EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000003563 (Gene tree)
Gene ID: 419666
Gene Symbol: YARS
Alias: -
Full Name: Gallus gallus tyrosyl-tRNA synthetase (YARS)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 4813 bases
Position: chr23:5412996-5417808
Accession: NM_001006314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000005633	tRNA_bind	PF01588.20	6.7e-33	1	1
ENSGALP00000005633	tRNA-synt_1b	PF00579.25	6.1e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000005643	-	2334	XM_025142997	ENSGALP00000005633	536 (aa)	XP_024998765	F1NJU7

Gene Model

Click here to download ENSGALG00000003563's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000003563's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000003563	YARS	98	87.311	ENSG00000134684	YARS	100	87.311	Homo_sapiens
ENSGALG00000003563	YARS	98	77.111	ENSAPOG00000020788	yars	99	78.178	Acanthochromis_polyacanthus
ENSGALG00000003563	YARS	98	87.311	ENSAMEG00000007476	YARS	100	87.311	Ailuropoda_melanoleuca
ENSGALG00000003563	YARS	98	77.609	ENSACIG00000017504	yars	100	77.609	Amphilophus_citrinellus
ENSGALG00000003563	YARS	98	77.341	ENSAOCG00000009987	yars	99	78.409	Amphiprion_ocellaris
ENSGALG00000003563	YARS	98	77.341	ENSAPEG00000001273	yars	99	78.409	Amphiprion_percula
ENSGALG00000003563	YARS	98	77.040	ENSATEG00000005301	yars	100	77.040	Anabas_testudineus
ENSGALG00000003563	YARS	96	88.781	ENSAPLG00000005739	YARS	98	88.781	Anas_platyrhynchos
ENSGALG00000003563	YARS	97	85.769	ENSACAG00000003568	YARS	98	85.769	Anolis_carolinensis
ENSGALG00000003563	YARS	98	88.068	ENSANAG00000034533	YARS	100	88.068	Aotus_nancymaae
ENSGALG00000003563	YARS	98	75.901	ENSACLG00000004618	yars	100	76.091	Astatotilapia_calliptera
ENSGALG00000003563	YARS	97	80.153	ENSAMXG00000010993	yars	99	80.153	Astyanax_mexicanus
ENSGALG00000003563	YARS	98	86.932	ENSBTAG00000018065	YARS	100	86.932	Bos_taurus
ENSGALG00000003563	YARS	98	86.932	ENSCJAG00000001037	YARS	100	86.932	Callithrix_jacchus
ENSGALG00000003563	YARS	99	86.116	ENSCAFG00000010481	YARS	95	86.116	Canis_familiaris
ENSGALG00000003563	YARS	98	86.389	ENSCAFG00020025379	YARS	100	86.389	Canis_lupus_dingo
ENSGALG00000003563	YARS	98	87.311	ENSCHIG00000014340	YARS	100	87.311	Capra_hircus
ENSGALG00000003563	YARS	98	87.689	ENSTSYG00000005019	YARS	100	87.689	Carlito_syrichta
ENSGALG00000003563	YARS	88	61.864	ENSCAPG00000008627	YARS	100	61.864	Cavia_aperea
ENSGALG00000003563	YARS	99	86.415	ENSCPOG00000009614	YARS	94	86.415	Cavia_porcellus
ENSGALG00000003563	YARS	99	87.030	ENSCCAG00000036757	YARS	98	87.030	Cebus_capucinus
ENSGALG00000003563	YARS	99	87.430	ENSCATG00000044394	YARS	100	88.068	Cercocebus_atys
ENSGALG00000003563	YARS	98	87.121	ENSCLAG00000008977	YARS	93	87.121	Chinchilla_lanigera
ENSGALG00000003563	YARS	98	88.068	ENSCSAG00000001062	YARS	100	88.068	Chlorocebus_sabaeus
ENSGALG00000003563	YARS	95	78.193	ENSCHOG00000003939	YARS	100	78.193	Choloepus_hoffmanni
ENSGALG00000003563	YARS	97	88.506	ENSCPBG00000010998	YARS	99	88.506	Chrysemys_picta_bellii
ENSGALG00000003563	YARS	97	69.829	ENSCING00000005113	-	99	70.398	Ciona_intestinalis
ENSGALG00000003563	YARS	97	66.603	ENSCSAVG00000003706	-	99	67.304	Ciona_savignyi
ENSGALG00000003563	YARS	98	87.500	ENSCANG00000038285	YARS	100	87.500	Colobus_angolensis_palliatus
ENSGALG00000003563	YARS	99	87.382	ENSCGRG00001010863	Yars	100	83.333	Cricetulus_griseus_chok1gshd
ENSGALG00000003563	YARS	99	87.382	ENSCGRG00000007526	Yars	94	87.382	Cricetulus_griseus_crigri
ENSGALG00000003563	YARS	97	76.967	ENSCSEG00000009643	yars	98	77.351	Cynoglossus_semilaevis
ENSGALG00000003563	YARS	98	79.434	ENSCVAG00000016583	yars	100	79.434	Cyprinodon_variegatus
ENSGALG00000003563	YARS	97	81.071	ENSDARG00000035913	yars	98	90.204	Danio_rerio
ENSGALG00000003563	YARS	98	87.311	ENSDNOG00000000536	YARS	100	87.311	Dasypus_novemcinctus
ENSGALG00000003563	YARS	98	85.985	ENSDORG00000011871	Yars	100	85.985	Dipodomys_ordii
ENSGALG00000003563	YARS	97	69.407	FBgn0027080	TyrRS	99	69.407	Drosophila_melanogaster
ENSGALG00000003563	YARS	85	88.095	ENSETEG00000000215	YARS	87	88.095	Echinops_telfairi
ENSGALG00000003563	YARS	97	65.399	ENSEBUG00000004750	yars	99	65.399	Eptatretus_burgeri
ENSGALG00000003563	YARS	97	86.590	ENSEASG00005011762	YARS	94	85.660	Equus_asinus_asinus
ENSGALG00000003563	YARS	97	86.782	ENSECAG00000010015	YARS	68	85.849	Equus_caballus
ENSGALG00000003563	YARS	85	67.105	ENSEEUG00000005992	-	87	67.105	Erinaceus_europaeus
ENSGALG00000003563	YARS	97	79.693	ENSELUG00000017171	yars	99	79.693	Esox_lucius
ENSGALG00000003563	YARS	85	91.667	ENSFCAG00000000704	YARS	100	91.667	Felis_catus
ENSGALG00000003563	YARS	97	94.808	ENSFALG00000000592	YARS	94	94.539	Ficedula_albicollis
ENSGALG00000003563	YARS	99	86.038	ENSFDAG00000006620	YARS	94	86.038	Fukomys_damarensis
ENSGALG00000003563	YARS	98	78.383	ENSFHEG00000022444	yars	99	79.696	Fundulus_heteroclitus
ENSGALG00000003563	YARS	95	75.591	ENSGMOG00000006555	yars	100	75.591	Gadus_morhua
ENSGALG00000003563	YARS	98	76.648	ENSGACG00000008516	yars	99	77.714	Gasterosteus_aculeatus
ENSGALG00000003563	YARS	97	88.506	ENSGAGG00000024290	YARS	99	88.506	Gopherus_agassizii
ENSGALG00000003563	YARS	99	86.654	ENSGGOG00000014013	YARS	100	87.121	Gorilla_gorilla
ENSGALG00000003563	YARS	98	75.140	ENSHBUG00000018909	yars	100	75.140	Haplochromis_burtoni
ENSGALG00000003563	YARS	99	85.849	ENSHGLG00000013843	YARS	94	85.849	Heterocephalus_glaber_female
ENSGALG00000003563	YARS	68	83.651	ENSHGLG00100020546	-	99	83.651	Heterocephalus_glaber_male
ENSGALG00000003563	YARS	98	84.848	ENSHGLG00100002785	-	100	84.848	Heterocephalus_glaber_male
ENSGALG00000003563	YARS	98	74.259	ENSHCOG00000006672	yars	100	75.046	Hippocampus_comes
ENSGALG00000003563	YARS	98	77.757	ENSIPUG00000021749	yars	99	77.757	Ictalurus_punctatus
ENSGALG00000003563	YARS	99	86.792	ENSSTOG00000012031	YARS	94	86.792	Ictidomys_tridecemlineatus
ENSGALG00000003563	YARS	99	85.150	ENSJJAG00000013281	Yars	94	85.150	Jaculus_jaculus
ENSGALG00000003563	YARS	97	76.996	ENSKMAG00000021752	yars	99	77.376	Kryptolebias_marmoratus
ENSGALG00000003563	YARS	97	77.316	ENSLBEG00000024080	yars	99	78.072	Labrus_bergylta
ENSGALG00000003563	YARS	97	80.460	ENSLACG00000015577	YARS	99	80.460	Latimeria_chalumnae
ENSGALG00000003563	YARS	97	82.917	ENSLOCG00000002165	yars	99	82.917	Lepisosteus_oculatus
ENSGALG00000003563	YARS	99	85.393	ENSLAFG00000003786	YARS	97	85.393	Loxodonta_africana
ENSGALG00000003563	YARS	98	82.576	ENSMFAG00000040933	YARS	100	82.576	Macaca_fascicularis
ENSGALG00000003563	YARS	98	87.879	ENSMMUG00000019746	YARS	100	87.879	Macaca_mulatta
ENSGALG00000003563	YARS	98	82.420	ENSMNEG00000031865	YARS	100	82.420	Macaca_nemestrina
ENSGALG00000003563	YARS	98	87.689	ENSMLEG00000041315	YARS	100	87.689	Mandrillus_leucophaeus
ENSGALG00000003563	YARS	98	77.068	ENSMAMG00000006092	yars	100	77.632	Mastacembelus_armatus
ENSGALG00000003563	YARS	98	74.484	ENSMZEG00005011426	yars	100	75.047	Maylandia_zebra
ENSGALG00000003563	YARS	95	97.446	ENSMGAG00000005063	YARS	97	97.446	Meleagris_gallopavo
ENSGALG00000003563	YARS	96	88.304	ENSMAUG00000021126	Yars	99	88.304	Mesocricetus_auratus
ENSGALG00000003563	YARS	99	87.079	ENSMICG00000011204	YARS	99	88.802	Microcebus_murinus
ENSGALG00000003563	YARS	99	86.629	ENSMOCG00000011342	Yars	94	86.629	Microtus_ochrogaster
ENSGALG00000003563	YARS	98	73.435	ENSMMOG00000021133	yars	99	74.088	Mola_mola
ENSGALG00000003563	YARS	97	86.398	ENSMODG00000017404	YARS	99	86.398	Monodelphis_domestica
ENSGALG00000003563	YARS	61	83.283	ENSMALG00000003648	yars	90	83.283	Monopterus_albus
ENSGALG00000003563	YARS	99	87.194	MGP_CAROLIEiJ_G0026513	Yars	94	87.194	Mus_caroli
ENSGALG00000003563	YARS	99	87.006	ENSMUSG00000028811	Yars	94	87.006	Mus_musculus
ENSGALG00000003563	YARS	99	86.629	MGP_PahariEiJ_G0028844	Yars	94	86.629	Mus_pahari
ENSGALG00000003563	YARS	99	87.006	MGP_SPRETEiJ_G0027493	Yars	94	87.006	Mus_spretus
ENSGALG00000003563	YARS	98	87.121	ENSMLUG00000000759	YARS	100	87.121	Myotis_lucifugus
ENSGALG00000003563	YARS	95	88.016	ENSNGAG00000001419	Yars	100	88.016	Nannospalax_galili
ENSGALG00000003563	YARS	98	76.471	ENSNBRG00000020413	yars	100	76.471	Neolamprologus_brichardi
ENSGALG00000003563	YARS	99	87.030	ENSNLEG00000002922	YARS	100	87.500	Nomascus_leucogenys
ENSGALG00000003563	YARS	74	82.353	ENSMEUG00000011824	-	75	82.353	Notamacropus_eugenii
ENSGALG00000003563	YARS	98	81.818	ENSOPRG00000003669	YARS	100	81.818	Ochotona_princeps
ENSGALG00000003563	YARS	98	86.174	ENSODEG00000005363	YARS	94	86.174	Octodon_degus
ENSGALG00000003563	YARS	98	75.327	ENSONIG00000015400	yars	99	76.560	Oreochromis_niloticus
ENSGALG00000003563	YARS	92	79.400	ENSOANG00000011779	YARS	100	79.400	Ornithorhynchus_anatinus
ENSGALG00000003563	YARS	98	87.121	ENSOCUG00000010007	YARS	100	87.121	Oryctolagus_cuniculus
ENSGALG00000003563	YARS	97	78.286	ENSORLG00000013982	yars	96	78.476	Oryzias_latipes
ENSGALG00000003563	YARS	98	77.966	ENSORLG00020020750	yars	100	78.531	Oryzias_latipes_hni
ENSGALG00000003563	YARS	98	77.298	ENSORLG00015008963	yars	100	77.861	Oryzias_latipes_hsok
ENSGALG00000003563	YARS	98	78.343	ENSOMEG00000013016	yars	95	86.752	Oryzias_melastigma
ENSGALG00000003563	YARS	98	88.068	ENSOGAG00000007359	YARS	100	88.068	Otolemur_garnettii
ENSGALG00000003563	YARS	99	87.335	ENSOARG00000020897	YARS	94	87.335	Ovis_aries
ENSGALG00000003563	YARS	99	87.054	ENSPPAG00000035791	YARS	99	87.356	Pan_paniscus
ENSGALG00000003563	YARS	98	86.932	ENSPPRG00000023768	YARS	100	86.932	Panthera_pardus
ENSGALG00000003563	YARS	98	86.932	ENSPTIG00000003438	YARS	100	86.932	Panthera_tigris_altaica
ENSGALG00000003563	YARS	99	87.054	ENSPTRG00000000491	YARS	100	87.500	Pan_troglodytes
ENSGALG00000003563	YARS	98	88.068	ENSPANG00000009804	YARS	100	88.068	Papio_anubis
ENSGALG00000003563	YARS	98	79.735	ENSPKIG00000024596	yars	100	79.735	Paramormyrops_kingsleyae
ENSGALG00000003563	YARS	97	75.763	ENSPSIG00000006945	YARS	99	75.763	Pelodiscus_sinensis
ENSGALG00000003563	YARS	97	77.927	ENSPMGG00000022917	yars	99	77.927	Periophthalmus_magnuspinnatus
ENSGALG00000003563	YARS	99	87.194	ENSPEMG00000010746	Yars	94	87.194	Peromyscus_maniculatus_bairdii
ENSGALG00000003563	YARS	98	86.148	ENSPCIG00000022457	YARS	99	86.148	Phascolarctos_cinereus
ENSGALG00000003563	YARS	97	77.376	ENSPFOG00000014808	yars	99	78.137	Poecilia_formosa
ENSGALG00000003563	YARS	97	77.376	ENSPLAG00000020075	yars	99	78.137	Poecilia_latipinna
ENSGALG00000003563	YARS	97	77.376	ENSPMEG00000002803	yars	99	78.137	Poecilia_mexicana
ENSGALG00000003563	YARS	97	78.119	ENSPREG00000018280	yars	99	78.119	Poecilia_reticulata
ENSGALG00000003563	YARS	98	85.311	ENSPPYG00000001585	YARS	100	85.311	Pongo_abelii
ENSGALG00000003563	YARS	75	85.786	ENSPCAG00000011170	YARS	76	85.786	Procavia_capensis
ENSGALG00000003563	YARS	98	87.500	ENSPCOG00000021026	YARS	100	87.500	Propithecus_coquereli
ENSGALG00000003563	YARS	98	86.742	ENSPVAG00000010984	YARS	100	86.742	Pteropus_vampyrus
ENSGALG00000003563	YARS	98	76.091	ENSPNYG00000000860	yars	100	76.281	Pundamilia_nyererei
ENSGALG00000003563	YARS	97	80.115	ENSPNAG00000009622	yars	99	80.115	Pygocentrus_nattereri
ENSGALG00000003563	YARS	99	86.064	ENSRNOG00000007213	Yars	94	86.064	Rattus_norvegicus
ENSGALG00000003563	YARS	54	75.347	ENSRBIG00000044271	-	86	75.347	Rhinopithecus_bieti
ENSGALG00000003563	YARS	98	87.689	ENSRROG00000039913	YARS	100	87.689	Rhinopithecus_roxellana
ENSGALG00000003563	YARS	98	87.689	ENSSBOG00000030205	YARS	100	87.695	Saimiri_boliviensis_boliviensis
ENSGALG00000003563	YARS	98	85.227	ENSSHAG00000011851	YARS	100	85.227	Sarcophilus_harrisii
ENSGALG00000003563	YARS	97	80.306	ENSSFOG00015007179	yars	99	80.306	Scleropages_formosus
ENSGALG00000003563	YARS	97	76.108	ENSSMAG00000020736	yars	98	76.108	Scophthalmus_maximus
ENSGALG00000003563	YARS	98	78.302	ENSSDUG00000001782	yars	99	79.198	Seriola_dumerili
ENSGALG00000003563	YARS	98	78.977	ENSSLDG00000008268	yars	99	80.077	Seriola_lalandi_dorsalis
ENSGALG00000003563	YARS	84	76.557	ENSSARG00000012227	-	86	76.557	Sorex_araneus
ENSGALG00000003563	YARS	97	89.080	ENSSPUG00000000333	YARS	99	89.080	Sphenodon_punctatus
ENSGALG00000003563	YARS	98	76.404	ENSSPAG00000020632	yars	100	73.157	Stegastes_partitus
ENSGALG00000003563	YARS	98	87.121	ENSSSCG00000030369	YARS	100	87.121	Sus_scrofa
ENSGALG00000003563	YARS	98	94.497	ENSTGUG00000001342	YARS	100	94.497	Taeniopygia_guttata
ENSGALG00000003563	YARS	98	78.558	ENSTRUG00000014099	yars	99	78.558	Takifugu_rubripes
ENSGALG00000003563	YARS	97	78.462	ENSTNIG00000009237	yars	99	78.462	Tetraodon_nigroviridis
ENSGALG00000003563	YARS	95	78.978	ENSTBEG00000014374	YARS	100	78.978	Tupaia_belangeri
ENSGALG00000003563	YARS	98	85.606	ENSTTRG00000014987	YARS	100	85.606	Tursiops_truncatus
ENSGALG00000003563	YARS	99	83.774	ENSUAMG00000000392	YARS	100	81.214	Ursus_americanus
ENSGALG00000003563	YARS	99	78.731	ENSUMAG00000008312	YARS	94	78.731	Ursus_maritimus
ENSGALG00000003563	YARS	98	75.992	ENSVPAG00000010958	YARS	100	75.992	Vicugna_pacos
ENSGALG00000003563	YARS	99	86.304	ENSVVUG00000015468	YARS	99	87.671	Vulpes_vulpes
ENSGALG00000003563	YARS	97	82.567	ENSXETG00000027865	yars	99	82.567	Xenopus_tropicalis
ENSGALG00000003563	YARS	94	76.667	ENSXMAG00000016348	yars	82	77.451	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	21873635.	IBA	Function
GO:0004831	tyrosine-tRNA ligase activity	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0006418	tRNA aminoacylation for protein translation	21873635.	IBA	Process
GO:0006437	tyrosyl-tRNA aminoacylation	-	IEA	Process
GO:0017101	aminoacyl-tRNA synthetase multienzyme complex	21873635.	IBA	Component
GO:0017102	methionyl glutamyl tRNA synthetase complex	21873635.	IBA	Component