EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000004394 (Gene tree)
Gene ID: 100858906
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 18013 bases
Position: chr7:6712367-6730379
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000006993	KH_1	PF00013.29	7.5e-51	1	3
ENSGALP00000006993	KH_1	PF00013.29	7.5e-51	2	3
ENSGALP00000006993	KH_1	PF00013.29	7.5e-51	3	3
ENSGALP00000071768	KH_1	PF00013.29	5.3e-28	1	2
ENSGALP00000071768	KH_1	PF00013.29	5.3e-28	2	2
ENSGALP00000072292	KH_1	PF00013.29	1.1e-19	1	1
ENSGALP00000006993	KH_2	PF07650.17	1.7e-13	1	1
ENSGALP00000072292	KH_2	PF07650.17	1.3e-06	1	1
ENSGALP00000071768	KH_2	PF07650.17	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000098130	-	1460	-	ENSGALP00000072292	163 (aa)	-	-
ENSGALT00000100323	-	1688	-	ENSGALP00000071768	187 (aa)	-	-
ENSGALT00000007004	-	1080	-	ENSGALP00000006993	359 (aa)	-	E1BVU6

Gene Model

Click here to download ENSGALG00000004394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000004394's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000004394	-	98	89.674	ENSAPOG00000016582	-	98	84.507	Acanthochromis_polyacanthus
ENSGALG00000004394	-	98	89.130	ENSAPOG00000020003	pcbp3	87	80.791	Acanthochromis_polyacanthus
ENSGALG00000004394	-	99	91.892	ENSAMEG00000001697	-	100	83.558	Ailuropoda_melanoleuca
ENSGALG00000004394	-	96	88.406	ENSACIG00000010933	pcbp3	93	88.406	Amphilophus_citrinellus
ENSGALG00000004394	-	99	85.070	ENSACIG00000002739	-	98	85.070	Amphilophus_citrinellus
ENSGALG00000004394	-	98	89.130	ENSAOCG00000008592	-	89	89.130	Amphiprion_ocellaris
ENSGALG00000004394	-	98	89.674	ENSAOCG00000007806	-	100	85.139	Amphiprion_ocellaris
ENSGALG00000004394	-	98	89.674	ENSAPEG00000005209	-	98	84.225	Amphiprion_percula
ENSGALG00000004394	-	96	88.184	ENSAPEG00000008011	pcbp3	93	88.184	Amphiprion_percula
ENSGALG00000004394	-	98	89.674	ENSATEG00000009833	-	98	84.225	Anabas_testudineus
ENSGALG00000004394	-	96	88.663	ENSATEG00000015787	-	98	88.663	Anabas_testudineus
ENSGALG00000004394	-	98	92.935	ENSAPLG00000002975	-	100	87.328	Anas_platyrhynchos
ENSGALG00000004394	-	100	78.095	ENSAPLG00000008951	-	80	76.330	Anas_platyrhynchos
ENSGALG00000004394	-	100	93.370	ENSACAG00000004607	-	100	93.370	Anolis_carolinensis
ENSGALG00000004394	-	99	82.500	ENSACAG00000009819	-	99	82.500	Anolis_carolinensis
ENSGALG00000004394	-	87	89.437	ENSANAG00000030702	-	100	98.214	Aotus_nancymaae
ENSGALG00000004394	-	96	87.896	ENSACLG00000011835	pcbp3	93	87.896	Astatotilapia_calliptera
ENSGALG00000004394	-	98	88.587	ENSACLG00000003801	-	98	83.099	Astatotilapia_calliptera
ENSGALG00000004394	-	89	74.157	ENSAMXG00000001760	zgc:110045	73	63.243	Astyanax_mexicanus
ENSGALG00000004394	-	98	88.043	ENSAMXG00000013588	-	98	81.341	Astyanax_mexicanus
ENSGALG00000004394	-	96	89.337	ENSAMXG00000003440	pcbp3	93	89.337	Astyanax_mexicanus
ENSGALG00000004394	-	99	91.892	ENSCAFG00020019472	-	89	91.892	Canis_lupus_dingo
ENSGALG00000004394	-	99	91.892	ENSCSAG00000007440	-	91	84.530	Chlorocebus_sabaeus
ENSGALG00000004394	-	100	91.160	ENSCPBG00000012151	-	100	91.160	Chrysemys_picta_bellii
ENSGALG00000004394	-	97	86.047	ENSCPBG00000000733	-	69	86.047	Chrysemys_picta_bellii
ENSGALG00000004394	-	99	87.027	ENSCSEG00000016984	-	98	73.407	Cynoglossus_semilaevis
ENSGALG00000004394	-	98	86.957	ENSCSEG00000000822	pcbp3	93	86.344	Cynoglossus_semilaevis
ENSGALG00000004394	-	98	89.130	ENSCVAG00000005262	-	99	83.565	Cyprinodon_variegatus
ENSGALG00000004394	-	96	88.439	ENSCVAG00000014482	pcbp3	93	88.439	Cyprinodon_variegatus
ENSGALG00000004394	-	99	89.751	ENSDARG00000054378	pcbp3	99	89.751	Danio_rerio
ENSGALG00000004394	-	87	89.437	ENSETEG00000015988	-	100	74.586	Echinops_telfairi
ENSGALG00000004394	-	91	74.854	ENSEBUG00000005495	pcbp3	67	65.992	Eptatretus_burgeri
ENSGALG00000004394	-	100	81.675	ENSEBUG00000007485	-	92	72.314	Eptatretus_burgeri
ENSGALG00000004394	-	89	75.595	ENSEBUG00000016192	pcbp3	99	65.161	Eptatretus_burgeri
ENSGALG00000004394	-	98	89.674	ENSELUG00000003521	pcbp3	93	88.728	Esox_lucius
ENSGALG00000004394	-	98	90.217	ENSELUG00000001560	-	97	85.070	Esox_lucius
ENSGALG00000004394	-	100	77.619	ENSFALG00000004411	-	75	76.330	Ficedula_albicollis
ENSGALG00000004394	-	98	92.935	ENSFALG00000003949	-	100	85.873	Ficedula_albicollis
ENSGALG00000004394	-	98	89.130	ENSFHEG00000016615	pcbp3	94	82.370	Fundulus_heteroclitus
ENSGALG00000004394	-	98	89.674	ENSFHEG00000006539	-	99	83.844	Fundulus_heteroclitus
ENSGALG00000004394	-	98	76.630	ENSGMOG00000011992	pcbp3	95	73.429	Gadus_morhua
ENSGALG00000004394	-	96	66.571	ENSGMOG00000008611	-	99	66.571	Gadus_morhua
ENSGALG00000004394	-	99	81.337	ENSGALG00000013155	-	99	82.286	Gallus_gallus
ENSGALG00000004394	-	98	89.674	ENSGAFG00000010274	-	93	82.709	Gambusia_affinis
ENSGALG00000004394	-	97	85.960	ENSGAFG00000011430	pcbp3	95	85.960	Gambusia_affinis
ENSGALG00000004394	-	99	78.652	ENSGACG00000014955	-	98	78.652	Gasterosteus_aculeatus
ENSGALG00000004394	-	98	89.674	ENSGACG00000002266	-	98	82.730	Gasterosteus_aculeatus
ENSGALG00000004394	-	91	93.529	ENSGAGG00000000271	-	87	93.529	Gopherus_agassizii
ENSGALG00000004394	-	81	99.338	ENSGAGG00000006956	-	95	86.498	Gopherus_agassizii
ENSGALG00000004394	-	98	88.587	ENSHBUG00000021782	-	98	83.099	Haplochromis_burtoni
ENSGALG00000004394	-	98	88.587	ENSHBUG00000010697	pcbp3	93	88.150	Haplochromis_burtoni
ENSGALG00000004394	-	96	88.439	ENSHCOG00000017868	pcbp3	93	88.439	Hippocampus_comes
ENSGALG00000004394	-	94	87.429	ENSHCOG00000006067	-	98	80.337	Hippocampus_comes
ENSGALG00000004394	-	99	89.751	ENSIPUG00000006238	pcbp3	99	89.751	Ictalurus_punctatus
ENSGALG00000004394	-	98	89.130	ENSKMAG00000018530	-	98	81.180	Kryptolebias_marmoratus
ENSGALG00000004394	-	96	88.184	ENSKMAG00000003046	pcbp3	93	88.184	Kryptolebias_marmoratus
ENSGALG00000004394	-	99	74.011	ENSLBEG00000006542	-	98	75.424	Labrus_bergylta
ENSGALG00000004394	-	98	89.130	ENSLBEG00000006201	pcbp3	96	81.250	Labrus_bergylta
ENSGALG00000004394	-	100	77.251	ENSLACG00000010804	zgc:110045	74	76.139	Latimeria_chalumnae
ENSGALG00000004394	-	97	85.067	ENSLACG00000010386	pcbp3	75	85.067	Latimeria_chalumnae
ENSGALG00000004394	-	97	81.143	ENSLOCG00000005058	zgc:110045	81	81.143	Lepisosteus_oculatus
ENSGALG00000004394	-	100	90.055	ENSLOCG00000009369	pcbp3	100	90.055	Lepisosteus_oculatus
ENSGALG00000004394	-	98	89.130	ENSMAMG00000022336	pcbp3	91	82.507	Mastacembelus_armatus
ENSGALG00000004394	-	98	89.130	ENSMAMG00000011620	-	98	83.944	Mastacembelus_armatus
ENSGALG00000004394	-	99	82.584	ENSMZEG00005014882	-	98	82.730	Maylandia_zebra
ENSGALG00000004394	-	96	87.896	ENSMZEG00005008993	pcbp3	96	88.372	Maylandia_zebra
ENSGALG00000004394	-	97	80.501	ENSMGAG00000001883	-	97	80.501	Meleagris_gallopavo
ENSGALG00000004394	-	97	76.596	ENSMGAG00000006794	-	75	76.596	Meleagris_gallopavo
ENSGALG00000004394	-	98	89.130	ENSMMOG00000000730	pcbp3	86	80.692	Mola_mola
ENSGALG00000004394	-	98	89.130	ENSMMOG00000005216	-	98	82.817	Mola_mola
ENSGALG00000004394	-	75	98.598	ENSMODG00000027884	-	93	98.598	Monodelphis_domestica
ENSGALG00000004394	-	95	88.630	ENSMALG00000000691	pcbp3	93	88.630	Monopterus_albus
ENSGALG00000004394	-	98	90.164	ENSMPUG00000001779	-	92	83.844	Mustela_putorius_furo
ENSGALG00000004394	-	96	88.372	ENSNBRG00000016409	-	93	88.372	Neolamprologus_brichardi
ENSGALG00000004394	-	99	81.564	ENSNBRG00000016714	-	99	82.271	Neolamprologus_brichardi
ENSGALG00000004394	-	97	95.677	ENSOPRG00000003431	-	100	95.677	Ochotona_princeps
ENSGALG00000004394	-	98	88.587	ENSONIG00000004611	-	98	85.833	Oreochromis_niloticus
ENSGALG00000004394	-	96	89.565	ENSONIG00000012122	-	96	89.565	Oreochromis_niloticus
ENSGALG00000004394	-	99	91.351	ENSOCUG00000002696	-	91	84.765	Oryctolagus_cuniculus
ENSGALG00000004394	-	98	89.130	ENSORLG00000000059	pcbp3	98	82.081	Oryzias_latipes
ENSGALG00000004394	-	98	89.674	ENSORLG00000022739	-	98	83.193	Oryzias_latipes
ENSGALG00000004394	-	98	89.130	ENSORLG00020012671	pcbp3	97	81.127	Oryzias_latipes_hni
ENSGALG00000004394	-	98	89.130	ENSORLG00020006124	-	98	83.099	Oryzias_latipes_hni
ENSGALG00000004394	-	98	89.130	ENSORLG00015000429	pcbp3	97	81.127	Oryzias_latipes_hsok
ENSGALG00000004394	-	98	89.674	ENSORLG00015008051	-	95	81.921	Oryzias_latipes_hsok
ENSGALG00000004394	-	98	89.130	ENSOMEG00000020811	pcbp3	98	81.515	Oryzias_melastigma
ENSGALG00000004394	-	98	89.130	ENSOMEG00000020162	-	98	83.099	Oryzias_melastigma
ENSGALG00000004394	-	100	85.405	ENSOGAG00000008044	-	100	85.405	Otolemur_garnettii
ENSGALG00000004394	-	95	82.222	ENSPKIG00000020913	-	93	80.282	Paramormyrops_kingsleyae
ENSGALG00000004394	-	98	90.761	ENSPKIG00000019329	pcbp3	98	83.944	Paramormyrops_kingsleyae
ENSGALG00000004394	-	100	76.776	ENSPSIG00000014970	-	100	77.322	Pelodiscus_sinensis
ENSGALG00000004394	-	74	81.887	ENSPSIG00000008350	-	68	81.887	Pelodiscus_sinensis
ENSGALG00000004394	-	95	88.406	ENSPMGG00000022383	pcbp3	93	88.406	Periophthalmus_magnuspinnatus
ENSGALG00000004394	-	83	89.032	ENSPMAG00000004637	-	100	89.032	Petromyzon_marinus
ENSGALG00000004394	-	98	73.118	ENSPMAG00000004551	pcbp3	91	64.045	Petromyzon_marinus
ENSGALG00000004394	-	100	99.465	ENSPCIG00000028092	-	94	99.465	Phascolarctos_cinereus
ENSGALG00000004394	-	91	95.882	ENSPLAG00000004074	-	91	84.746	Poecilia_latipinna
ENSGALG00000004394	-	97	87.931	ENSPLAG00000011449	pcbp3	87	87.931	Poecilia_latipinna
ENSGALG00000004394	-	100	85.278	ENSPMEG00000006653	-	100	85.556	Poecilia_mexicana
ENSGALG00000004394	-	97	86.494	ENSPMEG00000021239	pcbp3	93	87.644	Poecilia_mexicana
ENSGALG00000004394	-	98	89.130	ENSPREG00000015736	pcbp3	97	80.523	Poecilia_reticulata
ENSGALG00000004394	-	96	92.737	ENSPREG00000020585	-	91	92.737	Poecilia_reticulata
ENSGALG00000004394	-	98	88.587	ENSPNYG00000012326	pcbp3	93	81.792	Pundamilia_nyererei
ENSGALG00000004394	-	98	88.587	ENSPNYG00000013205	-	98	83.099	Pundamilia_nyererei
ENSGALG00000004394	-	98	88.587	ENSPNAG00000008541	-	93	87.608	Pygocentrus_nattereri
ENSGALG00000004394	-	98	89.674	ENSPNAG00000015104	pcbp3	99	83.380	Pygocentrus_nattereri
ENSGALG00000004394	-	50	62.162	ENSPNAG00000006838	zgc:110045	90	62.162	Pygocentrus_nattereri
ENSGALG00000004394	-	99	91.892	ENSRNOG00000001245	Pcbp3	100	84.807	Rattus_norvegicus
ENSGALG00000004394	-	100	88.472	ENSRBIG00000028177	-	100	88.472	Rhinopithecus_bieti
ENSGALG00000004394	-	99	92.432	ENSSHAG00000007890	-	100	90.859	Sarcophilus_harrisii
ENSGALG00000004394	-	96	88.439	ENSSFOG00015014706	pcbp3	93	88.439	Scleropages_formosus
ENSGALG00000004394	-	98	90.217	ENSSFOG00015010205	pcbp3	98	89.855	Scleropages_formosus
ENSGALG00000004394	-	98	84.239	ENSSFOG00015007118	-	97	74.930	Scleropages_formosus
ENSGALG00000004394	-	98	89.130	ENSSMAG00000011929	pcbp3	95	82.267	Scophthalmus_maximus
ENSGALG00000004394	-	98	89.674	ENSSMAG00000003135	-	98	83.944	Scophthalmus_maximus
ENSGALG00000004394	-	96	84.012	ENSSDUG00000008502	-	93	84.012	Seriola_dumerili
ENSGALG00000004394	-	96	88.921	ENSSDUG00000011608	pcbp3	97	88.921	Seriola_dumerili
ENSGALG00000004394	-	98	89.674	ENSSLDG00000020161	-	93	82.997	Seriola_lalandi_dorsalis
ENSGALG00000004394	-	96	88.921	ENSSLDG00000008518	pcbp3	97	88.921	Seriola_lalandi_dorsalis
ENSGALG00000004394	-	87	90.123	ENSSPUG00000013214	-	94	82.791	Sphenodon_punctatus
ENSGALG00000004394	-	96	79.251	ENSSPAG00000023341	-	93	77.971	Stegastes_partitus
ENSGALG00000004394	-	98	89.674	ENSSPAG00000004190	-	100	85.449	Stegastes_partitus
ENSGALG00000004394	-	96	92.778	ENSTGUG00000003316	-	100	87.738	Taeniopygia_guttata
ENSGALG00000004394	-	98	86.957	ENSTGUG00000008158	-	100	78.670	Taeniopygia_guttata
ENSGALG00000004394	-	98	83.756	ENSTRUG00000013604	pcbp3	96	86.239	Takifugu_rubripes
ENSGALG00000004394	-	98	89.674	ENSTRUG00000006280	-	100	78.947	Takifugu_rubripes
ENSGALG00000004394	-	100	95.014	ENSTTRG00000015075	-	100	95.014	Tursiops_truncatus
ENSGALG00000004394	-	91	82.383	ENSXETG00000010491	pcbp2	74	75.843	Xenopus_tropicalis
ENSGALG00000004394	-	98	91.304	ENSXETG00000011483	pcbp1	100	84.530	Xenopus_tropicalis
ENSGALG00000004394	-	95	87.644	ENSXCOG00000020481	pcbp3	93	87.644	Xiphophorus_couchianus
ENSGALG00000004394	-	96	88.184	ENSXMAG00000008175	pcbp3	93	88.184	Xiphophorus_maculatus
ENSGALG00000004394	-	98	89.674	ENSXMAG00000028711	-	98	85.876	Xiphophorus_maculatus