EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000003895 (Gene tree)
Gene ID: 417183
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 6126 bases
Position: chr17:6255537-6261662
Accession: 417183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000006182	zf-C2H2	PF00096.26	2.8e-12	1	2
ENSGALP00000006182	zf-C2H2	PF00096.26	2.8e-12	2	2
ENSGALP00000006182	zf-met	PF12874.7	6.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000006192	PRDM12-201	1056	-	ENSGALP00000006182	351 (aa)	XP_415465	E1C6K0

Gene Model

Click here to download ENSGALG00000003895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000003895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000003895	PRDM12	94	92.814	ENSG00000130711	PRDM12	100	88.283	Homo_sapiens
ENSGALG00000003895	PRDM12	99	68.493	ENSAPOG00000018234	-	100	68.493	Acanthochromis_polyacanthus
ENSGALG00000003895	PRDM12	99	76.302	ENSAPOG00000016051	prdm12b	100	76.823	Acanthochromis_polyacanthus
ENSGALG00000003895	PRDM12	91	91.641	ENSAMEG00000016234	PRDM12	99	91.641	Ailuropoda_melanoleuca
ENSGALG00000003895	PRDM12	99	78.457	ENSACIG00000019578	prdm12b	100	78.723	Amphilophus_citrinellus
ENSGALG00000003895	PRDM12	99	78.892	ENSACIG00000005193	-	100	78.892	Amphilophus_citrinellus
ENSGALG00000003895	PRDM12	99	77.368	ENSAOCG00000015040	prdm12b	100	77.632	Amphiprion_ocellaris
ENSGALG00000003895	PRDM12	100	73.890	ENSAPEG00000022849	-	100	74.935	Amphiprion_percula
ENSGALG00000003895	PRDM12	99	77.984	ENSAPEG00000015092	prdm12b	100	78.249	Amphiprion_percula
ENSGALG00000003895	PRDM12	95	82.647	ENSATEG00000014595	-	99	82.647	Anabas_testudineus
ENSGALG00000003895	PRDM12	96	92.941	ENSANAG00000020616	PRDM12	100	92.941	Aotus_nancymaae
ENSGALG00000003895	PRDM12	99	80.939	ENSACLG00000011876	prdm12b	100	80.939	Astatotilapia_calliptera
ENSGALG00000003895	PRDM12	99	75.888	ENSACLG00000007631	-	100	77.411	Astatotilapia_calliptera
ENSGALG00000003895	PRDM12	99	83.784	ENSAMXG00000033665	prdm12b	100	85.676	Astyanax_mexicanus
ENSGALG00000003895	PRDM12	99	81.564	ENSAMXG00000008540	PRDM12	100	81.564	Astyanax_mexicanus
ENSGALG00000003895	PRDM12	94	93.413	ENSBTAG00000023797	PRDM12	100	90.305	Bos_taurus
ENSGALG00000003895	PRDM12	94	93.114	ENSCJAG00000020540	PRDM12	100	90.278	Callithrix_jacchus
ENSGALG00000003895	PRDM12	82	93.471	ENSCAFG00000023076	PRDM12	99	89.097	Canis_familiaris
ENSGALG00000003895	PRDM12	94	93.713	ENSCAFG00020024046	PRDM12	100	89.835	Canis_lupus_dingo
ENSGALG00000003895	PRDM12	94	93.713	ENSCHIG00000025005	PRDM12	100	90.331	Capra_hircus
ENSGALG00000003895	PRDM12	88	92.971	ENSCPOG00000005901	PRDM12	95	92.971	Cavia_porcellus
ENSGALG00000003895	PRDM12	94	93.114	ENSCCAG00000037485	PRDM12	100	89.532	Cebus_capucinus
ENSGALG00000003895	PRDM12	94	93.114	ENSCATG00000020327	PRDM12	100	89.532	Cercocebus_atys
ENSGALG00000003895	PRDM12	94	92.515	ENSCLAG00000005499	PRDM12	92	92.515	Chinchilla_lanigera
ENSGALG00000003895	PRDM12	94	93.114	ENSCSAG00000014756	PRDM12	100	89.286	Chlorocebus_sabaeus
ENSGALG00000003895	PRDM12	100	96.893	ENSCPBG00000022628	PRDM12	100	96.893	Chrysemys_picta_bellii
ENSGALG00000003895	PRDM12	94	93.114	ENSCGRG00001015005	Prdm12	100	88.798	Cricetulus_griseus_chok1gshd
ENSGALG00000003895	PRDM12	99	79.784	ENSCVAG00000017166	prdm12b	100	80.593	Cyprinodon_variegatus
ENSGALG00000003895	PRDM12	99	75.385	ENSCVAG00000000944	-	100	76.154	Cyprinodon_variegatus
ENSGALG00000003895	PRDM12	99	86.339	ENSDARG00000007430	prdm12b	100	86.339	Danio_rerio
ENSGALG00000003895	PRDM12	94	92.814	ENSDNOG00000042302	PRDM12	99	89.751	Dasypus_novemcinctus
ENSGALG00000003895	PRDM12	87	65.179	ENSEBUG00000016780	prdm12b	75	66.667	Eptatretus_burgeri
ENSGALG00000003895	PRDM12	96	93.235	ENSEASG00005008472	PRDM12	100	90.055	Equus_asinus_asinus
ENSGALG00000003895	PRDM12	96	92.941	ENSECAG00000005933	PRDM12	100	89.779	Equus_caballus
ENSGALG00000003895	PRDM12	99	83.784	ENSELUG00000009905	prdm12b	100	83.784	Esox_lucius
ENSGALG00000003895	PRDM12	99	80.000	ENSELUG00000013674	PRDM12	99	80.000	Esox_lucius
ENSGALG00000003895	PRDM12	94	93.713	ENSFCAG00000043086	PRDM12	100	90.083	Felis_catus
ENSGALG00000003895	PRDM12	100	100.000	ENSFALG00000001445	PRDM12	89	100.000	Ficedula_albicollis
ENSGALG00000003895	PRDM12	99	78.036	ENSFHEG00000007746	-	100	78.036	Fundulus_heteroclitus
ENSGALG00000003895	PRDM12	99	78.877	ENSFHEG00000003944	prdm12b	100	80.214	Fundulus_heteroclitus
ENSGALG00000003895	PRDM12	99	81.921	ENSGMOG00000011797	prdm12b	99	81.921	Gadus_morhua
ENSGALG00000003895	PRDM12	100	78.836	ENSGAFG00000010827	prdm12b	100	80.159	Gambusia_affinis
ENSGALG00000003895	PRDM12	100	79.245	ENSGACG00000016713	prdm12b	100	79.245	Gasterosteus_aculeatus
ENSGALG00000003895	PRDM12	100	97.175	ENSGAGG00000014083	PRDM12	100	97.175	Gopherus_agassizii
ENSGALG00000003895	PRDM12	94	92.515	ENSGGOG00000010568	PRDM12	100	88.251	Gorilla_gorilla
ENSGALG00000003895	PRDM12	99	79.679	ENSHBUG00000022878	prdm12b	100	79.679	Haplochromis_burtoni
ENSGALG00000003895	PRDM12	99	75.888	ENSHBUG00000022537	-	93	77.411	Haplochromis_burtoni
ENSGALG00000003895	PRDM12	94	91.916	ENSHGLG00000013939	PRDM12	100	87.671	Heterocephalus_glaber_female
ENSGALG00000003895	PRDM12	91	80.702	ENSHCOG00000003663	prdm12b	100	74.235	Hippocampus_comes
ENSGALG00000003895	PRDM12	99	75.207	ENSHCOG00000021167	-	100	75.207	Hippocampus_comes
ENSGALG00000003895	PRDM12	99	79.224	ENSIPUG00000019544	PRDM12	100	79.224	Ictalurus_punctatus
ENSGALG00000003895	PRDM12	99	84.783	ENSIPUG00000017053	prdm12b	100	85.326	Ictalurus_punctatus
ENSGALG00000003895	PRDM12	95	93.491	ENSSTOG00000005986	PRDM12	88	93.491	Ictidomys_tridecemlineatus
ENSGALG00000003895	PRDM12	93	93.333	ENSJJAG00000005424	Prdm12	100	93.333	Jaculus_jaculus
ENSGALG00000003895	PRDM12	99	73.020	ENSKMAG00000016921	prdm12b	100	73.515	Kryptolebias_marmoratus
ENSGALG00000003895	PRDM12	94	83.432	ENSKMAG00000021205	-	99	81.232	Kryptolebias_marmoratus
ENSGALG00000003895	PRDM12	99	77.719	ENSLBEG00000017769	prdm12b	100	78.249	Labrus_bergylta
ENSGALG00000003895	PRDM12	99	77.895	ENSLBEG00000007776	-	100	78.421	Labrus_bergylta
ENSGALG00000003895	PRDM12	99	92.351	ENSLACG00000017560	PRDM12	99	92.351	Latimeria_chalumnae
ENSGALG00000003895	PRDM12	99	87.603	ENSLOCG00000005429	prdm12b	99	87.879	Lepisosteus_oculatus
ENSGALG00000003895	PRDM12	94	92.059	ENSLAFG00000006979	PRDM12	93	91.931	Loxodonta_africana
ENSGALG00000003895	PRDM12	100	86.649	ENSMFAG00000040322	PRDM12	100	88.828	Macaca_fascicularis
ENSGALG00000003895	PRDM12	94	93.114	ENSMNEG00000037234	PRDM12	100	89.532	Macaca_nemestrina
ENSGALG00000003895	PRDM12	99	78.877	ENSMAMG00000013212	prdm12b	100	79.412	Mastacembelus_armatus
ENSGALG00000003895	PRDM12	99	76.289	ENSMAMG00000018988	-	100	77.062	Mastacembelus_armatus
ENSGALG00000003895	PRDM12	99	75.505	ENSMZEG00005000415	PRDM12	100	77.020	Maylandia_zebra
ENSGALG00000003895	PRDM12	98	100.000	ENSMGAG00000005438	PRDM12	98	100.000	Meleagris_gallopavo
ENSGALG00000003895	PRDM12	100	89.041	ENSMAUG00000013040	Prdm12	100	89.041	Mesocricetus_auratus
ENSGALG00000003895	PRDM12	96	93.255	ENSMICG00000015480	PRDM12	100	90.055	Microcebus_murinus
ENSGALG00000003895	PRDM12	99	91.453	ENSMOCG00000021026	Prdm12	93	93.255	Microtus_ochrogaster
ENSGALG00000003895	PRDM12	100	96.338	ENSMODG00000012108	PRDM12	100	96.338	Monodelphis_domestica
ENSGALG00000003895	PRDM12	99	68.207	ENSMALG00000021901	prdm12b	99	68.207	Monopterus_albus
ENSGALG00000003895	PRDM12	94	92.814	MGP_CAROLIEiJ_G0023414	Prdm12	100	88.767	Mus_caroli
ENSGALG00000003895	PRDM12	94	92.814	ENSMUSG00000079466	Prdm12	100	88.767	Mus_musculus
ENSGALG00000003895	PRDM12	94	92.814	MGP_PahariEiJ_G0024871	Prdm12	100	88.767	Mus_pahari
ENSGALG00000003895	PRDM12	94	92.814	MGP_SPRETEiJ_G0024331	Prdm12	100	88.767	Mus_spretus
ENSGALG00000003895	PRDM12	92	93.272	ENSNGAG00000018480	Prdm12	100	88.827	Nannospalax_galili
ENSGALG00000003895	PRDM12	99	76.923	ENSNBRG00000024312	-	100	77.198	Neolamprologus_brichardi
ENSGALG00000003895	PRDM12	99	78.780	ENSNBRG00000006727	prdm12b	100	79.045	Neolamprologus_brichardi
ENSGALG00000003895	PRDM12	100	85.634	ENSMEUG00000003828	PRDM12	100	85.634	Notamacropus_eugenii
ENSGALG00000003895	PRDM12	93	92.727	ENSOPRG00000008680	PRDM12	100	92.727	Ochotona_princeps
ENSGALG00000003895	PRDM12	96	92.669	ENSODEG00000016282	PRDM12	64	92.669	Octodon_degus
ENSGALG00000003895	PRDM12	62	96.313	ENSOANG00000001043	PRDM12	100	96.313	Ornithorhynchus_anatinus
ENSGALG00000003895	PRDM12	88	88.498	ENSOCUG00000008241	PRDM12	100	88.498	Oryctolagus_cuniculus
ENSGALG00000003895	PRDM12	99	74.103	ENSORLG00000017558	-	100	75.897	Oryzias_latipes
ENSGALG00000003895	PRDM12	100	77.309	ENSORLG00000007114	prdm12b	100	77.573	Oryzias_latipes
ENSGALG00000003895	PRDM12	100	75.853	ENSORLG00020019565	prdm12b	100	77.487	Oryzias_latipes_hni
ENSGALG00000003895	PRDM12	99	73.913	ENSORLG00020013167	-	100	75.703	Oryzias_latipes_hni
ENSGALG00000003895	PRDM12	100	76.517	ENSORLG00015007621	prdm12b	100	77.573	Oryzias_latipes_hsok
ENSGALG00000003895	PRDM12	99	74.615	ENSORLG00015003435	-	100	76.410	Oryzias_latipes_hsok
ENSGALG00000003895	PRDM12	100	76.240	ENSOMEG00000004134	prdm12b	100	77.546	Oryzias_melastigma
ENSGALG00000003895	PRDM12	99	78.249	ENSOMEG00000007762	-	100	78.515	Oryzias_melastigma
ENSGALG00000003895	PRDM12	94	93.694	ENSOGAG00000007557	PRDM12	100	93.694	Otolemur_garnettii
ENSGALG00000003895	PRDM12	83	90.444	ENSPPAG00000031506	-	99	90.444	Pan_paniscus
ENSGALG00000003895	PRDM12	100	82.730	ENSPPRG00000023024	PRDM12	92	82.730	Panthera_pardus
ENSGALG00000003895	PRDM12	94	92.814	ENSPTRG00000043324	-	100	88.525	Pan_troglodytes
ENSGALG00000003895	PRDM12	94	92.814	ENSPTRG00000021475	PRDM12	100	88.525	Pan_troglodytes
ENSGALG00000003895	PRDM12	94	93.114	ENSPANG00000025967	PRDM12	100	89.532	Papio_anubis
ENSGALG00000003895	PRDM12	97	77.684	ENSPKIG00000004305	PRDM12	99	78.063	Paramormyrops_kingsleyae
ENSGALG00000003895	PRDM12	99	84.946	ENSPKIG00000007228	prdm12b	100	85.215	Paramormyrops_kingsleyae
ENSGALG00000003895	PRDM12	100	96.328	ENSPSIG00000006739	PRDM12	100	96.328	Pelodiscus_sinensis
ENSGALG00000003895	PRDM12	100	79.348	ENSPMGG00000008867	prdm12b	100	79.891	Periophthalmus_magnuspinnatus
ENSGALG00000003895	PRDM12	99	75.979	ENSPMGG00000002356	-	100	75.979	Periophthalmus_magnuspinnatus
ENSGALG00000003895	PRDM12	94	93.072	ENSPEMG00000009969	Prdm12	96	89.205	Peromyscus_maniculatus_bairdii
ENSGALG00000003895	PRDM12	100	96.338	ENSPCIG00000024119	PRDM12	100	96.338	Phascolarctos_cinereus
ENSGALG00000003895	PRDM12	99	80.863	ENSPFOG00000019841	prdm12b	100	80.863	Poecilia_formosa
ENSGALG00000003895	PRDM12	100	78.215	ENSPLAG00000016626	prdm12b	100	79.528	Poecilia_latipinna
ENSGALG00000003895	PRDM12	97	77.898	ENSPMEG00000016698	prdm12b	100	78.976	Poecilia_mexicana
ENSGALG00000003895	PRDM12	100	78.010	ENSPREG00000015073	prdm12b	100	79.581	Poecilia_reticulata
ENSGALG00000003895	PRDM12	94	78.488	ENSPREG00000003211	-	94	78.488	Poecilia_reticulata
ENSGALG00000003895	PRDM12	97	91.570	ENSPPYG00000019694	PRDM12	98	91.570	Pongo_abelii
ENSGALG00000003895	PRDM12	94	93.713	ENSPCOG00000022255	PRDM12	100	89.617	Propithecus_coquereli
ENSGALG00000003895	PRDM12	94	93.413	ENSPVAG00000001511	PRDM12	100	89.071	Pteropus_vampyrus
ENSGALG00000003895	PRDM12	99	75.505	ENSPNYG00000013589	-	100	77.020	Pundamilia_nyererei
ENSGALG00000003895	PRDM12	99	78.989	ENSPNYG00000009607	prdm12b	100	78.989	Pundamilia_nyererei
ENSGALG00000003895	PRDM12	99	76.064	ENSPNAG00000013396	PRDM12	100	76.882	Pygocentrus_nattereri
ENSGALG00000003895	PRDM12	99	85.054	ENSPNAG00000024532	prdm12b	100	86.685	Pygocentrus_nattereri
ENSGALG00000003895	PRDM12	94	92.814	ENSRNOG00000009218	Prdm12	100	88.767	Rattus_norvegicus
ENSGALG00000003895	PRDM12	89	93.375	ENSRBIG00000042712	PRDM12	98	86.275	Rhinopithecus_bieti
ENSGALG00000003895	PRDM12	91	93.458	ENSRROG00000043554	PRDM12	100	93.458	Rhinopithecus_roxellana
ENSGALG00000003895	PRDM12	100	95.506	ENSSHAG00000015972	PRDM12	100	95.506	Sarcophilus_harrisii
ENSGALG00000003895	PRDM12	99	75.321	ENSSMAG00000003754	prdm12b	100	75.835	Scophthalmus_maximus
ENSGALG00000003895	PRDM12	99	77.865	ENSSDUG00000023498	prdm12b	100	77.865	Seriola_dumerili
ENSGALG00000003895	PRDM12	96	82.647	ENSSDUG00000019071	-	100	79.474	Seriola_dumerili
ENSGALG00000003895	PRDM12	99	83.662	ENSSLDG00000013562	-	100	83.662	Seriola_lalandi_dorsalis
ENSGALG00000003895	PRDM12	99	77.953	ENSSLDG00000009557	prdm12b	100	77.953	Seriola_lalandi_dorsalis
ENSGALG00000003895	PRDM12	100	96.328	ENSSPUG00000013424	PRDM12	100	96.328	Sphenodon_punctatus
ENSGALG00000003895	PRDM12	99	69.191	ENSSPAG00000022420	-	100	72.087	Stegastes_partitus
ENSGALG00000003895	PRDM12	99	76.903	ENSSPAG00000018824	prdm12b	100	77.953	Stegastes_partitus
ENSGALG00000003895	PRDM12	94	93.713	ENSSSCG00000005703	PRDM12	100	89.835	Sus_scrofa
ENSGALG00000003895	PRDM12	99	79.501	ENSTRUG00000013239	-	100	79.501	Takifugu_rubripes
ENSGALG00000003895	PRDM12	99	79.189	ENSTRUG00000018659	prdm12b	100	79.459	Takifugu_rubripes
ENSGALG00000003895	PRDM12	99	78.378	ENSTNIG00000009020	prdm12b	99	78.649	Tetraodon_nigroviridis
ENSGALG00000003895	PRDM12	99	77.933	ENSTNIG00000005859	-	99	77.933	Tetraodon_nigroviridis
ENSGALG00000003895	PRDM12	94	93.713	ENSUAMG00000009653	PRDM12	94	92.962	Ursus_americanus
ENSGALG00000003895	PRDM12	94	93.675	ENSVVUG00000027662	PRDM12	79	93.675	Vulpes_vulpes
ENSGALG00000003895	PRDM12	100	79.255	ENSXCOG00000002836	prdm12b	100	80.319	Xiphophorus_couchianus
ENSGALG00000003895	PRDM12	99	78.933	ENSXMAG00000005537	prdm12b	100	80.000	Xiphophorus_maculatus
ENSGALG00000003895	PRDM12	99	76.302	ENSXMAG00000028012	-	100	77.083	Xiphophorus_maculatus