EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000003478 (Gene tree)
Gene ID: 395977
Gene Symbol: GFI1B
Alias: GFI
Full Name: Gallus gallus growth factor independent 1B transcriptional repressor (GFI1B)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 8877 bases
Position: chr17:7053329-7062205
Accession: NM_205091
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000005496	zf-C2H2	PF00096.26	5.4e-29	1	5
ENSGALP00000005496	zf-C2H2	PF00096.26	5.4e-29	2	5
ENSGALP00000005496	zf-C2H2	PF00096.26	5.4e-29	3	5
ENSGALP00000005496	zf-C2H2	PF00096.26	5.4e-29	4	5
ENSGALP00000005496	zf-C2H2	PF00096.26	5.4e-29	5	5
ENSGALP00000005496	zf-met	PF12874.7	2e-08	1	2
ENSGALP00000005496	zf-met	PF12874.7	2e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000005506	-	1387	-	ENSGALP00000005496	337 (aa)	-	O42409

Gene Model

Click here to download ENSGALG00000003478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000003478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000003478	GFI1B	100	59.238	ENSAPOG00000001296	gfi1b	100	59.238	Acanthochromis_polyacanthus
ENSGALG00000003478	GFI1B	66	72.889	ENSACIG00000002190	gfi1b	74	72.889	Amphilophus_citrinellus
ENSGALG00000003478	GFI1B	100	59.184	ENSAOCG00000021187	gfi1b	100	59.184	Amphiprion_ocellaris
ENSGALG00000003478	GFI1B	100	59.475	ENSAPEG00000016196	gfi1b	100	59.475	Amphiprion_percula
ENSGALG00000003478	GFI1B	100	58.908	ENSATEG00000002534	gfi1b	100	58.908	Anabas_testudineus
ENSGALG00000003478	GFI1B	100	91.395	ENSAPLG00000003373	GFI1B	100	91.395	Anas_platyrhynchos
ENSGALG00000003478	GFI1B	100	56.851	ENSACLG00000027053	gfi1b	100	56.851	Astatotilapia_calliptera
ENSGALG00000003478	GFI1B	100	61.808	ENSAMXG00000037544	GFI1B	100	61.808	Astyanax_mexicanus
ENSGALG00000003478	GFI1B	100	67.353	ENSCAPG00000010404	GFI1B	100	67.353	Cavia_aperea
ENSGALG00000003478	GFI1B	100	80.994	ENSCPBG00000021186	GFI1B	100	80.994	Chrysemys_picta_bellii
ENSGALG00000003478	GFI1B	100	58.112	ENSCSEG00000001315	gfi1b	100	58.112	Cynoglossus_semilaevis
ENSGALG00000003478	GFI1B	100	58.358	ENSCVAG00000017168	gfi1b	100	58.358	Cyprinodon_variegatus
ENSGALG00000003478	GFI1B	100	60.983	ENSDARG00000079947	gfi1b	97	78.112	Danio_rerio
ENSGALG00000003478	GFI1B	66	59.193	ENSEEUG00000012609	-	98	59.193	Erinaceus_europaeus
ENSGALG00000003478	GFI1B	100	59.599	ENSELUG00000016933	gfi1b	100	59.599	Esox_lucius
ENSGALG00000003478	GFI1B	100	81.868	ENSFALG00000001479	GFI1B	100	81.868	Ficedula_albicollis
ENSGALG00000003478	GFI1B	100	58.892	ENSFHEG00000015138	gfi1b	100	58.892	Fundulus_heteroclitus
ENSGALG00000003478	GFI1B	68	76.824	ENSGMOG00000019123	gfi1b	87	76.824	Gadus_morhua
ENSGALG00000003478	GFI1B	69	72.961	ENSGAFG00000003059	gfi1b	99	72.961	Gambusia_affinis
ENSGALG00000003478	GFI1B	100	58.120	ENSGACG00000018134	gfi1b	100	58.120	Gasterosteus_aculeatus
ENSGALG00000003478	GFI1B	100	83.086	ENSGAGG00000021327	GFI1B	100	83.086	Gopherus_agassizii
ENSGALG00000003478	GFI1B	100	56.851	ENSHBUG00000005451	gfi1b	100	56.851	Haplochromis_burtoni
ENSGALG00000003478	GFI1B	100	58.065	ENSHCOG00000013713	gfi1b	100	58.065	Hippocampus_comes
ENSGALG00000003478	GFI1B	100	61.988	ENSIPUG00000012769	gfi1b	100	61.988	Ictalurus_punctatus
ENSGALG00000003478	GFI1B	99	63.200	ENSJJAG00000016355	Gfi1b	100	63.200	Jaculus_jaculus
ENSGALG00000003478	GFI1B	100	58.407	ENSKMAG00000016047	gfi1b	100	58.407	Kryptolebias_marmoratus
ENSGALG00000003478	GFI1B	100	58.997	ENSLBEG00000020297	gfi1b	99	58.997	Labrus_bergylta
ENSGALG00000003478	GFI1B	100	65.789	ENSLACG00000012207	GFI1B	100	65.789	Latimeria_chalumnae
ENSGALG00000003478	GFI1B	100	61.337	ENSLOCG00000005750	gfi1b	100	61.337	Lepisosteus_oculatus
ENSGALG00000003478	GFI1B	100	68.497	ENSLAFG00000022367	GFI1B	100	68.497	Loxodonta_africana
ENSGALG00000003478	GFI1B	100	60.117	ENSMAMG00000003040	gfi1b	100	60.117	Mastacembelus_armatus
ENSGALG00000003478	GFI1B	99	57.018	ENSMZEG00005015594	gfi1b	99	57.018	Maylandia_zebra
ENSGALG00000003478	GFI1B	100	97.626	ENSMGAG00000006129	GFI1B	100	97.626	Meleagris_gallopavo
ENSGALG00000003478	GFI1B	100	59.706	ENSMMOG00000011764	gfi1b	100	59.706	Mola_mola
ENSGALG00000003478	GFI1B	100	64.611	ENSMODG00000012600	GFI1B	100	64.611	Monodelphis_domestica
ENSGALG00000003478	GFI1B	100	58.065	ENSMALG00000004034	gfi1b	100	58.065	Monopterus_albus
ENSGALG00000003478	GFI1B	100	68.035	ENSNGAG00000003333	Gfi1b	100	68.915	Nannospalax_galili
ENSGALG00000003478	GFI1B	100	56.695	ENSNBRG00000012391	gfi1b	100	56.695	Neolamprologus_brichardi
ENSGALG00000003478	GFI1B	100	55.556	ENSONIG00000013011	gfi1b	100	83.240	Oreochromis_niloticus
ENSGALG00000003478	GFI1B	100	71.221	ENSOANG00000014723	GFI1B	100	71.221	Ornithorhynchus_anatinus
ENSGALG00000003478	GFI1B	100	45.133	ENSORLG00000014390	GFI1B	96	49.826	Oryzias_latipes
ENSGALG00000003478	GFI1B	100	57.522	ENSORLG00020003719	GFI1B	100	57.522	Oryzias_latipes_hni
ENSGALG00000003478	GFI1B	100	57.522	ENSORLG00015017142	gfi1b	100	57.522	Oryzias_latipes_hsok
ENSGALG00000003478	GFI1B	100	57.522	ENSOMEG00000015149	GFI1B	100	57.817	Oryzias_melastigma
ENSGALG00000003478	GFI1B	100	68.023	ENSOGAG00000008879	GFI1B	100	67.816	Otolemur_garnettii
ENSGALG00000003478	GFI1B	100	60.969	ENSPKIG00000007643	gfi1b	100	60.969	Paramormyrops_kingsleyae
ENSGALG00000003478	GFI1B	100	79.360	ENSPSIG00000012112	GFI1B	100	79.360	Pelodiscus_sinensis
ENSGALG00000003478	GFI1B	99	56.395	ENSPMGG00000006021	gfi1b	99	56.395	Periophthalmus_magnuspinnatus
ENSGALG00000003478	GFI1B	100	64.595	ENSPCIG00000019724	GFI1B	100	64.595	Phascolarctos_cinereus
ENSGALG00000003478	GFI1B	100	57.817	ENSPFOG00000003460	gfi1b	100	57.817	Poecilia_formosa
ENSGALG00000003478	GFI1B	100	58.529	ENSPLAG00000021960	GFI1B	100	58.529	Poecilia_latipinna
ENSGALG00000003478	GFI1B	100	58.430	ENSPLAG00000017181	GFI1B	100	58.430	Poecilia_latipinna
ENSGALG00000003478	GFI1B	100	58.235	ENSPMEG00000019220	gfi1b	100	58.235	Poecilia_mexicana
ENSGALG00000003478	GFI1B	100	58.235	ENSPMEG00000001556	GFI1B	100	58.235	Poecilia_mexicana
ENSGALG00000003478	GFI1B	100	57.353	ENSPREG00000021718	gfi1b	100	57.353	Poecilia_reticulata
ENSGALG00000003478	GFI1B	100	55.394	ENSPNYG00000018422	gfi1b	100	55.394	Pundamilia_nyererei
ENSGALG00000003478	GFI1B	100	60.767	ENSPNAG00000021118	gfi1b	100	60.767	Pygocentrus_nattereri
ENSGALG00000003478	GFI1B	100	59.409	ENSSHAG00000006462	GFI1B	100	59.409	Sarcophilus_harrisii
ENSGALG00000003478	GFI1B	83	54.949	ENSSFOG00015011566	gfi1b	90	54.949	Scleropages_formosus
ENSGALG00000003478	GFI1B	100	58.772	ENSSMAG00000015181	gfi1b	99	58.580	Scophthalmus_maximus
ENSGALG00000003478	GFI1B	100	58.960	ENSSDUG00000011604	gfi1b	100	58.960	Seriola_dumerili
ENSGALG00000003478	GFI1B	100	58.960	ENSSLDG00000013823	gfi1b	100	58.960	Seriola_lalandi_dorsalis
ENSGALG00000003478	GFI1B	100	64.638	ENSSPUG00000016039	GFI1B	100	64.638	Sphenodon_punctatus
ENSGALG00000003478	GFI1B	100	58.702	ENSSPAG00000022914	gfi1b	100	58.702	Stegastes_partitus
ENSGALG00000003478	GFI1B	57	81.675	ENSTGUG00000015953	-	100	81.675	Taeniopygia_guttata
ENSGALG00000003478	GFI1B	100	57.143	ENSTRUG00000004525	gfi1b	100	57.143	Takifugu_rubripes
ENSGALG00000003478	GFI1B	100	58.407	ENSTNIG00000003834	gfi1b	100	58.407	Tetraodon_nigroviridis
ENSGALG00000003478	GFI1B	100	52.450	ENSTBEG00000014459	GFI1B	100	52.450	Tupaia_belangeri
ENSGALG00000003478	GFI1B	100	58.739	ENSXETG00000006263	gfi1b	100	59.026	Xenopus_tropicalis
ENSGALG00000003478	GFI1B	100	58.529	ENSXMAG00000027589	gfi1b	100	58.529	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001085	RNA polymerase II transcription factor binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0005667	transcription factor complex	-	IEA	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0016363	nuclear matrix	-	IEA	Component
GO:0046872	metal ion binding	-	IEA	Function