EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000004324 (Gene tree)
Gene ID: 416851
Gene Symbol: SETD1B
Alias: SETD1A
Full Name: Gallus gallus SET domain containing 1B (SETD1B)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 40877 bases
Position: chr15:5938524-5979400
Accession: NM_001030661
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000038427	RRM_1	PF00076.22	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000039216	-	6200	-	ENSGALP00000038427	2008 (aa)	-	F1NKV4

Gene Model

Click here to download ENSGALG00000004324's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000004324's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000004324	SETD1B	54	74.090	ENSG00000139718	SETD1B	75	62.682	Homo_sapiens
ENSGALG00000004324	SETD1B	74	62.832	ENSACIG00000016453	setd1ba	70	55.394	Amphilophus_citrinellus
ENSGALG00000004324	SETD1B	83	59.652	ENSAPEG00000010762	setd1ba	70	55.474	Amphiprion_percula
ENSGALG00000004324	SETD1B	68	81.763	ENSATEG00000021563	setd1ba	82	56.394	Anabas_testudineus
ENSGALG00000004324	SETD1B	97	93.778	ENSAPLG00000005217	SETD1B	99	93.862	Anas_platyrhynchos
ENSGALG00000004324	SETD1B	53	73.261	ENSCJAG00000016930	SETD1B	70	62.245	Callithrix_jacchus
ENSGALG00000004324	SETD1B	53	75.000	ENSCAFG00000008167	SETD1B	66	62.969	Canis_familiaris
ENSGALG00000004324	SETD1B	53	78.161	ENSCHIG00000013406	SETD1B	70	63.833	Capra_hircus
ENSGALG00000004324	SETD1B	62	66.292	ENSTSYG00000033777	SETD1B	73	77.091	Carlito_syrichta
ENSGALG00000004324	SETD1B	53	73.913	ENSCCAG00000031928	SETD1B	69	62.391	Cebus_capucinus
ENSGALG00000004324	SETD1B	74	73.448	ENSCATG00000035803	SETD1B	76	63.323	Cercocebus_atys
ENSGALG00000004324	SETD1B	64	78.070	ENSCLAG00000013200	SETD1B	85	77.872	Chinchilla_lanigera
ENSGALG00000004324	SETD1B	77	89.793	ENSCPBG00000026067	SETD1B	78	90.030	Chrysemys_picta_bellii
ENSGALG00000004324	SETD1B	65	75.564	ENSCANG00000023445	SETD1B	73	75.564	Colobus_angolensis_palliatus
ENSGALG00000004324	SETD1B	59	84.772	ENSCGRG00000018075	Setd1b	79	84.772	Cricetulus_griseus_crigri
ENSGALG00000004324	SETD1B	84	56.866	ENSCVAG00000022068	setd1ba	68	55.878	Cyprinodon_variegatus
ENSGALG00000004324	SETD1B	54	74.728	ENSEASG00005012369	SETD1B	71	62.428	Equus_asinus_asinus
ENSGALG00000004324	SETD1B	81	74.000	ENSELUG00000022712	-	60	63.957	Esox_lucius
ENSGALG00000004324	SETD1B	63	89.151	ENSFALG00000009136	SETD1B	64	89.387	Ficedula_albicollis
ENSGALG00000004324	SETD1B	67	78.261	ENSFDAG00000015120	SETD1B	84	78.261	Fukomys_damarensis
ENSGALG00000004324	SETD1B	80	58.294	ENSGACG00000017002	setd1ba	53	66.667	Gasterosteus_aculeatus
ENSGALG00000004324	SETD1B	97	90.680	ENSGAGG00000025013	SETD1B	79	90.923	Gopherus_agassizii
ENSGALG00000004324	SETD1B	64	74.398	ENSHGLG00000012063	SETD1B	69	63.102	Heterocephalus_glaber_female
ENSGALG00000004324	SETD1B	85	55.042	ENSHCOG00000001951	setd1ba	54	78.824	Hippocampus_comes
ENSGALG00000004324	SETD1B	68	53.427	ENSIPUG00000024741	setd1b	68	53.081	Ictalurus_punctatus
ENSGALG00000004324	SETD1B	63	62.312	ENSSTOG00000012430	SETD1B	77	62.245	Ictidomys_tridecemlineatus
ENSGALG00000004324	SETD1B	70	72.340	ENSLBEG00000020113	setd1ba	68	53.880	Labrus_bergylta
ENSGALG00000004324	SETD1B	64	90.615	ENSLAFG00000026518	SETD1B	81	90.615	Loxodonta_africana
ENSGALG00000004324	SETD1B	74	75.385	ENSMFAG00000030930	SETD1B	76	63.418	Macaca_fascicularis
ENSGALG00000004324	SETD1B	53	73.233	ENSMMUG00000012842	SETD1B	75	62.974	Macaca_mulatta
ENSGALG00000004324	SETD1B	54	75.385	ENSMNEG00000014228	SETD1B	70	62.428	Macaca_nemestrina
ENSGALG00000004324	SETD1B	96	97.730	ENSMGAG00000004421	SETD1B	100	97.730	Meleagris_gallopavo
ENSGALG00000004324	SETD1B	55	70.861	ENSMICG00000001575	SETD1A	53	69.968	Microcebus_murinus
ENSGALG00000004324	SETD1B	63	61.826	ENSMICG00000001152	SETD1B	70	62.245	Microcebus_murinus
ENSGALG00000004324	SETD1B	86	56.084	ENSMMOG00000008190	setd1ba	67	55.294	Mola_mola
ENSGALG00000004324	SETD1B	87	58.144	ENSNBRG00000002915	setd1ba	51	68.571	Neolamprologus_brichardi
ENSGALG00000004324	SETD1B	67	73.523	ENSODEG00000010155	SETD1B	64	62.819	Octodon_degus
ENSGALG00000004324	SETD1B	86	57.860	ENSONIG00000013898	setd1ba	53	81.763	Oreochromis_niloticus
ENSGALG00000004324	SETD1B	67	76.063	ENSOCUG00000017708	SETD1B	69	61.360	Oryctolagus_cuniculus
ENSGALG00000004324	SETD1B	82	58.372	ENSORLG00000008435	setd1ba	72	74.271	Oryzias_latipes
ENSGALG00000004324	SETD1B	82	58.232	ENSORLG00020017079	setd1ba	68	83.601	Oryzias_latipes_hni
ENSGALG00000004324	SETD1B	52	56.215	ENSORLG00015004156	setd1ba	52	55.669	Oryzias_latipes_hsok
ENSGALG00000004324	SETD1B	71	73.936	ENSOMEG00000002270	setd1ba	69	58.642	Oryzias_melastigma
ENSGALG00000004324	SETD1B	63	62.669	ENSOGAG00000034809	SETD1B	67	62.225	Otolemur_garnettii
ENSGALG00000004324	SETD1B	53	74.672	ENSOARG00000012777	SETD1B	65	63.333	Ovis_aries
ENSGALG00000004324	SETD1B	69	84.167	ENSPPRG00000021041	SETD1B	81	84.298	Panthera_pardus
ENSGALG00000004324	SETD1B	54	74.090	ENSPANG00000014784	SETD1B	73	62.355	Papio_anubis
ENSGALG00000004324	SETD1B	65	84.281	ENSPSIG00000015966	-	68	84.488	Pelodiscus_sinensis
ENSGALG00000004324	SETD1B	82	55.281	ENSPMGG00000011527	setd1ba	73	72.468	Periophthalmus_magnuspinnatus
ENSGALG00000004324	SETD1B	63	62.048	ENSPCOG00000003246	SETD1B	69	62.482	Propithecus_coquereli
ENSGALG00000004324	SETD1B	55	71.192	ENSPCOG00000020896	SETD1A	53	70.288	Propithecus_coquereli
ENSGALG00000004324	SETD1B	62	73.913	ENSSBOG00000033322	SETD1B	92	74.113	Saimiri_boliviensis_boliviensis
ENSGALG00000004324	SETD1B	55	69.024	ENSSBOG00000020392	SETD1A	53	68.051	Saimiri_boliviensis_boliviensis
ENSGALG00000004324	SETD1B	58	86.379	ENSSFOG00015004814	SETD1B	88	65.526	Scleropages_formosus
ENSGALG00000004324	SETD1B	83	59.027	ENSSMAG00000001244	setd1ba	55	71.611	Scophthalmus_maximus
ENSGALG00000004324	SETD1B	83	61.173	ENSSDUG00000018313	setd1ba	56	76.064	Seriola_dumerili
ENSGALG00000004324	SETD1B	53	77.701	ENSSSCG00000009806	SETD1B	69	65.306	Sus_scrofa
ENSGALG00000004324	SETD1B	63	90.945	ENSTGUG00000006093	-	64	90.157	Taeniopygia_guttata
ENSGALG00000004324	SETD1B	66	81.481	ENSTRUG00000009533	setd1ba	72	81.481	Takifugu_rubripes
ENSGALG00000004324	SETD1B	86	57.500	ENSTNIG00000009090	setd1ba	55	72.895	Tetraodon_nigroviridis
ENSGALG00000004324	SETD1B	50	73.420	ENSUAMG00000008729	SETD1B	68	59.835	Ursus_americanus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005694	chromosome	-	IEA	Component
GO:0016607	nuclear speck	-	IEA	Component
GO:0018024	histone-lysine N-methyltransferase activity	-	IEA	Function
GO:0048188	Set1C/COMPASS complex	-	IEA	Component
GO:0051568	histone H3-K4 methylation	-	IEA	Process