	80.517	Bos_taurus
ENSGALG00000003091	PARN	100	82.582	ENSCJAG00000015866	PARN	100	91.525	Callithrix_jacchus
ENSGALG00000003091	PARN	100	81.123	ENSCAFG00000018795	PARN	100	81.123	Canis_familiaris
ENSGALG00000003091	PARN	100	81.123	ENSCAFG00020024126	PARN	100	81.123	Canis_lupus_dingo
ENSGALG00000003091	PARN	100	81.191	ENSCHIG00000018143	PARN	100	81.191	Capra_hircus
ENSGALG00000003091	PARN	74	60.455	ENSCAPG00000007984	PARN	78	59.627	Cavia_aperea
ENSGALG00000003091	PARN	100	80.062	ENSCPOG00000002263	PARN	100	80.062	Cavia_porcellus
ENSGALG00000003091	PARN	100	82.271	ENSCCAG00000030367	PARN	100	91.525	Cebus_capucinus
ENSGALG00000003091	PARN	84	90.395	ENSCATG00000041368	PARN	100	94.615	Cercocebus_atys
ENSGALG00000003091	PARN	100	81.377	ENSCLAG00000015406	PARN	99	81.377	Chinchilla_lanigera
ENSGALG00000003091	PARN	100	82.737	ENSCSAG00000008142	PARN	100	82.737	Chlorocebus_sabaeus
ENSGALG00000003091	PARN	99	66.403	ENSCHOG00000007014	PARN	100	66.403	Choloepus_hoffmanni
ENSGALG00000003091	PARN	88	89.127	ENSCPBG00000006609	PARN	97	89.127	Chrysemys_picta_bellii
ENSGALG00000003091	PARN	81	43.233	ENSCING00000010142	-	99	43.233	Ciona_intestinalis
ENSGALG00000003091	PARN	100	71.865	ENSCANG00000028849	-	100	91.525	Colobus_angolensis_palliatus
ENSGALG00000003091	PARN	100	78.091	ENSCGRG00001012096	Parn	100	78.091	Cricetulus_griseus_chok1gshd
ENSGALG00000003091	PARN	100	78.091	ENSCGRG00000004939	Parn	100	78.091	Cricetulus_griseus_crigri
ENSGALG00000003091	PARN	94	70.302	ENSCSEG00000002064	parn	100	62.896	Cynoglossus_semilaevis
ENSGALG00000003091	PARN	94	72.194	ENSCVAG00000014848	parn	100	64.192	Cyprinodon_variegatus
ENSGALG00000003091	PARN	91	69.671	ENSDARG00000102634	parn	100	60.185	Danio_rerio
ENSGALG00000003091	PARN	100	83.072	ENSDNOG00000000833	PARN	98	88.669	Dasypus_novemcinctus
ENSGALG00000003091	PARN	66	84.411	ENSETEG00000014828	-	69	84.411	Echinops_telfairi
ENSGALG00000003091	PARN	55	53.652	ENSEBUG00000007052	PARN	100	53.652	Eptatretus_burgeri
ENSGALG00000003091	PARN	100	81.661	ENSEASG00005011400	PARN	100	81.661	Equus_asinus_asinus
ENSGALG00000003091	PARN	100	81.348	ENSECAG00000017792	PARN	100	81.348	Equus_caballus
ENSGALG00000003091	PARN	77	90.741	ENSEEUG00000010370	PARN	86	74.661	Erinaceus_europaeus
ENSGALG00000003091	PARN	99	69.036	ENSELUG00000013139	parn	81	68.878	Esox_lucius
ENSGALG00000003091	PARN	100	82.288	ENSFCAG00000044961	PARN	100	89.831	Felis_catus
ENSGALG00000003091	PARN	99	92.393	ENSFALG00000003911	PARN	98	92.393	Ficedula_albicollis
ENSGALG00000003091	PARN	100	79.937	ENSFDAG00000009234	PARN	100	79.937	Fukomys_damarensis
ENSGALG00000003091	PARN	94	66.833	ENSFHEG00000013738	parn	92	84.746	Fundulus_heteroclitus
ENSGALG00000003091	PARN	84	76.966	ENSGMOG00000003231	parn	97	76.779	Gadus_morhua
ENSGALG00000003091	PARN	91	73.830	ENSGAFG00000011061	parn	90	69.545	Gambusia_affinis
ENSGALG00000003091	PARN	100	68.075	ENSGACG00000019501	parn	100	68.075	Gasterosteus_aculeatus
ENSGALG00000003091	PARN	51	84.877	ENSGAGG00000023281	PARN	86	83.728	Gopherus_agassizii
ENSGALG00000003091	PARN	94	85.406	ENSGGOG00000025224	PARN	99	91.525	Gorilla_gorilla
ENSGALG00000003091	PARN	100	68.019	ENSHBUG00000017906	parn	100	67.863	Haplochromis_burtoni
ENSGALG00000003091	PARN	100	80.220	ENSHGLG00000010886	PARN	100	80.220	Heterocephalus_glaber_female
ENSGALG00000003091	PARN	100	80.220	ENSHGLG00100014659	PARN	100	80.220	Heterocephalus_glaber_male
ENSGALG00000003091	PARN	87	70.390	ENSHCOG00000008683	parn	97	70.390	Hippocampus_comes
ENSGALG00000003091	PARN	91	62.694	ENSIPUG00000012401	parn	85	62.694	Ictalurus_punctatus
ENSGALG00000003091	PARN	100	81.790	ENSSTOG00000007519	PARN	100	81.790	Ictidomys_tridecemlineatus
ENSGALG00000003091	PARN	100	78.931	ENSJJAG00000023049	Parn	100	78.931	Jaculus_jaculus
ENSGALG00000003091	PARN	99	70.570	ENSKMAG00000009462	parn	89	70.253	Kryptolebias_marmoratus
ENSGALG00000003091	PARN	99	69.146	ENSLBEG00000009167	parn	96	68.829	Labrus_bergylta
ENSGALG00000003091	PARN	79	79.167	ENSLACG00000004207	PARN	100	77.594	Latimeria_chalumnae
ENSGALG00000003091	PARN	93	76.351	ENSLOCG00000000715	parn	99	74.074	Lepisosteus_oculatus
ENSGALG00000003091	PARN	100	81.505	ENSLAFG00000015036	PARN	100	81.505	Loxodonta_africana
ENSGALG00000003091	PARN	100	78.416	ENSMFAG00000044852	PARN	100	91.525	Macaca_fascicularis
ENSGALG00000003091	PARN	100	82.737	ENSMMUG00000018849	PARN	100	91.525	Macaca_mulatta
ENSGALG00000003091	PARN	100	82.737	ENSMNEG00000045108	PARN	100	91.525	Macaca_nemestrina
ENSGALG00000003091	PARN	100	82.582	ENSMLEG00000031743	PARN	100	91.525	Mandrillus_leucophaeus
ENSGALG00000003091	PARN	92	72.297	ENSMAMG00000006939	parn	84	71.959	Mastacembelus_armatus
ENSGALG00000003091	PARN	100	68.281	ENSMZEG00005013590	parn	100	68.281	Maylandia_zebra
ENSGALG00000003091	PARN	96	97.545	ENSMGAG00000001004	PARN	96	97.545	Meleagris_gallopavo
ENSGALG00000003091	PARN	100	72.798	ENSMAUG00000008025	Parn	100	72.798	Mesocricetus_auratus
ENSGALG00000003091	PARN	100	82.602	ENSMICG00000016053	PARN	100	89.831	Microcebus_murinus
ENSGALG00000003091	PARN	78	86.640	ENSMOCG00000022211	Parn	100	86.640	Microtus_ochrogaster
ENSGALG00000003091	PARN	87	72.776	ENSMMOG00000011333	parn	92	72.776	Mola_mola
ENSGALG00000003091	PARN	78	92.137	ENSMODG00000004915	PARN	99	92.137	Monodelphis_domestica
ENSGALG00000003091	PARN	84	77.467	ENSMALG00000019426	parn	91	77.467	Monopterus_albus
ENSGALG00000003091	PARN	100	78.997	MGP_CAROLIEiJ_G0020466	Parn	100	78.997	Mus_caroli
ENSGALG00000003091	PARN	100	78.527	ENSMUSG00000022685	Parn	100	86.585	Mus_musculus
ENSGALG00000003091	PARN	100	78.997	MGP_PahariEiJ_G0016172	Parn	100	78.997	Mus_pahari
ENSGALG00000003091	PARN	100	78.683	MGP_SPRETEiJ_G0021361	Parn	100	78.683	Mus_spretus
ENSGALG00000003091	PARN	100	81.747	ENSMPUG00000014464	PARN	100	81.747	Mustela_putorius_furo
ENSGALG00000003091	PARN	78	88.259	ENSMLUG00000005414	PARN	100	88.259	Myotis_lucifugus
ENSGALG00000003091	PARN	93	71.380	ENSNBRG00000006805	parn	99	71.235	Neolamprologus_brichardi
ENSGALG00000003091	PARN	100	82.582	ENSNLEG00000010241	PARN	100	91.525	Nomascus_leucogenys
ENSGALG00000003091	PARN	99	58.637	ENSMEUG00000008178	-	100	58.637	Notamacropus_eugenii
ENSGALG00000003091	PARN	99	77.021	ENSOPRG00000012187	PARN	100	77.021	Ochotona_princeps
ENSGALG00000003091	PARN	100	73.520	ENSODEG00000001617	PARN	100	73.520	Octodon_degus
ENSGALG00000003091	PARN	100	68.960	ENSONIG00000000151	parn	100	68.741	Oreochromis_niloticus
ENSGALG00000003091	PARN	59	81.915	ENSOANG00000020155	-	97	81.915	Ornithorhynchus_anatinus
ENSGALG00000003091	PARN	99	82.047	ENSOCUG00000000322	PARN	100	82.047	Oryctolagus_cuniculus
ENSGALG00000003091	PARN	91	72.461	ENSORLG00020010313	parn	85	72.461	Oryzias_latipes_hni
ENSGALG00000003091	PARN	91	72.289	ENSORLG00015000300	parn	85	72.289	Oryzias_latipes_hsok
ENSGALG00000003091	PARN	92	73.254	ENSOMEG00000019555	parn	97	67.421	Oryzias_melastigma
ENSGALG00000003091	PARN	78	87.475	ENSOGAG00000014626	PARN	100	87.475	Otolemur_garnettii
ENSGALG00000003091	PARN	78	90.283	ENSOARG00000007574	PARN	100	90.283	Ovis_aries
ENSGALG00000003091	PARN	100	82.582	ENSPPAG00000031438	PARN	100	91.525	Pan_paniscus
ENSGALG00000003091	PARN	100	82.288	ENSPPRG00000018583	PARN	100	89.831	Panthera_pardus
ENSGALG00000003091	PARN	100	82.132	ENSPTIG00000012135	PARN	100	89.831	Panthera_tigris_altaica
ENSGALG00000003091	PARN	100	82.271	ENSPTRG00000007792	PARN	100	91.525	Pan_troglodytes
ENSGALG00000003091	PARN	100	79.627	ENSPANG00000020099	PARN	100	91.525	Papio_anubis
ENSGALG00000003091	PARN	92	74.486	ENSPKIG00000022807	parn	93	68.966	Paramormyrops_kingsleyae
ENSGALG00000003091	PARN	97	87.299	ENSPSIG00000014804	PARN	100	86.135	Pelodiscus_sinensis
ENSGALG00000003091	PARN	81	76.459	ENSPMGG00000014431	parn	79	70.753	Periophthalmus_magnuspinnatus
ENSGALG00000003091	PARN	100	76.332	ENSPEMG00000018439	Parn	100	75.705	Peromyscus_maniculatus_bairdii
ENSGALG00000003091	PARN	82	66.987	ENSPMAG00000003956	parn	99	66.987	Petromyzon_marinus
ENSGALG00000003091	PARN	66	83.924	ENSPCIG00000001259	PARN	91	89.831	Phascolarctos_cinereus
ENSGALG00000003091	PARN	84	76.866	ENSPFOG00000012823	parn	90	68.438	Poecilia_formosa
ENSGALG00000003091	PARN	84	77.052	ENSPLAG00000006395	parn	90	68.594	Poecilia_latipinna
ENSGALG00000003091	PARN	84	77.052	ENSPMEG00000007711	parn	90	68.906	Poecilia_mexicana
ENSGALG00000003091	PARN	84	76.866	ENSPREG00000000147	parn	90	68.594	Poecilia_reticulata
ENSGALG00000003091	PARN	100	82.171	ENSPPYG00000007123	PARN	100	82.171	Pongo_abelii
ENSGALG00000003091	PARN	95	72.231	ENSPCAG00000001741	PARN	100	72.231	Procavia_capensis
ENSGALG00000003091	PARN	100	79.781	ENSPCOG00000019292	PARN	100	89.831	Propithecus_coquereli
ENSGALG00000003091	PARN	99	78.922	ENSPVAG00000002547	PARN	100	78.922	Pteropus_vampyrus
ENSGALG00000003091	PARN	92	74.315	ENSPNYG00000006835	parn	100	65.367	Pundamilia_nyererei
ENSGALG00000003091	PARN	90	68.118	ENSPNAG00000018905	parn	89	67.770	Pygocentrus_nattereri
ENSGALG00000003091	PARN	100	77.439	ENSRNOG00000002912	Parn	98	84.848	Rattus_norvegicus
ENSGALG00000003091	PARN	52	76.558	ENSRBIG00000018726	PARN	100	76.558	Rhinopithecus_bieti
ENSGALG00000003091	PARN	52	76.558	ENSRROG00000011162	-	100	76.558	Rhinopithecus_roxellana
ENSGALG00000003091	PARN	100	80.404	ENSSBOG00000034726	PARN	100	91.525	Saimiri_boliviensis_boliviensis
ENSGALG00000003091	PARN	66	90.431	ENSSHAG00000008493	PARN	94	90.431	Sarcophilus_harrisii
ENSGALG00000003091	PARN	96	74.548	ENSSFOG00015014165	parn	98	72.414	Scleropages_formosus
ENSGALG00000003091	PARN	99	67.834	ENSSMAG00000000685	parn	92	67.888	Scophthalmus_maximus
ENSGALG00000003091	PARN	99	69.401	ENSSDUG00000014555	parn	89	69.085	Seriola_dumerili
ENSGALG00000003091	PARN	91	72.664	ENSSARG00000014339	PARN	100	72.664	Sorex_araneus
ENSGALG00000003091	PARN	100	87.461	ENSSPUG00000007719	PARN	100	87.461	Sphenodon_punctatus
ENSGALG00000003091	PARN	99	70.952	ENSSPAG00000007095	parn	100	65.987	Stegastes_partitus
ENSGALG00000003091	PARN	100	81.279	ENSSSCG00000007878	PARN	89	81.279	Sus_scrofa
ENSGALG00000003091	PARN	99	92.575	ENSTGUG00000004971	PARN	99	92.575	Taeniopygia_guttata
ENSGALG00000003091	PARN	55	30.726	ENSTGUG00000011418	PNLDC1	68	30.726	Taeniopygia_guttata
ENSGALG00000003091	PARN	100	68.062	ENSTNIG00000008252	parn	100	69.051	Tetraodon_nigroviridis
ENSGALG00000003091	PARN	91	68.739	ENSTBEG00000010407	PARN	100	68.739	Tupaia_belangeri
ENSGALG00000003091	PARN	99	77.215	ENSTTRG00000002843	PARN	100	77.215	Tursiops_truncatus
ENSGALG00000003091	PARN	73	75.107	ENSUAMG00000008283	PARN	95	75.107	Ursus_americanus
ENSGALG00000003091	PARN	100	81.591	ENSUMAG00000004527	PARN	100	81.591	Ursus_maritimus
ENSGALG00000003091	PARN	93	82.125	ENSVPAG00000008968	PARN	99	80.656	Vicugna_pacos
ENSGALG00000003091	PARN	100	81.591	ENSVVUG00000019509	PARN	100	81.591	Vulpes_vulpes
ENSGALG00000003091	PARN	100	76.609	ENSXETG00000010994	parn	99	83.810	Xenopus_tropicalis
ENSGALG00000003091	PARN	91	69.844	ENSXCOG00000015990	parn	97	68.342	Xiphophorus_couchianus
ENSGALG00000003091	PARN	100	69.062	ENSXMAG00000014783	parn	90	69.074	Xiphophorus_maculatus