EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGALG00000003800 (Gene tree)
Gene ID
419674
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Gallus_gallus
Status
putative
Strand
Minus strand
Length
12001 bases
Position
chr23:5616117-5628117
Accession
419674
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGALP00000006018PABPPF00658.184.6e-3211
ENSGALP00000071213PABPPF00658.184.6e-3211
ENSGALP00000006018RRM_5PF13893.61.6e-0912
ENSGALP00000006018RRM_5PF13893.61.6e-0922
ENSGALP00000071213RRM_5PF13893.61.6e-0912
ENSGALP00000071213RRM_5PF13893.61.6e-0922
ENSGALP00000006018RRM_1PF00076.222.5e-9214
ENSGALP00000006018RRM_1PF00076.222.5e-9224
ENSGALP00000006018RRM_1PF00076.222.5e-9234
ENSGALP00000006018RRM_1PF00076.222.5e-9244
ENSGALP00000071213RRM_1PF00076.222.5e-9214
ENSGALP00000071213RRM_1PF00076.222.5e-9224
ENSGALP00000071213RRM_1PF00076.222.5e-9234
ENSGALP00000071213RRM_1PF00076.222.5e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGALT00000099100PABPC4-2012355-ENSGALP00000071213630 (aa)XP_015153392UPI0000E815BE
ENSGALT00000006028PABPC4-2022041-ENSGALP00000006018630 (aa)XP_015153392E1C903
Gene Model
Click here to download ENSGALG00000003800's gene model file
Pathways
Pathway IDPathway NameSource
gga03013RNA transportKEGG
gga03015mRNA surveillance pathwayKEGG
gga03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000003800's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGALG00000003800PABPC410091.746ENSG00000090621PABPC410097.674Homo_sapiens
ENSGALG00000003800PABPC49986.169ENSAPOG00000001161pabpc49986.142Acanthochromis_polyacanthus
ENSGALG00000003800PABPC49953.215ENSAMEG00000015083-9952.733Ailuropoda_melanoleuca
ENSGALG00000003800PABPC410087.860ENSAMEG00000011535-9987.860Ailuropoda_melanoleuca
ENSGALG00000003800PABPC410086.614ENSACIG00000023343pabpc49987.244Amphilophus_citrinellus
ENSGALG00000003800PABPC49986.328ENSAOCG00000021529pabpc49986.299Amphiprion_ocellaris
ENSGALG00000003800PABPC49986.328ENSAPEG00000019196pabpc49986.299Amphiprion_percula
ENSGALG00000003800PABPC49986.508ENSATEG00000007402pabpc49986.635Anabas_testudineus
ENSGALG00000003800PABPC410097.302ENSAPLG00000009729-10097.302Anas_platyrhynchos
ENSGALG00000003800PABPC49995.170ENSACAG00000002544PABPC410095.170Anolis_carolinensis
ENSGALG00000003800PABPC410091.746ENSANAG00000025079PABPC49991.746Aotus_nancymaae
ENSGALG00000003800PABPC410085.827ENSACLG00000019558pabpc49986.457Astatotilapia_calliptera
ENSGALG00000003800PABPC49982.092ENSAMXG00000018779pabpc49982.726Astyanax_mexicanus
ENSGALG00000003800PABPC45786.503ENSBTAG00000048536-9086.503Bos_taurus
ENSGALG00000003800PABPC410088.199ENSBTAG00000017125PABPC49988.354Bos_taurus
ENSGALG00000003800PABPC47882.787ENSCJAG00000045953-9282.716Callithrix_jacchus
ENSGALG00000003800PABPC410091.587ENSCJAG00000002512-9991.587Callithrix_jacchus
ENSGALG00000003800PABPC410092.063ENSCAFG00000003081PABPC49992.063Canis_familiaris
ENSGALG00000003800PABPC49692.537ENSCAFG00020004161PABPC49988.012Canis_lupus_dingo
ENSGALG00000003800PABPC410087.860ENSCHIG00000019398-9987.860Capra_hircus
ENSGALG00000003800PABPC410070.607ENSCHIG00000023385-9970.607Capra_hircus
ENSGALG00000003800PABPC410091.746ENSTSYG00000006532PABPC49991.746Carlito_syrichta
ENSGALG00000003800PABPC49991.561ENSCAPG00000015984PABPC49991.561Cavia_aperea
ENSGALG00000003800PABPC410091.746ENSCPOG00000009552PABPC49991.746Cavia_porcellus
ENSGALG00000003800PABPC410091.587ENSCCAG00000037306PABPC49991.587Cebus_capucinus
ENSGALG00000003800PABPC410091.746ENSCATG00000042164PABPC49991.746Cercocebus_atys
ENSGALG00000003800PABPC410091.746ENSCLAG00000011899PABPC49991.746Chinchilla_lanigera
ENSGALG00000003800PABPC410087.709ENSCSAG00000001135PABPC49987.709Chlorocebus_sabaeus
ENSGALG00000003800PABPC48691.557ENSCHOG00000005327PABPC48191.557Choloepus_hoffmanni
ENSGALG00000003800PABPC410097.302ENSCPBG00000001038PABPC410097.302Chrysemys_picta_bellii
ENSGALG00000003800PABPC49991.787ENSCANG00000034177PABPC49991.787Colobus_angolensis_palliatus
ENSGALG00000003800PABPC49989.228ENSCGRG00001018166Pabpc410087.559Cricetulus_griseus_chok1gshd
ENSGALG00000003800PABPC49889.396ENSCGRG00000009777Pabpc410087.700Cricetulus_griseus_crigri
ENSGALG00000003800PABPC49985.331ENSCSEG00000000130pabpc49985.962Cynoglossus_semilaevis
ENSGALG00000003800PABPC49986.581ENSCVAG00000019246pabpc49987.220Cyprinodon_variegatus
ENSGALG00000003800PABPC49988.057ENSDARG00000059259pabpc49988.595Danio_rerio
ENSGALG00000003800PABPC49991.413ENSDNOG00000018444-9991.413Dasypus_novemcinctus
ENSGALG00000003800PABPC410088.802ENSDORG00000011581Pabpc49988.802Dipodomys_ordii
ENSGALG00000003800PABPC48759.707ENSETEG00000009172-9959.707Echinops_telfairi
ENSGALG00000003800PABPC410095.312ENSETEG00000018453-8495.312Echinops_telfairi
ENSGALG00000003800PABPC49778.191ENSEBUG00000013782pabpc49977.725Eptatretus_burgeri
ENSGALG00000003800PABPC49978.344ENSEBUG00000000992pabpc49977.671Eptatretus_burgeri
ENSGALG00000003800PABPC410087.860ENSEASG00005014119PABPC49987.860Equus_asinus_asinus
ENSGALG00000003800PABPC410087.860ENSECAG00000009396PABPC49987.860Equus_caballus
ENSGALG00000003800PABPC49886.090ENSEEUG00000002962PABPC49985.736Erinaceus_europaeus
ENSGALG00000003800PABPC49986.624ENSELUG00000003195pabpc49987.046Esox_lucius
ENSGALG00000003800PABPC410092.063ENSFCAG00000015254-9992.063Felis_catus
ENSGALG00000003800PABPC410096.667ENSFALG00000000543PABPC410096.667Ficedula_albicollis
ENSGALG00000003800PABPC410086.191ENSFDAG00000020016-9987.405Fukomys_damarensis
ENSGALG00000003800PABPC49058.422ENSFDAG00000010581-10055.536Fukomys_damarensis
ENSGALG00000003800PABPC410085.984ENSFHEG00000007548pabpc49986.614Fundulus_heteroclitus
ENSGALG00000003800PABPC49985.016ENSGMOG00000019025pabpc49985.647Gadus_morhua
ENSGALG00000003800PABPC410085.940ENSGAFG00000018195pabpc49897.222Gambusia_affinis
ENSGALG00000003800PABPC49984.409ENSGACG00000007179pabpc49985.039Gasterosteus_aculeatus
ENSGALG00000003800PABPC410096.984ENSGAGG00000001888PABPC410096.984Gopherus_agassizii
ENSGALG00000003800PABPC410091.746ENSGGOG00000004002PABPC49991.746Gorilla_gorilla
ENSGALG00000003800PABPC410085.669ENSHBUG00000020206pabpc49986.299Haplochromis_burtoni
ENSGALG00000003800PABPC410091.587ENSHGLG00000011162PABPC49991.587Heterocephalus_glaber_female
ENSGALG00000003800PABPC410091.587ENSHGLG00100001580PABPC49991.587Heterocephalus_glaber_male
ENSGALG00000003800PABPC49985.624ENSHCOG00000012694pabpc49986.256Hippocampus_comes
ENSGALG00000003800PABPC49885.875ENSIPUG00000016620pabpc49985.984Ictalurus_punctatus
ENSGALG00000003800PABPC410089.683ENSSTOG00000010416PABPC49988.889Ictidomys_tridecemlineatus
ENSGALG00000003800PABPC410086.781ENSJJAG00000007781Pabpc49986.781Jaculus_jaculus
ENSGALG00000003800PABPC410085.220ENSKMAG00000013597pabpc49985.849Kryptolebias_marmoratus
ENSGALG00000003800PABPC49985.489ENSLBEG00000013654pabpc49984.724Labrus_bergylta
ENSGALG00000003800PABPC410092.587ENSLACG00000011907PABPC410092.587Latimeria_chalumnae
ENSGALG00000003800PABPC49989.291ENSLOCG00000001877pabpc49990.079Lepisosteus_oculatus
ENSGALG00000003800PABPC410090.159ENSLAFG00000000151PABPC49990.159Loxodonta_africana
ENSGALG00000003800PABPC410091.746ENSMFAG00000041481PABPC49991.746Macaca_fascicularis
ENSGALG00000003800PABPC410087.709ENSMMUG00000007497PABPC49987.709Macaca_mulatta
ENSGALG00000003800PABPC410091.587ENSMNEG00000043054PABPC49991.587Macaca_nemestrina
ENSGALG00000003800PABPC410091.746ENSMLEG00000040716PABPC49991.746Mandrillus_leucophaeus
ENSGALG00000003800PABPC49985.851ENSMAMG00000010025pabpc49986.142Mastacembelus_armatus
ENSGALG00000003800PABPC410085.669ENSMZEG00005006141pabpc49986.299Maylandia_zebra
ENSGALG00000003800PABPC49995.400ENSMGAG00000005408PABPC410095.400Meleagris_gallopavo
ENSGALG00000003800PABPC45782.635ENSMAUG00000004089-9280.702Mesocricetus_auratus
ENSGALG00000003800PABPC47694.792ENSMAUG00000019763-8489.908Mesocricetus_auratus
ENSGALG00000003800PABPC47284.135ENSMAUG00000001295-9784.135Mesocricetus_auratus
ENSGALG00000003800PABPC49978.470ENSMICG00000036729-9978.470Microcebus_murinus
ENSGALG00000003800PABPC48988.036ENSMICG00000016633-10089.107Microcebus_murinus
ENSGALG00000003800PABPC49991.840ENSMOCG00000006763Pabpc49991.270Microtus_ochrogaster
ENSGALG00000003800PABPC410083.254ENSMMOG00000002363pabpc49984.385Mola_mola
ENSGALG00000003800PABPC45973.867ENSMODG00000018051-9673.867Monodelphis_domestica
ENSGALG00000003800PABPC410089.787ENSMODG00000017657-10089.787Monodelphis_domestica
ENSGALG00000003800PABPC49985.737ENSMALG00000011017pabpc49985.714Monopterus_albus
ENSGALG00000003800PABPC410085.432MGP_CAROLIEiJ_G0026435-10097.872Mus_caroli
ENSGALG00000003800PABPC49977.718MGP_CAROLIEiJ_G0024864-9977.718Mus_caroli
ENSGALG00000003800PABPC410090.952ENSMUSG00000011257Pabpc410096.429Mus_musculus
ENSGALG00000003800PABPC49985.846MGP_PahariEiJ_G0028765Pabpc410098.582Mus_pahari
ENSGALG00000003800PABPC49971.355MGP_SPRETEiJ_G0027415Pabpc410097.872Mus_spretus
ENSGALG00000003800PABPC49550.000ENSMPUG00000006836-10049.585Mustela_putorius_furo
ENSGALG00000003800PABPC410088.012ENSMPUG00000014414-9988.012Mustela_putorius_furo
ENSGALG00000003800PABPC410090.000ENSMLUG00000012068PABPC49990.000Myotis_lucifugus
ENSGALG00000003800PABPC410090.000ENSNGAG00000018292Pabpc49990.000Nannospalax_galili
ENSGALG00000003800PABPC46097.115ENSNBRG00000009708pabpc49897.115Neolamprologus_brichardi
ENSGALG00000003800PABPC46691.071ENSNBRG00000010047-7291.071Neolamprologus_brichardi
ENSGALG00000003800PABPC410091.746ENSNLEG00000011928PABPC49991.746Nomascus_leucogenys
ENSGALG00000003800PABPC48592.842ENSOPRG00000011984PABPC48792.842Ochotona_princeps
ENSGALG00000003800PABPC45384.286ENSODEG00000013457-10084.286Octodon_degus
ENSGALG00000003800PABPC410091.270ENSODEG00000006592-9991.270Octodon_degus
ENSGALG00000003800PABPC49980.761ENSODEG00000017434-9980.973Octodon_degus
ENSGALG00000003800PABPC410085.669ENSONIG00000008176pabpc49986.299Oreochromis_niloticus
ENSGALG00000003800PABPC410095.714ENSOANG00000010001PABPC410095.714Ornithorhynchus_anatinus
ENSGALG00000003800PABPC49687.658ENSOCUG00000000562PABPC48887.658Oryctolagus_cuniculus
ENSGALG00000003800PABPC49992.901ENSORLG00000017479pabpc49992.901Oryzias_latipes
ENSGALG00000003800PABPC49992.901ENSORLG00020018644pabpc49992.901Oryzias_latipes_hni
ENSGALG00000003800PABPC49992.901ENSORLG00015015042pabpc49992.901Oryzias_latipes_hsok
ENSGALG00000003800PABPC49985.987ENSOMEG00000014410pabpc49986.006Oryzias_melastigma
ENSGALG00000003800PABPC410087.771ENSOGAG00000004067PABPC49987.926Otolemur_garnettii
ENSGALG00000003800PABPC410087.860ENSOARG00000020060PABPC49987.860Ovis_aries
ENSGALG00000003800PABPC410091.746ENSPPAG00000043625PABPC49991.746Pan_paniscus
ENSGALG00000003800PABPC410092.063ENSPPRG00000024727PABPC49992.063Panthera_pardus
ENSGALG00000003800PABPC410092.063ENSPTIG00000005829PABPC49992.063Panthera_tigris_altaica
ENSGALG00000003800PABPC410091.746ENSPTRG00000000573PABPC49991.746Pan_troglodytes
ENSGALG00000003800PABPC410091.905ENSPANG00000009484PABPC49991.905Papio_anubis
ENSGALG00000003800PABPC49987.956ENSPKIG00000025356pabpc49888.590Paramormyrops_kingsleyae
ENSGALG00000003800PABPC410097.460ENSPSIG00000016892PABPC410097.460Pelodiscus_sinensis
ENSGALG00000003800PABPC410083.438ENSPMGG00000009073pabpc49982.677Periophthalmus_magnuspinnatus
ENSGALG00000003800PABPC49986.054ENSPEMG00000024193-9986.054Peromyscus_maniculatus_bairdii
ENSGALG00000003800PABPC410090.794ENSPEMG00000023569-9990.794Peromyscus_maniculatus_bairdii
ENSGALG00000003800PABPC48975.217ENSPMAG00000002836pabpc410075.737Petromyzon_marinus
ENSGALG00000003800PABPC49772.597ENSPMAG00000007885pabpc49972.600Petromyzon_marinus
ENSGALG00000003800PABPC410093.810ENSPCIG00000020674PABPC410097.852Phascolarctos_cinereus
ENSGALG00000003800PABPC410085.039ENSPFOG00000002682pabpc49986.299Poecilia_formosa
ENSGALG00000003800PABPC410085.197ENSPLAG00000010112pabpc49986.457Poecilia_latipinna
ENSGALG00000003800PABPC49985.692ENSPMEG00000019739pabpc49986.299Poecilia_mexicana
ENSGALG00000003800PABPC410085.984ENSPREG00000001589pabpc49986.614Poecilia_reticulata
ENSGALG00000003800PABPC410087.709ENSPPYG00000001506PABPC49987.709Pongo_abelii
ENSGALG00000003800PABPC410083.156ENSPCAG00000003341PABPC49983.156Procavia_capensis
ENSGALG00000003800PABPC410090.967ENSPCOG00000023725-9991.125Propithecus_coquereli
ENSGALG00000003800PABPC49972.982ENSPCOG00000025882-9586.000Propithecus_coquereli
ENSGALG00000003800PABPC49987.037ENSPVAG00000002187PABPC49987.037Pteropus_vampyrus
ENSGALG00000003800PABPC410085.827ENSPNYG00000006134pabpc49986.457Pundamilia_nyererei
ENSGALG00000003800PABPC49986.478ENSPNAG00000024355pabpc49987.107Pygocentrus_nattereri
ENSGALG00000003800PABPC410088.180ENSRNOG00000015642Pabpc49988.180Rattus_norvegicus
ENSGALG00000003800PABPC410086.003ENSRNOG00000028592AABR07035074.19986.003Rattus_norvegicus
ENSGALG00000003800PABPC410091.746ENSRBIG00000039761PABPC49991.746Rhinopithecus_bieti
ENSGALG00000003800PABPC410091.746ENSRROG00000033355PABPC49991.746Rhinopithecus_roxellana
ENSGALG00000003800PABPC410091.746ENSSBOG00000026193PABPC49991.746Saimiri_boliviensis_boliviensis
ENSGALG00000003800PABPC410093.651ENSSHAG00000018139PABPC410093.651Sarcophilus_harrisii
ENSGALG00000003800PABPC49989.474ENSSFOG00015023514pabpc49989.474Scleropages_formosus
ENSGALG00000003800PABPC49985.443ENSSMAG00000009007pabpc49986.234Scophthalmus_maximus
ENSGALG00000003800PABPC49986.328ENSSDUG00000012683pabpc49986.299Seriola_dumerili
ENSGALG00000003800PABPC49986.328ENSSLDG00000013025pabpc49986.299Seriola_lalandi_dorsalis
ENSGALG00000003800PABPC410081.032ENSSARG00000000310PABPC49981.032Sorex_araneus
ENSGALG00000003800PABPC410096.032ENSSPUG00000003204PABPC410096.032Sphenodon_punctatus
ENSGALG00000003800PABPC49986.486ENSSPAG00000009252pabpc49986.457Stegastes_partitus
ENSGALG00000003800PABPC410091.905ENSSSCG00000003660-9991.905Sus_scrofa
ENSGALG00000003800PABPC48945.567ENSSSCG00000036170-9646.372Sus_scrofa
ENSGALG00000003800PABPC410092.284ENSTGUG00000001266PABPC410092.284Taeniopygia_guttata
ENSGALG00000003800PABPC49985.285ENSTRUG00000005907pabpc49985.918Takifugu_rubripes
ENSGALG00000003800PABPC49981.369ENSTNIG00000016902pabpc49981.369Tetraodon_nigroviridis
ENSGALG00000003800PABPC49977.273ENSTBEG00000009035PABPC49977.273Tupaia_belangeri
ENSGALG00000003800PABPC49971.785ENSTTRG00000014340PABPC49976.263Tursiops_truncatus
ENSGALG00000003800PABPC410092.063ENSUAMG00000000303PABPC49992.063Ursus_americanus
ENSGALG00000003800PABPC410091.667ENSUMAG00000019585PABPC49992.233Ursus_maritimus
ENSGALG00000003800PABPC47972.566ENSVPAG00000010041PABPC47372.566Vicugna_pacos
ENSGALG00000003800PABPC410092.063ENSVVUG00000005215PABPC49992.063Vulpes_vulpes
ENSGALG00000003800PABPC410087.778ENSXETG00000010946pabpc410087.778Xenopus_tropicalis
ENSGALG00000003800PABPC46198.214ENSXETG00000027221-10098.214Xenopus_tropicalis
ENSGALG00000003800PABPC49984.119ENSXCOG00000013190pabpc49692.925Xiphophorus_couchianus
ENSGALG00000003800PABPC410085.827ENSXMAG00000019007pabpc49986.457Xiphophorus_maculatus

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