EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000004325 (Gene tree)
Gene ID: 423704
Gene Symbol: P4HA1
Alias: -
Full Name: Gallus gallus prolyl 4-hydroxylase subunit alpha 1 (P4HA1)%2C transcript variant 2%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 30634 bases
Position: chr6:11904936-11935569
Accession: NM_001198736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000047674	2OG-FeII_Oxy	PF03171.20	1.8e-08	1	1
ENSGALP00000064349	2OG-FeII_Oxy	PF03171.20	1.9e-08	1	1
ENSGALP00000006885	2OG-FeII_Oxy	PF03171.20	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000058801	-	5161	-	ENSGALP00000047674	536 (aa)	-	A0A1D5P4R2
ENSGALT00000006896	-	5161	-	ENSGALP00000006885	536 (aa)	-	E1BY52
ENSGALT00000083944	-	2517	-	ENSGALP00000064349	531 (aa)	-	A0A1L1RZR1

Gene Model

Click here to download ENSGALG00000004325's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga00330	Arginine and proline metabolism	KEGG
gga01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000004325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000004325	P4HA1	100	86.916	ENSG00000122884	P4HA1	99	87.103	Homo_sapiens
ENSGALG00000004325	P4HA1	97	76.128	ENSAPOG00000005170	p4ha1b	99	75.461	Acanthochromis_polyacanthus
ENSGALG00000004325	P4HA1	99	86.355	ENSAMEG00000017009	P4HA1	99	86.355	Ailuropoda_melanoleuca
ENSGALG00000004325	P4HA1	96	76.744	ENSACIG00000007255	p4ha1b	99	75.706	Amphilophus_citrinellus
ENSGALG00000004325	P4HA1	97	77.186	ENSAOCG00000001647	p4ha1b	98	75.741	Amphiprion_ocellaris
ENSGALG00000004325	P4HA1	99	63.842	ENSAPEG00000010402	-	99	63.842	Amphiprion_percula
ENSGALG00000004325	P4HA1	97	77.186	ENSAPEG00000005243	p4ha1b	98	75.741	Amphiprion_percula
ENSGALG00000004325	P4HA1	97	77.143	ENSATEG00000009272	p4ha1b	96	77.714	Anabas_testudineus
ENSGALG00000004325	P4HA1	97	98.839	ENSAPLG00000009284	P4HA1	100	98.839	Anas_platyrhynchos
ENSGALG00000004325	P4HA1	100	89.114	ENSACAG00000000564	P4HA1	100	89.114	Anolis_carolinensis
ENSGALG00000004325	P4HA1	100	86.916	ENSANAG00000024545	P4HA1	99	88.742	Aotus_nancymaae
ENSGALG00000004325	P4HA1	96	75.000	ENSACLG00000021556	p4ha1b	96	76.236	Astatotilapia_calliptera
ENSGALG00000004325	P4HA1	99	74.393	ENSAMXG00000011123	p4ha1b	99	74.579	Astyanax_mexicanus
ENSGALG00000004325	P4HA1	100	86.916	ENSBTAG00000032996	P4HA1	99	87.103	Bos_taurus
ENSGALG00000004325	P4HA1	100	86.916	ENSCJAG00000007429	P4HA1	98	89.879	Callithrix_jacchus
ENSGALG00000004325	P4HA1	100	87.103	ENSCAFG00000014573	P4HA1	99	87.290	Canis_familiaris
ENSGALG00000004325	P4HA1	99	86.090	ENSCAFG00020023993	P4HA1	98	87.647	Canis_lupus_dingo
ENSGALG00000004325	P4HA1	99	87.242	ENSCHIG00000013957	P4HA1	99	87.242	Capra_hircus
ENSGALG00000004325	P4HA1	100	86.168	ENSTSYG00000004004	P4HA1	100	90.984	Carlito_syrichta
ENSGALG00000004325	P4HA1	100	85.607	ENSCPOG00000015701	P4HA1	99	87.748	Cavia_porcellus
ENSGALG00000004325	P4HA1	100	86.916	ENSCATG00000029618	P4HA1	99	88.742	Cercocebus_atys
ENSGALG00000004325	P4HA1	100	85.794	ENSCLAG00000017260	P4HA1	99	88.079	Chinchilla_lanigera
ENSGALG00000004325	P4HA1	100	86.916	ENSCSAG00000008626	P4HA1	99	87.103	Chlorocebus_sabaeus
ENSGALG00000004325	P4HA1	100	91.963	ENSCPBG00000007933	P4HA1	100	91.852	Chrysemys_picta_bellii
ENSGALG00000004325	P4HA1	100	86.729	ENSCANG00000033147	P4HA1	99	88.742	Colobus_angolensis_palliatus
ENSGALG00000004325	P4HA1	100	85.794	ENSCGRG00001007006	P4ha1	99	87.748	Cricetulus_griseus_chok1gshd
ENSGALG00000004325	P4HA1	100	85.794	ENSCGRG00000009371	P4ha1	99	87.748	Cricetulus_griseus_crigri
ENSGALG00000004325	P4HA1	99	73.792	ENSCSEG00000004939	p4ha1b	99	73.792	Cynoglossus_semilaevis
ENSGALG00000004325	P4HA1	99	74.860	ENSCVAG00000016433	p4ha1b	98	75.233	Cyprinodon_variegatus
ENSGALG00000004325	P4HA1	98	39.382	ENSDARG00000017038	zgc:152670	95	54.274	Danio_rerio
ENSGALG00000004325	P4HA1	97	75.670	ENSDARG00000071082	p4ha1b	99	75.472	Danio_rerio
ENSGALG00000004325	P4HA1	99	85.526	ENSDNOG00000013665	P4HA1	94	85.714	Dasypus_novemcinctus
ENSGALG00000004325	P4HA1	100	87.103	ENSDORG00000003405	P4ha1	99	88.411	Dipodomys_ordii
ENSGALG00000004325	P4HA1	99	61.236	ENSEBUG00000005379	p4ha1b	99	61.236	Eptatretus_burgeri
ENSGALG00000004325	P4HA1	99	85.066	ENSEASG00005016606	P4HA1	99	88.742	Equus_asinus_asinus
ENSGALG00000004325	P4HA1	97	87.283	ENSECAG00000012496	P4HA1	100	87.476	Equus_caballus
ENSGALG00000004325	P4HA1	85	81.699	ENSEEUG00000005542	P4HA1	85	81.699	Erinaceus_europaeus
ENSGALG00000004325	P4HA1	98	73.284	ENSELUG00000005913	p4ha1b	99	74.419	Esox_lucius
ENSGALG00000004325	P4HA1	100	86.729	ENSFCAG00000018673	P4HA1	99	86.916	Felis_catus
ENSGALG00000004325	P4HA1	100	97.552	ENSFALG00000012773	P4HA1	100	97.015	Ficedula_albicollis
ENSGALG00000004325	P4HA1	100	78.131	ENSFDAG00000007094	P4HA1	99	78.318	Fukomys_damarensis
ENSGALG00000004325	P4HA1	97	74.906	ENSFHEG00000022856	p4ha1b	98	76.059	Fundulus_heteroclitus
ENSGALG00000004325	P4HA1	94	71.456	ENSGMOG00000018948	p4ha1b	99	71.456	Gadus_morhua
ENSGALG00000004325	P4HA1	97	75.810	ENSGAFG00000019818	p4ha1b	98	75.325	Gambusia_affinis
ENSGALG00000004325	P4HA1	96	74.296	ENSGACG00000010233	p4ha1b	97	75.522	Gasterosteus_aculeatus
ENSGALG00000004325	P4HA1	100	86.916	ENSGGOG00000015551	P4HA1	99	88.742	Gorilla_gorilla
ENSGALG00000004325	P4HA1	96	75.000	ENSHBUG00000015524	p4ha1b	96	76.236	Haplochromis_burtoni
ENSGALG00000004325	P4HA1	100	85.981	ENSHGLG00000011764	P4HA1	99	88.411	Heterocephalus_glaber_female
ENSGALG00000004325	P4HA1	95	76.848	ENSHCOG00000017152	p4ha1b	99	77.237	Hippocampus_comes
ENSGALG00000004325	P4HA1	97	74.759	ENSIPUG00000015157	P4HA1	99	74.102	Ictalurus_punctatus
ENSGALG00000004325	P4HA1	100	86.542	ENSSTOG00000027062	P4HA1	99	88.742	Ictidomys_tridecemlineatus
ENSGALG00000004325	P4HA1	99	85.366	ENSJJAG00000004232	P4ha1	99	87.086	Jaculus_jaculus
ENSGALG00000004325	P4HA1	97	74.906	ENSKMAG00000001588	p4ha1b	99	74.539	Kryptolebias_marmoratus
ENSGALG00000004325	P4HA1	97	75.573	ENSLBEG00000018911	p4ha1b	98	74.860	Labrus_bergylta
ENSGALG00000004325	P4HA1	97	83.556	ENSLACG00000010202	P4HA1	100	81.111	Latimeria_chalumnae
ENSGALG00000004325	P4HA1	99	80.337	ENSLOCG00000008546	p4ha1b	98	80.337	Lepisosteus_oculatus
ENSGALG00000004325	P4HA1	100	86.168	ENSLAFG00000002652	P4HA1	99	86.355	Loxodonta_africana
ENSGALG00000004325	P4HA1	100	86.916	ENSMFAG00000030507	P4HA1	99	88.742	Macaca_fascicularis
ENSGALG00000004325	P4HA1	100	83.738	ENSMMUG00000011274	P4HA1	99	88.742	Macaca_mulatta
ENSGALG00000004325	P4HA1	99	84.831	ENSMNEG00000011433	P4HA1	98	86.523	Macaca_nemestrina
ENSGALG00000004325	P4HA1	96	81.445	ENSMLEG00000043338	P4HA1	100	93.443	Mandrillus_leucophaeus
ENSGALG00000004325	P4HA1	97	74.427	ENSMAMG00000015854	p4ha1b	99	74.164	Mastacembelus_armatus
ENSGALG00000004325	P4HA1	96	74.812	ENSMZEG00005027421	p4ha1b	96	76.046	Maylandia_zebra
ENSGALG00000004325	P4HA1	100	99.250	ENSMGAG00000005554	P4HA1	100	99.806	Meleagris_gallopavo
ENSGALG00000004325	P4HA1	100	70.467	ENSMAUG00000011056	P4ha1	96	80.464	Mesocricetus_auratus
ENSGALG00000004325	P4HA1	100	86.729	ENSMICG00000031365	P4HA1	99	88.742	Microcebus_murinus
ENSGALG00000004325	P4HA1	100	85.421	ENSMOCG00000017531	P4ha1	99	87.086	Microtus_ochrogaster
ENSGALG00000004325	P4HA1	96	76.560	ENSMMOG00000008022	p4ha1b	99	76.164	Mola_mola
ENSGALG00000004325	P4HA1	99	87.970	ENSMODG00000000121	P4HA1	100	86.691	Monodelphis_domestica
ENSGALG00000004325	P4HA1	96	76.083	ENSMALG00000019674	p4ha1b	98	76.340	Monopterus_albus
ENSGALG00000004325	P4HA1	100	85.234	MGP_CAROLIEiJ_G0015342	P4ha1	99	88.411	Mus_caroli
ENSGALG00000004325	P4HA1	100	85.047	ENSMUSG00000019916	P4ha1	99	88.079	Mus_musculus
ENSGALG00000004325	P4HA1	100	85.607	MGP_PahariEiJ_G0030758	P4ha1	99	88.411	Mus_pahari
ENSGALG00000004325	P4HA1	100	85.047	MGP_SPRETEiJ_G0016153	P4ha1	99	88.079	Mus_spretus
ENSGALG00000004325	P4HA1	100	86.729	ENSMPUG00000003940	P4HA1	99	86.916	Mustela_putorius_furo
ENSGALG00000004325	P4HA1	99	86.867	ENSMLUG00000006548	P4HA1	99	86.867	Myotis_lucifugus
ENSGALG00000004325	P4HA1	100	85.981	ENSNGAG00000014487	P4ha1	99	88.079	Nannospalax_galili
ENSGALG00000004325	P4HA1	96	76.744	ENSNBRG00000014791	p4ha1b	97	77.369	Neolamprologus_brichardi
ENSGALG00000004325	P4HA1	100	76.449	ENSNLEG00000035416	P4HA1	99	90.871	Nomascus_leucogenys
ENSGALG00000004325	P4HA1	91	79.508	ENSMEUG00000010326	P4HA1	95	79.713	Notamacropus_eugenii
ENSGALG00000004325	P4HA1	100	76.262	ENSOPRG00000000990	P4HA1	99	76.262	Ochotona_princeps
ENSGALG00000004325	P4HA1	86	87.748	ENSODEG00000015164	P4HA1	99	88.079	Octodon_degus
ENSGALG00000004325	P4HA1	96	75.281	ENSONIG00000000737	p4ha1b	88	75.231	Oreochromis_niloticus
ENSGALG00000004325	P4HA1	80	89.044	ENSOANG00000001125	-	100	89.277	Ornithorhynchus_anatinus
ENSGALG00000004325	P4HA1	99	86.168	ENSOCUG00000009739	P4HA1	99	86.168	Oryctolagus_cuniculus
ENSGALG00000004325	P4HA1	97	74.763	ENSORLG00000005147	p4ha1b	100	75.000	Oryzias_latipes
ENSGALG00000004325	P4HA1	97	74.763	ENSORLG00020010911	p4ha1b	98	73.937	Oryzias_latipes_hni
ENSGALG00000004325	P4HA1	91	74.380	ENSORLG00015016175	p4ha1b	99	74.639	Oryzias_latipes_hsok
ENSGALG00000004325	P4HA1	97	75.094	ENSOMEG00000009962	p4ha1b	99	74.815	Oryzias_melastigma
ENSGALG00000004325	P4HA1	99	86.034	ENSOGAG00000003483	P4HA1	99	86.034	Otolemur_garnettii
ENSGALG00000004325	P4HA1	99	87.242	ENSOARG00000007348	P4HA1	99	87.242	Ovis_aries
ENSGALG00000004325	P4HA1	100	80.627	ENSPPAG00000030135	P4HA1	100	93.443	Pan_paniscus
ENSGALG00000004325	P4HA1	100	86.729	ENSPPRG00000002655	P4HA1	99	86.916	Panthera_pardus
ENSGALG00000004325	P4HA1	100	86.729	ENSPTIG00000007711	P4HA1	99	86.916	Panthera_tigris_altaica
ENSGALG00000004325	P4HA1	100	82.243	ENSPTRG00000002619	P4HA1	99	86.093	Pan_troglodytes
ENSGALG00000004325	P4HA1	100	86.916	ENSPANG00000022355	P4HA1	99	88.742	Papio_anubis
ENSGALG00000004325	P4HA1	99	75.752	ENSPKIG00000000438	p4ha1b	99	75.752	Paramormyrops_kingsleyae
ENSGALG00000004325	P4HA1	100	90.741	ENSPSIG00000016298	P4HA1	100	91.199	Pelodiscus_sinensis
ENSGALG00000004325	P4HA1	95	76.908	ENSPMGG00000007593	p4ha1b	98	75.382	Periophthalmus_magnuspinnatus
ENSGALG00000004325	P4HA1	100	85.421	ENSPEMG00000006561	P4ha1	99	87.086	Peromyscus_maniculatus_bairdii
ENSGALG00000004325	P4HA1	100	87.313	ENSPCIG00000018768	P4HA1	100	87.313	Phascolarctos_cinereus
ENSGALG00000004325	P4HA1	96	75.518	ENSPFOG00000018574	p4ha1b	98	75.139	Poecilia_formosa
ENSGALG00000004325	P4HA1	97	75.518	ENSPLAG00000012628	p4ha1b	99	75.244	Poecilia_latipinna
ENSGALG00000004325	P4HA1	97	75.141	ENSPMEG00000024082	p4ha1b	98	74.954	Poecilia_mexicana
ENSGALG00000004325	P4HA1	97	76.083	ENSPREG00000010003	p4ha1b	98	75.881	Poecilia_reticulata
ENSGALG00000004325	P4HA1	100	86.916	ENSPPYG00000002348	P4HA1	99	87.103	Pongo_abelii
ENSGALG00000004325	P4HA1	95	78.824	ENSPCOG00000017553	P4HA1	100	93.852	Propithecus_coquereli
ENSGALG00000004325	P4HA1	100	77.009	ENSPVAG00000012989	P4HA1	100	77.196	Pteropus_vampyrus
ENSGALG00000004325	P4HA1	96	75.188	ENSPNYG00000002443	p4ha1b	98	75.139	Pundamilia_nyererei
ENSGALG00000004325	P4HA1	99	75.419	ENSPNAG00000023149	p4ha1b	99	75.419	Pygocentrus_nattereri
ENSGALG00000004325	P4HA1	100	85.234	ENSRNOG00000050655	P4ha1	99	85.421	Rattus_norvegicus
ENSGALG00000004325	P4HA1	100	76.449	ENSRBIG00000035304	P4HA1	99	76.636	Rhinopithecus_bieti
ENSGALG00000004325	P4HA1	100	86.916	ENSRROG00000044078	P4HA1	99	88.742	Rhinopithecus_roxellana
ENSGALG00000004325	P4HA1	71	86.528	ENSSHAG00000008056	P4HA1	100	87.047	Sarcophilus_harrisii
ENSGALG00000004325	P4HA1	100	75.970	ENSSFOG00015009176	p4ha1b	100	77.451	Scleropages_formosus
ENSGALG00000004325	P4HA1	98	74.627	ENSSMAG00000019199	p4ha1b	98	76.226	Scophthalmus_maximus
ENSGALG00000004325	P4HA1	96	76.271	ENSSDUG00000016587	p4ha1b	98	75.696	Seriola_dumerili
ENSGALG00000004325	P4HA1	97	76.083	ENSSLDG00000016261	p4ha1b	98	75.696	Seriola_lalandi_dorsalis
ENSGALG00000004325	P4HA1	99	82.430	ENSSARG00000003275	P4HA1	99	82.430	Sorex_araneus
ENSGALG00000004325	P4HA1	100	90.185	ENSSPUG00000002624	P4HA1	100	90.185	Sphenodon_punctatus
ENSGALG00000004325	P4HA1	86	74.895	ENSSPAG00000011193	p4ha1b	100	74.895	Stegastes_partitus
ENSGALG00000004325	P4HA1	100	86.542	ENSSSCG00000010292	P4HA1	99	86.729	Sus_scrofa
ENSGALG00000004325	P4HA1	100	96.798	ENSTGUG00000004364	-	100	96.617	Taeniopygia_guttata
ENSGALG00000004325	P4HA1	99	74.265	ENSTRUG00000004081	p4ha1b	99	74.909	Takifugu_rubripes
ENSGALG00000004325	P4HA1	99	76.415	ENSTNIG00000017021	p4ha1b	99	76.306	Tetraodon_nigroviridis
ENSGALG00000004325	P4HA1	100	85.421	ENSTTRG00000009782	P4HA1	99	85.607	Tursiops_truncatus
ENSGALG00000004325	P4HA1	100	86.542	ENSUMAG00000009024	P4HA1	99	86.729	Ursus_maritimus
ENSGALG00000004325	P4HA1	99	76.836	ENSVPAG00000007253	P4HA1	99	77.024	Vicugna_pacos
ENSGALG00000004325	P4HA1	100	87.103	ENSVVUG00000022660	P4HA1	99	87.290	Vulpes_vulpes
ENSGALG00000004325	P4HA1	99	78.172	ENSXETG00000006154	p4ha1	99	78.771	Xenopus_tropicalis
ENSGALG00000004325	P4HA1	97	75.665	ENSXCOG00000010262	p4ha1b	99	75.370	Xiphophorus_couchianus
ENSGALG00000004325	P4HA1	97	76.864	ENSXMAG00000003889	p4ha1b	98	75.791	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004656	procollagen-proline 4-dioxygenase activity	21873635.	IBA	Function
GO:0005506	iron ion binding	-	IEA	Function
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0005788	endoplasmic reticulum lumen	-	IEA	Component
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	-	IEA	Function
GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	21873635.	IBA	Process
GO:0031418	L-ascorbic acid binding	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process