EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000003248 (Gene tree)
Gene ID: 427425
Gene Symbol: SUB1
Alias: -
Full Name: Gallus gallus SUB1 homolog%2C transcriptional regulator (SUB1)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 14994 bases
Position: chrZ:9801245-9816238
Accession: NM_001008479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000005126	PC4	PF02229.16	2.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000005135	-	3689	-	ENSGALP00000005126	126 (aa)	-	Q5ZK63

Gene Model

Click here to download ENSGALG00000003248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000003248's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000003248	SUB1	100	89.764	ENSG00000113387	SUB1	100	89.764	Homo_sapiens
ENSGALG00000003248	SUB1	100	73.016	ENSAPOG00000005917	SUB1	100	72.222	Acanthochromis_polyacanthus
ENSGALG00000003248	SUB1	100	88.976	ENSAMEG00000006238	SUB1	95	88.976	Ailuropoda_melanoleuca
ENSGALG00000003248	SUB1	100	75.397	ENSACIG00000015976	sub1b	100	74.603	Amphilophus_citrinellus
ENSGALG00000003248	SUB1	85	74.766	ENSAOCG00000002323	-	75	80.220	Amphiprion_ocellaris
ENSGALG00000003248	SUB1	91	76.522	ENSAOCG00000007313	-	76	81.915	Amphiprion_ocellaris
ENSGALG00000003248	SUB1	52	73.846	ENSAPEG00000014618	-	62	73.846	Amphiprion_percula
ENSGALG00000003248	SUB1	100	76.190	ENSAPEG00000024347	sub1b	100	75.397	Amphiprion_percula
ENSGALG00000003248	SUB1	87	71.171	ENSAPEG00000017151	-	71	80.220	Amphiprion_percula
ENSGALG00000003248	SUB1	100	73.810	ENSATEG00000010340	sub1b	100	73.016	Anabas_testudineus
ENSGALG00000003248	SUB1	100	84.211	ENSACAG00000007974	SUB1	100	81.203	Anolis_carolinensis
ENSGALG00000003248	SUB1	100	89.764	ENSANAG00000011651	-	100	89.764	Aotus_nancymaae
ENSGALG00000003248	SUB1	100	87.302	ENSANAG00000023392	-	83	87.302	Aotus_nancymaae
ENSGALG00000003248	SUB1	100	75.397	ENSACLG00000016875	sub1b	64	74.603	Astatotilapia_calliptera
ENSGALG00000003248	SUB1	100	74.803	ENSAMXG00000037104	sub1b	100	74.016	Astyanax_mexicanus
ENSGALG00000003248	SUB1	100	89.764	ENSBTAG00000021965	SUB1	100	89.764	Bos_taurus
ENSGALG00000003248	SUB1	80	88.235	ENSCJAG00000018718	SUB1	98	88.235	Callithrix_jacchus
ENSGALG00000003248	SUB1	90	81.579	ENSCAFG00000024488	-	86	85.185	Canis_familiaris
ENSGALG00000003248	SUB1	100	88.976	ENSCAFG00000018879	-	88	88.976	Canis_familiaris
ENSGALG00000003248	SUB1	100	88.976	ENSCAFG00000016713	-	96	88.976	Canis_familiaris
ENSGALG00000003248	SUB1	100	88.976	ENSCAFG00020016840	-	100	88.976	Canis_lupus_dingo
ENSGALG00000003248	SUB1	100	88.281	ENSCAFG00020011479	-	77	88.281	Canis_lupus_dingo
ENSGALG00000003248	SUB1	100	89.764	ENSCHIG00000008460	SUB1	100	89.764	Capra_hircus
ENSGALG00000003248	SUB1	100	82.308	ENSTSYG00000014069	-	93	83.077	Carlito_syrichta
ENSGALG00000003248	SUB1	100	89.764	ENSTSYG00000029948	-	100	89.764	Carlito_syrichta
ENSGALG00000003248	SUB1	100	78.740	ENSTSYG00000035366	-	83	78.740	Carlito_syrichta
ENSGALG00000003248	SUB1	100	89.764	ENSCPOG00000031334	SUB1	100	89.764	Cavia_porcellus
ENSGALG00000003248	SUB1	100	89.764	ENSCCAG00000023605	-	100	89.764	Cebus_capucinus
ENSGALG00000003248	SUB1	100	80.952	ENSCCAG00000017043	-	93	80.952	Cebus_capucinus
ENSGALG00000003248	SUB1	100	85.827	ENSCCAG00000033751	-	95	85.827	Cebus_capucinus
ENSGALG00000003248	SUB1	100	85.827	ENSCCAG00000020604	-	100	85.827	Cebus_capucinus
ENSGALG00000003248	SUB1	100	89.764	ENSCATG00000031199	SUB1	100	89.764	Cercocebus_atys
ENSGALG00000003248	SUB1	100	89.062	ENSCLAG00000007522	SUB1	100	89.062	Chinchilla_lanigera
ENSGALG00000003248	SUB1	100	87.402	ENSCSAG00000019449	-	100	87.402	Chlorocebus_sabaeus
ENSGALG00000003248	SUB1	100	89.764	ENSCSAG00000017172	-	100	89.764	Chlorocebus_sabaeus
ENSGALG00000003248	SUB1	100	99.206	ENSCPBG00000024218	SUB1	79	99.206	Chrysemys_picta_bellii
ENSGALG00000003248	SUB1	100	89.764	ENSCANG00000029372	SUB1	100	89.764	Colobus_angolensis_palliatus
ENSGALG00000003248	SUB1	100	73.810	ENSCANG00000028665	-	90	73.810	Colobus_angolensis_palliatus
ENSGALG00000003248	SUB1	100	70.866	ENSCGRG00001016254	-	100	70.866	Cricetulus_griseus_chok1gshd
ENSGALG00000003248	SUB1	100	75.591	ENSCGRG00001014660	-	100	75.591	Cricetulus_griseus_chok1gshd
ENSGALG00000003248	SUB1	100	86.614	ENSCGRG00001003473	-	100	86.614	Cricetulus_griseus_chok1gshd
ENSGALG00000003248	SUB1	100	75.591	ENSCGRG00000019368	-	100	75.591	Cricetulus_griseus_crigri
ENSGALG00000003248	SUB1	100	86.614	ENSCGRG00000001133	-	100	86.614	Cricetulus_griseus_crigri
ENSGALG00000003248	SUB1	100	73.228	ENSCGRG00000001489	-	100	73.228	Cricetulus_griseus_crigri
ENSGALG00000003248	SUB1	100	71.429	ENSDARG00000007720	sub1b	100	69.048	Danio_rerio
ENSGALG00000003248	SUB1	99	76.800	ENSDARG00000053446	sub1a	100	78.571	Danio_rerio
ENSGALG00000003248	SUB1	100	85.827	ENSDNOG00000032396	-	100	85.827	Dasypus_novemcinctus
ENSGALG00000003248	SUB1	100	87.402	ENSDNOG00000040794	-	100	87.402	Dasypus_novemcinctus
ENSGALG00000003248	SUB1	100	88.189	ENSDORG00000013916	Sub1	100	88.189	Dipodomys_ordii
ENSGALG00000003248	SUB1	100	89.764	ENSEASG00005007099	SUB1	100	89.764	Equus_asinus_asinus
ENSGALG00000003248	SUB1	100	89.764	ENSECAG00000012399	SUB1	100	89.764	Equus_caballus
ENSGALG00000003248	SUB1	79	86.139	ENSEEUG00000000436	SUB1	93	90.526	Erinaceus_europaeus
ENSGALG00000003248	SUB1	100	88.976	ENSFCAG00000037288	SUB1	100	88.976	Felis_catus
ENSGALG00000003248	SUB1	100	97.619	ENSFALG00000002143	SUB1	87	97.619	Ficedula_albicollis
ENSGALG00000003248	SUB1	100	89.764	ENSFDAG00000017179	SUB1	100	89.764	Fukomys_damarensis
ENSGALG00000003248	SUB1	100	52.756	ENSGALG00000027147	-	75	58.947	Gallus_gallus
ENSGALG00000003248	SUB1	100	96.032	ENSGALG00000034905	-	100	96.032	Gallus_gallus
ENSGALG00000003248	SUB1	100	73.016	ENSGACG00000003912	sub1b	100	72.222	Gasterosteus_aculeatus
ENSGALG00000003248	SUB1	100	99.206	ENSGAGG00000013535	SUB1	100	99.206	Gopherus_agassizii
ENSGALG00000003248	SUB1	100	89.764	ENSGGOG00000040900	SUB1	100	89.764	Gorilla_gorilla
ENSGALG00000003248	SUB1	82	80.583	ENSHBUG00000013953	sub1b	70	80.851	Haplochromis_burtoni
ENSGALG00000003248	SUB1	100	89.764	ENSHGLG00000006749	SUB1	100	89.764	Heterocephalus_glaber_female
ENSGALG00000003248	SUB1	100	89.764	ENSHGLG00100014344	SUB1	100	89.764	Heterocephalus_glaber_male
ENSGALG00000003248	SUB1	100	70.635	ENSHCOG00000001809	sub1b	100	69.841	Hippocampus_comes
ENSGALG00000003248	SUB1	100	72.868	ENSIPUG00000024367	SUB1	100	72.093	Ictalurus_punctatus
ENSGALG00000003248	SUB1	100	74.603	ENSIPUG00000008166	sub1	100	72.222	Ictalurus_punctatus
ENSGALG00000003248	SUB1	100	88.976	ENSSTOG00000019364	SUB1	100	88.976	Ictidomys_tridecemlineatus
ENSGALG00000003248	SUB1	100	84.252	ENSJJAG00000018885	Sub1	100	84.252	Jaculus_jaculus
ENSGALG00000003248	SUB1	99	74.400	ENSLBEG00000010728	sub1b	100	73.016	Labrus_bergylta
ENSGALG00000003248	SUB1	52	93.846	ENSLACG00000001068	SUB1	100	93.846	Latimeria_chalumnae
ENSGALG00000003248	SUB1	100	78.571	ENSLOCG00000006692	sub1b	100	77.778	Lepisosteus_oculatus
ENSGALG00000003248	SUB1	100	88.976	ENSLAFG00000011006	-	100	89.764	Loxodonta_africana
ENSGALG00000003248	SUB1	100	88.976	ENSLAFG00000032088	-	100	89.764	Loxodonta_africana
ENSGALG00000003248	SUB1	100	89.764	ENSMFAG00000040728	SUB1	100	89.764	Macaca_fascicularis
ENSGALG00000003248	SUB1	100	78.740	ENSMFAG00000045643	-	61	81.102	Macaca_fascicularis
ENSGALG00000003248	SUB1	100	89.764	ENSMMUG00000046181	SUB1	100	89.764	Macaca_mulatta
ENSGALG00000003248	SUB1	100	89.764	ENSMNEG00000037046	SUB1	100	89.764	Macaca_nemestrina
ENSGALG00000003248	SUB1	100	73.016	ENSMLEG00000043436	-	90	73.016	Mandrillus_leucophaeus
ENSGALG00000003248	SUB1	100	89.764	ENSMLEG00000037017	-	100	89.764	Mandrillus_leucophaeus
ENSGALG00000003248	SUB1	100	87.402	ENSMLEG00000030509	-	94	87.402	Mandrillus_leucophaeus
ENSGALG00000003248	SUB1	100	73.810	ENSMAMG00000018428	sub1b	100	73.016	Mastacembelus_armatus
ENSGALG00000003248	SUB1	100	75.397	ENSMZEG00005021252	sub1b	100	74.603	Maylandia_zebra
ENSGALG00000003248	SUB1	100	51.969	ENSMGAG00000001200	-	95	51.969	Meleagris_gallopavo
ENSGALG00000003248	SUB1	100	100.000	ENSMGAG00000002906	SUB1	100	100.000	Meleagris_gallopavo
ENSGALG00000003248	SUB1	100	86.614	ENSMAUG00000020232	Sub1	100	86.614	Mesocricetus_auratus
ENSGALG00000003248	SUB1	100	89.764	ENSMICG00000014535	SUB1	100	89.764	Microcebus_murinus
ENSGALG00000003248	SUB1	100	85.827	ENSMOCG00000018930	-	100	85.827	Microtus_ochrogaster
ENSGALG00000003248	SUB1	100	77.165	ENSMOCG00000016424	-	100	76.378	Microtus_ochrogaster
ENSGALG00000003248	SUB1	100	83.453	ENSMODG00000020410	SUB1	100	82.734	Monodelphis_domestica
ENSGALG00000003248	SUB1	100	76.984	ENSMALG00000007163	sub1b	81	76.190	Monopterus_albus
ENSGALG00000003248	SUB1	100	86.614	MGP_CAROLIEiJ_G0019676	Sub1	100	86.614	Mus_caroli
ENSGALG00000003248	SUB1	100	87.402	ENSMUSG00000022205	Sub1	100	87.402	Mus_musculus
ENSGALG00000003248	SUB1	100	85.827	MGP_PahariEiJ_G0016056	Sub1	100	85.827	Mus_pahari
ENSGALG00000003248	SUB1	100	87.402	MGP_SPRETEiJ_G0020573	Sub1	100	87.402	Mus_spretus
ENSGALG00000003248	SUB1	100	88.189	ENSMPUG00000018418	-	100	88.189	Mustela_putorius_furo
ENSGALG00000003248	SUB1	100	88.976	ENSMPUG00000015185	-	100	88.976	Mustela_putorius_furo
ENSGALG00000003248	SUB1	100	89.764	ENSMLUG00000013685	-	95	89.764	Myotis_lucifugus
ENSGALG00000003248	SUB1	100	84.252	ENSMLUG00000009236	-	95	84.252	Myotis_lucifugus
ENSGALG00000003248	SUB1	100	76.190	ENSNGAG00000017212	-	100	76.190	Nannospalax_galili
ENSGALG00000003248	SUB1	100	83.333	ENSNGAG00000010782	-	84	83.333	Nannospalax_galili
ENSGALG00000003248	SUB1	100	87.402	ENSNGAG00000014072	-	100	87.402	Nannospalax_galili
ENSGALG00000003248	SUB1	82	79.612	ENSNBRG00000008451	sub1b	76	79.787	Neolamprologus_brichardi
ENSGALG00000003248	SUB1	100	88.976	ENSNLEG00000018383	-	95	89.764	Nomascus_leucogenys
ENSGALG00000003248	SUB1	100	88.976	ENSNLEG00000036068	SUB1	100	88.976	Nomascus_leucogenys
ENSGALG00000003248	SUB1	100	84.921	ENSNLEG00000035968	-	100	84.921	Nomascus_leucogenys
ENSGALG00000003248	SUB1	100	92.063	ENSMEUG00000007770	SUB1	100	92.063	Notamacropus_eugenii
ENSGALG00000003248	SUB1	100	88.189	ENSOPRG00000012887	SUB1	100	88.189	Ochotona_princeps
ENSGALG00000003248	SUB1	100	89.764	ENSODEG00000001937	-	100	89.764	Octodon_degus
ENSGALG00000003248	SUB1	100	83.465	ENSODEG00000014558	-	84	84.252	Octodon_degus
ENSGALG00000003248	SUB1	85	86.111	ENSODEG00000015114	-	98	86.066	Octodon_degus
ENSGALG00000003248	SUB1	100	94.444	ENSOANG00000002328	SUB1	95	94.444	Ornithorhynchus_anatinus
ENSGALG00000003248	SUB1	100	85.039	ENSOCUG00000006262	SUB1	60	87.402	Oryctolagus_cuniculus
ENSGALG00000003248	SUB1	100	89.764	ENSOGAG00000009012	-	100	89.764	Otolemur_garnettii
ENSGALG00000003248	SUB1	98	88.710	ENSOGAG00000000337	-	100	88.710	Otolemur_garnettii
ENSGALG00000003248	SUB1	100	89.764	ENSOARG00000012154	SUB1	100	89.764	Ovis_aries
ENSGALG00000003248	SUB1	100	89.764	ENSPPAG00000011212	SUB1	100	89.764	Pan_paniscus
ENSGALG00000003248	SUB1	100	88.976	ENSPPRG00000008557	SUB1	100	88.976	Panthera_pardus
ENSGALG00000003248	SUB1	100	88.976	ENSPTIG00000009466	SUB1	100	88.976	Panthera_tigris_altaica
ENSGALG00000003248	SUB1	100	83.465	ENSPTRG00000041644	-	100	84.252	Pan_troglodytes
ENSGALG00000003248	SUB1	100	89.764	ENSPTRG00000048895	SUB1	100	89.764	Pan_troglodytes
ENSGALG00000003248	SUB1	100	89.764	ENSPANG00000000339	-	97	89.764	Papio_anubis
ENSGALG00000003248	SUB1	100	89.764	ENSPANG00000002644	-	95	89.764	Papio_anubis
ENSGALG00000003248	SUB1	100	87.402	ENSPANG00000000672	-	91	87.402	Papio_anubis
ENSGALG00000003248	SUB1	100	73.016	ENSPANG00000033272	-	90	73.016	Papio_anubis
ENSGALG00000003248	SUB1	100	85.827	ENSPANG00000035601	-	100	82.677	Papio_anubis
ENSGALG00000003248	SUB1	100	75.397	ENSPKIG00000016923	sub1b	100	74.603	Paramormyrops_kingsleyae
ENSGALG00000003248	SUB1	100	98.413	ENSPSIG00000005731	SUB1	95	98.413	Pelodiscus_sinensis
ENSGALG00000003248	SUB1	100	83.333	ENSPCIG00000020827	-	100	84.127	Phascolarctos_cinereus
ENSGALG00000003248	SUB1	100	92.063	ENSPCIG00000020907	-	100	92.063	Phascolarctos_cinereus
ENSGALG00000003248	SUB1	100	89.764	ENSPPYG00000015379	SUB1	100	89.764	Pongo_abelii
ENSGALG00000003248	SUB1	100	85.827	ENSPPYG00000018347	-	100	86.614	Pongo_abelii
ENSGALG00000003248	SUB1	100	89.764	ENSPCOG00000014391	SUB1	100	89.764	Propithecus_coquereli
ENSGALG00000003248	SUB1	100	88.976	ENSPVAG00000004785	SUB1	100	88.976	Pteropus_vampyrus
ENSGALG00000003248	SUB1	100	75.397	ENSPNYG00000010975	sub1b	100	74.603	Pundamilia_nyererei
ENSGALG00000003248	SUB1	99	75.200	ENSPNAG00000005998	sub1b	99	74.400	Pygocentrus_nattereri
ENSGALG00000003248	SUB1	100	74.016	ENSPNAG00000008693	sub1a	100	75.591	Pygocentrus_nattereri
ENSGALG00000003248	SUB1	100	87.402	ENSRNOG00000050563	Sub1	100	87.402	Rattus_norvegicus
ENSGALG00000003248	SUB1	100	84.252	ENSRBIG00000031233	SUB1	100	83.465	Rhinopithecus_bieti
ENSGALG00000003248	SUB1	100	89.764	ENSRROG00000040438	SUB1	100	89.764	Rhinopithecus_roxellana
ENSGALG00000003248	SUB1	100	79.365	ENSRROG00000042718	-	90	79.365	Rhinopithecus_roxellana
ENSGALG00000003248	SUB1	100	89.764	ENSSBOG00000026994	SUB1	100	89.764	Saimiri_boliviensis_boliviensis
ENSGALG00000003248	SUB1	100	92.063	ENSSHAG00000014986	SUB1	100	92.063	Sarcophilus_harrisii
ENSGALG00000003248	SUB1	100	76.190	ENSSFOG00015017283	sub1b	100	73.810	Scleropages_formosus
ENSGALG00000003248	SUB1	100	78.740	ENSSFOG00015018386	sub1b	100	78.740	Scleropages_formosus
ENSGALG00000003248	SUB1	100	72.222	ENSSMAG00000000313	sub1b	100	71.429	Scophthalmus_maximus
ENSGALG00000003248	SUB1	100	74.603	ENSSDUG00000013854	sub1b	76	78.571	Seriola_dumerili
ENSGALG00000003248	SUB1	100	74.603	ENSSLDG00000000852	sub1b	100	73.810	Seriola_lalandi_dorsalis
ENSGALG00000003248	SUB1	100	98.413	ENSSPUG00000016817	SUB1	100	98.413	Sphenodon_punctatus
ENSGALG00000003248	SUB1	100	74.603	ENSSPAG00000019363	sub1b	100	73.810	Stegastes_partitus
ENSGALG00000003248	SUB1	100	89.764	ENSSSCG00000040294	-	87	89.764	Sus_scrofa
ENSGALG00000003248	SUB1	100	89.764	ENSSSCG00000032650	-	100	89.764	Sus_scrofa
ENSGALG00000003248	SUB1	100	96.032	ENSTGUG00000001918	SUB1	100	96.032	Taeniopygia_guttata
ENSGALG00000003248	SUB1	100	71.429	ENSTRUG00000024420	sub1b	100	73.016	Takifugu_rubripes
ENSGALG00000003248	SUB1	100	72.222	ENSTNIG00000002700	sub1b	100	71.429	Tetraodon_nigroviridis
ENSGALG00000003248	SUB1	100	88.189	ENSTBEG00000006504	-	100	88.189	Tupaia_belangeri
ENSGALG00000003248	SUB1	100	88.189	ENSTBEG00000004053	-	100	88.189	Tupaia_belangeri
ENSGALG00000003248	SUB1	100	84.252	ENSTBEG00000001790	-	100	84.252	Tupaia_belangeri
ENSGALG00000003248	SUB1	100	81.890	ENSTBEG00000012861	-	100	84.252	Tupaia_belangeri
ENSGALG00000003248	SUB1	99	82.540	ENSTBEG00000015821	-	100	82.540	Tupaia_belangeri
ENSGALG00000003248	SUB1	100	83.465	ENSTBEG00000011247	-	99	83.465	Tupaia_belangeri
ENSGALG00000003248	SUB1	80	89.216	ENSTTRG00000017324	SUB1	92	89.474	Tursiops_truncatus
ENSGALG00000003248	SUB1	100	88.976	ENSUAMG00000000182	SUB1	100	88.976	Ursus_americanus
ENSGALG00000003248	SUB1	100	88.976	ENSUMAG00000013792	SUB1	100	88.976	Ursus_maritimus
ENSGALG00000003248	SUB1	100	80.952	ENSVPAG00000011012	SUB1	100	80.952	Vicugna_pacos
ENSGALG00000003248	SUB1	100	88.976	ENSVVUG00000022166	-	100	88.976	Vulpes_vulpes
ENSGALG00000003248	SUB1	87	82.727	ENSVVUG00000025193	-	95	80.531	Vulpes_vulpes
ENSGALG00000003248	SUB1	100	84.375	ENSXETG00000027218	sub1	100	84.375	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003713	transcription coactivator activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005667	transcription factor complex	21873635.	IBA	Component
GO:0060261	positive regulation of transcription initiation from RNA polymerase II promoter	21873635.	IBA	Process