EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000003765 (Gene tree)
Gene ID: 423680
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 19771 bases
Position: chr6:10482683-10502453
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000048156	DND1_DSRM	PF14709.7	1.8e-24	1	1
ENSGALP00000048156	RRM_1	PF00076.22	9.4e-41	1	3
ENSGALP00000048156	RRM_1	PF00076.22	9.4e-41	2	3
ENSGALP00000048156	RRM_1	PF00076.22	9.4e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000057851	A1CF-201	1737	-	ENSGALP00000048156	578 (aa)	-	A0A1D5P632

Gene Model

Click here to download ENSGALG00000003765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000003765's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000003765	A1CF	97	87.766	ENSG00000148584	A1CF	99	83.973	Homo_sapiens
ENSGALG00000003765	A1CF	96	73.239	ENSAPOG00000008259	a1cf	95	72.712	Acanthochromis_polyacanthus
ENSGALG00000003765	A1CF	97	87.544	ENSAMEG00000000523	A1CF	95	88.256	Ailuropoda_melanoleuca
ENSGALG00000003765	A1CF	96	75.172	ENSACIG00000008632	a1cf	95	76.552	Amphilophus_citrinellus
ENSGALG00000003765	A1CF	96	73.958	ENSAOCG00000023744	a1cf	86	85.897	Amphiprion_ocellaris
ENSGALG00000003765	A1CF	96	75.174	ENSAPEG00000009537	a1cf	94	75.868	Amphiprion_percula
ENSGALG00000003765	A1CF	96	75.387	ENSATEG00000013720	a1cf	95	76.764	Anabas_testudineus
ENSGALG00000003765	A1CF	97	96.057	ENSAPLG00000002964	A1CF	95	96.057	Anas_platyrhynchos
ENSGALG00000003765	A1CF	96	87.814	ENSACAG00000015269	A1CF	94	87.814	Anolis_carolinensis
ENSGALG00000003765	A1CF	97	86.525	ENSANAG00000019974	A1CF	99	84.060	Aotus_nancymaae
ENSGALG00000003765	A1CF	96	74.520	ENSACLG00000017428	a1cf	95	75.559	Astatotilapia_calliptera
ENSGALG00000003765	A1CF	91	77.941	ENSAMXG00000018180	a1cf	93	77.941	Astyanax_mexicanus
ENSGALG00000003765	A1CF	97	86.903	ENSBTAG00000021195	A1CF	94	89.147	Bos_taurus
ENSGALG00000003765	A1CF	97	88.298	ENSCJAG00000005045	A1CF	95	88.298	Callithrix_jacchus
ENSGALG00000003765	A1CF	97	88.592	ENSCAFG00000015581	A1CF	95	88.948	Canis_familiaris
ENSGALG00000003765	A1CF	97	88.592	ENSCAFG00020026421	A1CF	98	90.878	Canis_lupus_dingo
ENSGALG00000003765	A1CF	97	88.142	ENSCHIG00000020411	A1CF	95	88.142	Capra_hircus
ENSGALG00000003765	A1CF	99	84.838	ENSTSYG00000001755	A1CF	100	87.321	Carlito_syrichta
ENSGALG00000003765	A1CF	88	92.245	ENSCAPG00000017386	A1CF	90	92.245	Cavia_aperea
ENSGALG00000003765	A1CF	97	87.234	ENSCPOG00000009807	A1CF	95	87.766	Cavia_porcellus
ENSGALG00000003765	A1CF	97	88.455	ENSCCAG00000018168	A1CF	95	88.455	Cebus_capucinus
ENSGALG00000003765	A1CF	97	87.189	ENSCATG00000043715	A1CF	99	83.529	Cercocebus_atys
ENSGALG00000003765	A1CF	97	87.986	ENSCLAG00000010424	A1CF	95	87.986	Chinchilla_lanigera
ENSGALG00000003765	A1CF	97	88.968	ENSCSAG00000007032	A1CF	95	88.968	Chlorocebus_sabaeus
ENSGALG00000003765	A1CF	99	82.997	ENSCHOG00000009089	A1CF	99	83.502	Choloepus_hoffmanni
ENSGALG00000003765	A1CF	97	92.844	ENSCPBG00000026464	A1CF	95	92.844	Chrysemys_picta_bellii
ENSGALG00000003765	A1CF	97	88.790	ENSCANG00000038032	A1CF	95	88.790	Colobus_angolensis_palliatus
ENSGALG00000003765	A1CF	97	86.018	ENSCGRG00001017413	A1cf	95	86.018	Cricetulus_griseus_chok1gshd
ENSGALG00000003765	A1CF	97	85.310	ENSCGRG00000017332	A1cf	95	85.664	Cricetulus_griseus_crigri
ENSGALG00000003765	A1CF	96	76.491	ENSCSEG00000002361	a1cf	95	77.336	Cynoglossus_semilaevis
ENSGALG00000003765	A1CF	96	74.010	ENSCVAG00000010520	a1cf	96	75.212	Cyprinodon_variegatus
ENSGALG00000003765	A1CF	98	77.875	ENSDARG00000002968	a1cf	96	79.443	Danio_rerio
ENSGALG00000003765	A1CF	97	87.080	ENSDNOG00000002829	A1CF	95	87.611	Dasypus_novemcinctus
ENSGALG00000003765	A1CF	79	94.961	ENSETEG00000012527	A1CF	78	94.961	Echinops_telfairi
ENSGALG00000003765	A1CF	97	88.713	ENSEASG00005012924	A1CF	97	88.889	Equus_asinus_asinus
ENSGALG00000003765	A1CF	97	88.183	ENSECAG00000010424	A1CF	95	88.360	Equus_caballus
ENSGALG00000003765	A1CF	80	76.017	ENSEEUG00000000013	A1CF	100	76.017	Erinaceus_europaeus
ENSGALG00000003765	A1CF	97	79.329	ENSELUG00000003159	a1cf	95	80.389	Esox_lucius
ENSGALG00000003765	A1CF	96	87.879	ENSFCAG00000011179	A1CF	94	88.235	Felis_catus
ENSGALG00000003765	A1CF	97	93.369	ENSFALG00000013183	A1CF	95	93.369	Ficedula_albicollis
ENSGALG00000003765	A1CF	97	85.664	ENSFDAG00000019371	A1CF	95	85.841	Fukomys_damarensis
ENSGALG00000003765	A1CF	88	73.084	ENSFHEG00000019652	a1cf	90	74.953	Fundulus_heteroclitus
ENSGALG00000003765	A1CF	97	70.660	ENSGMOG00000018943	a1cf	95	70.486	Gadus_morhua
ENSGALG00000003765	A1CF	98	69.640	ENSGAFG00000014868	a1cf	95	69.811	Gambusia_affinis
ENSGALG00000003765	A1CF	98	73.459	ENSGACG00000010241	a1cf	95	74.144	Gasterosteus_aculeatus
ENSGALG00000003765	A1CF	99	90.815	ENSGAGG00000016508	A1CF	100	90.815	Gopherus_agassizii
ENSGALG00000003765	A1CF	97	87.943	ENSGGOG00000009670	A1CF	99	84.140	Gorilla_gorilla
ENSGALG00000003765	A1CF	96	75.345	ENSHBUG00000021959	a1cf	96	76.701	Haplochromis_burtoni
ENSGALG00000003765	A1CF	97	87.788	ENSHGLG00000008955	A1CF	95	87.788	Heterocephalus_glaber_female
ENSGALG00000003765	A1CF	97	87.080	ENSHGLG00100000518	A1CF	95	87.080	Heterocephalus_glaber_male
ENSGALG00000003765	A1CF	92	72.613	ENSHCOG00000017669	a1cf	96	73.639	Hippocampus_comes
ENSGALG00000003765	A1CF	86	83.564	ENSIPUG00000010367	a1cf	91	83.170	Ictalurus_punctatus
ENSGALG00000003765	A1CF	96	77.148	ENSKMAG00000006568	a1cf	96	77.288	Kryptolebias_marmoratus
ENSGALG00000003765	A1CF	96	74.871	ENSLBEG00000020994	a1cf	94	76.592	Labrus_bergylta
ENSGALG00000003765	A1CF	97	82.562	ENSLACG00000008061	A1CF	95	82.562	Latimeria_chalumnae
ENSGALG00000003765	A1CF	97	83.837	ENSLOCG00000006302	a1cf	95	83.837	Lepisosteus_oculatus
ENSGALG00000003765	A1CF	97	87.788	ENSLAFG00000015462	A1CF	95	88.142	Loxodonta_africana
ENSGALG00000003765	A1CF	97	87.544	ENSMFAG00000035948	A1CF	99	83.866	Macaca_fascicularis
ENSGALG00000003765	A1CF	99	86.395	ENSMMUG00000007077	A1CF	99	86.395	Macaca_mulatta
ENSGALG00000003765	A1CF	97	87.189	ENSMNEG00000031454	A1CF	99	84.590	Macaca_nemestrina
ENSGALG00000003765	A1CF	97	88.612	ENSMLEG00000037223	A1CF	95	88.612	Mandrillus_leucophaeus
ENSGALG00000003765	A1CF	96	73.529	ENSMAMG00000010402	a1cf	95	75.260	Mastacembelus_armatus
ENSGALG00000003765	A1CF	96	78.153	ENSMZEG00005013245	a1cf	94	79.218	Maylandia_zebra
ENSGALG00000003765	A1CF	97	98.927	ENSMGAG00000001507	A1CF	95	98.927	Meleagris_gallopavo
ENSGALG00000003765	A1CF	97	85.310	ENSMAUG00000007422	A1cf	95	85.664	Mesocricetus_auratus
ENSGALG00000003765	A1CF	99	84.264	ENSMICG00000003377	A1CF	99	84.433	Microcebus_murinus
ENSGALG00000003765	A1CF	97	86.018	ENSMOCG00000021536	A1cf	95	86.195	Microtus_ochrogaster
ENSGALG00000003765	A1CF	89	70.000	ENSMMOG00000009422	a1cf	95	68.221	Mola_mola
ENSGALG00000003765	A1CF	88	87.549	ENSMODG00000016478	A1CF	94	87.743	Monodelphis_domestica
ENSGALG00000003765	A1CF	96	72.954	ENSMALG00000012992	a1cf	94	72.954	Monopterus_albus
ENSGALG00000003765	A1CF	97	85.133	MGP_CAROLIEiJ_G0022873	A1cf	95	85.310	Mus_caroli
ENSGALG00000003765	A1CF	97	85.133	ENSMUSG00000052595	A1cf	99	89.527	Mus_musculus
ENSGALG00000003765	A1CF	97	84.602	MGP_PahariEiJ_G0014366	A1cf	95	84.602	Mus_pahari
ENSGALG00000003765	A1CF	97	84.956	MGP_SPRETEiJ_G0023792	A1cf	95	85.133	Mus_spretus
ENSGALG00000003765	A1CF	97	81.317	ENSMPUG00000016971	A1CF	95	82.028	Mustela_putorius_furo
ENSGALG00000003765	A1CF	97	86.726	ENSMLUG00000016071	A1CF	95	87.080	Myotis_lucifugus
ENSGALG00000003765	A1CF	97	86.372	ENSNGAG00000015136	A1cf	95	87.080	Nannospalax_galili
ENSGALG00000003765	A1CF	96	75.345	ENSNBRG00000001712	a1cf	96	76.701	Neolamprologus_brichardi
ENSGALG00000003765	A1CF	97	88.319	ENSNLEG00000012028	A1CF	99	84.874	Nomascus_leucogenys
ENSGALG00000003765	A1CF	96	88.351	ENSMEUG00000015909	A1CF	100	88.351	Notamacropus_eugenii
ENSGALG00000003765	A1CF	85	78.586	ENSOPRG00000010667	A1CF	92	78.044	Ochotona_princeps
ENSGALG00000003765	A1CF	96	76.207	ENSONIG00000019105	a1cf	96	76.871	Oreochromis_niloticus
ENSGALG00000003765	A1CF	75	86.697	ENSOANG00000007360	A1CF	92	86.697	Ornithorhynchus_anatinus
ENSGALG00000003765	A1CF	97	84.982	ENSOCUG00000011587	A1CF	95	85.336	Oryctolagus_cuniculus
ENSGALG00000003765	A1CF	98	75.387	ENSORLG00000013342	a1cf	95	75.387	Oryzias_latipes
ENSGALG00000003765	A1CF	98	75.768	ENSORLG00020000586	a1cf	96	76.280	Oryzias_latipes_hni
ENSGALG00000003765	A1CF	98	75.768	ENSORLG00015018569	a1cf	96	76.280	Oryzias_latipes_hsok
ENSGALG00000003765	A1CF	96	75.260	ENSOMEG00000013531	a1cf	95	75.260	Oryzias_melastigma
ENSGALG00000003765	A1CF	97	87.367	ENSOGAG00000012884	A1CF	95	87.722	Otolemur_garnettii
ENSGALG00000003765	A1CF	97	88.319	ENSOARG00000013695	A1CF	95	88.319	Ovis_aries
ENSGALG00000003765	A1CF	99	83.973	ENSPPAG00000028115	A1CF	94	92.009	Pan_paniscus
ENSGALG00000003765	A1CF	97	88.256	ENSPPRG00000012180	A1CF	95	88.612	Panthera_pardus
ENSGALG00000003765	A1CF	97	88.256	ENSPTIG00000021223	A1CF	95	88.612	Panthera_tigris_altaica
ENSGALG00000003765	A1CF	99	86.254	ENSPTRG00000002508	A1CF	99	86.426	Pan_troglodytes
ENSGALG00000003765	A1CF	97	87.544	ENSPANG00000021988	A1CF	99	83.866	Papio_anubis
ENSGALG00000003765	A1CF	97	81.449	ENSPKIG00000025176	a1cf	95	81.625	Paramormyrops_kingsleyae
ENSGALG00000003765	A1CF	97	90.877	ENSPSIG00000010318	A1CF	95	90.877	Pelodiscus_sinensis
ENSGALG00000003765	A1CF	95	66.058	ENSPMGG00000013359	a1cf	95	66.607	Periophthalmus_magnuspinnatus
ENSGALG00000003765	A1CF	97	87.080	ENSPEMG00000015021	A1cf	95	87.080	Peromyscus_maniculatus_bairdii
ENSGALG00000003765	A1CF	97	87.679	ENSPCIG00000002175	A1CF	95	87.679	Phascolarctos_cinereus
ENSGALG00000003765	A1CF	96	75.387	ENSPFOG00000007437	-	96	76.570	Poecilia_formosa
ENSGALG00000003765	A1CF	96	75.559	ENSPFOG00000006683	a1cf	96	76.740	Poecilia_formosa
ENSGALG00000003765	A1CF	96	74.182	ENSPLAG00000001210	-	96	75.382	Poecilia_latipinna
ENSGALG00000003765	A1CF	96	74.182	ENSPLAG00000000026	a1cf	96	75.382	Poecilia_latipinna
ENSGALG00000003765	A1CF	96	66.667	ENSPMEG00000000921	a1cf	94	68.394	Poecilia_mexicana
ENSGALG00000003765	A1CF	96	67.876	ENSPMEG00000015529	-	94	69.603	Poecilia_mexicana
ENSGALG00000003765	A1CF	96	75.731	ENSPREG00000016298	a1cf	96	76.740	Poecilia_reticulata
ENSGALG00000003765	A1CF	97	86.903	ENSPPYG00000002819	A1CF	95	87.080	Pongo_abelii
ENSGALG00000003765	A1CF	73	77.688	ENSPCAG00000006463	A1CF	68	80.556	Procavia_capensis
ENSGALG00000003765	A1CF	97	87.102	ENSPCOG00000024172	A1CF	95	87.456	Propithecus_coquereli
ENSGALG00000003765	A1CF	96	76.724	ENSPNYG00000017944	a1cf	95	78.621	Pundamilia_nyererei
ENSGALG00000003765	A1CF	96	79.371	ENSPNAG00000007704	a1cf	95	79.545	Pygocentrus_nattereri
ENSGALG00000003765	A1CF	97	84.425	ENSRNOG00000033195	A1cf	95	84.602	Rattus_norvegicus
ENSGALG00000003765	A1CF	97	82.092	ENSRBIG00000042892	A1CF	100	85.658	Rhinopithecus_bieti
ENSGALG00000003765	A1CF	97	88.968	ENSRROG00000041398	A1CF	100	86.903	Rhinopithecus_roxellana
ENSGALG00000003765	A1CF	97	88.496	ENSSBOG00000021930	A1CF	100	86.328	Saimiri_boliviensis_boliviensis
ENSGALG00000003765	A1CF	97	89.502	ENSSHAG00000005096	A1CF	95	89.502	Sarcophilus_harrisii
ENSGALG00000003765	A1CF	96	79.860	ENSSFOG00015011774	a1cf	95	80.210	Scleropages_formosus
ENSGALG00000003765	A1CF	96	75.559	ENSSMAG00000013271	a1cf	96	76.061	Scophthalmus_maximus
ENSGALG00000003765	A1CF	96	75.482	ENSSDUG00000013930	a1cf	94	76.532	Seriola_dumerili
ENSGALG00000003765	A1CF	96	69.338	ENSSLDG00000004290	a1cf	94	69.512	Seriola_lalandi_dorsalis
ENSGALG00000003765	A1CF	99	74.915	ENSSARG00000005940	A1CF	99	75.085	Sorex_araneus
ENSGALG00000003765	A1CF	99	87.075	ENSSPUG00000006797	A1CF	99	86.735	Sphenodon_punctatus
ENSGALG00000003765	A1CF	97	87.965	ENSSSCG00000010431	A1CF	95	88.142	Sus_scrofa
ENSGALG00000003765	A1CF	97	93.110	ENSTGUG00000005090	A1CF	95	93.110	Taeniopygia_guttata
ENSGALG00000003765	A1CF	96	75.345	ENSTRUG00000001982	a1cf	95	75.345	Takifugu_rubripes
ENSGALG00000003765	A1CF	96	75.773	ENSTNIG00000003580	a1cf	95	76.117	Tetraodon_nigroviridis
ENSGALG00000003765	A1CF	99	78.824	ENSTTRG00000013190	A1CF	99	78.992	Tursiops_truncatus
ENSGALG00000003765	A1CF	97	86.299	ENSUAMG00000020065	A1CF	95	86.655	Ursus_americanus
ENSGALG00000003765	A1CF	97	87.857	ENSUMAG00000011162	A1CF	99	86.995	Ursus_maritimus
ENSGALG00000003765	A1CF	88	83.908	ENSVPAG00000006130	A1CF	86	83.908	Vicugna_pacos
ENSGALG00000003765	A1CF	97	87.522	ENSVVUG00000002504	A1CF	95	87.701	Vulpes_vulpes
ENSGALG00000003765	A1CF	96	80.249	ENSXETG00000006611	a1cf	95	80.249	Xenopus_tropicalis
ENSGALG00000003765	A1CF	96	75.563	ENSXCOG00000003302	a1cf	96	76.239	Xiphophorus_couchianus
ENSGALG00000003765	A1CF	96	76.776	ENSXMAG00000016703	a1cf	95	77.990	Xiphophorus_maculatus