EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000004555 (Gene tree)
Gene ID: 416270
Gene Symbol: RBM22
Alias: -
Full Name: RNA binding motif protein 22
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 7904 bases
Position: chr13:13782576-13790479
Accession: 25503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000058710	RRM_1	PF00076.22	4.5e-11	1	1
ENSGALP00000071991	RRM_1	PF00076.22	4.6e-11	1	1
ENSGALP00000007237	RRM_1	PF00076.22	4.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000091035	RBM22-203	1179	-	ENSGALP00000071991	392 (aa)	-	-
ENSGALT00000007249	RBM22-201	2405	-	ENSGALP00000007237	420 (aa)	-	F1NMD7
ENSGALT00000083615	RBM22-202	1209	-	ENSGALP00000058710	402 (aa)	-	A0A1L1RIY7

Gene Model

Click here to download ENSGALG00000004555's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000004555's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000004555	RBM22	100	97.381	ENSG00000086589	RBM22	100	97.381	Homo_sapiens
ENSGALG00000004555	RBM22	99	85.714	ENSAPOG00000010338	rbm22	99	86.321	Acanthochromis_polyacanthus
ENSGALG00000004555	RBM22	100	97.381	ENSAMEG00000004544	RBM22	100	97.381	Ailuropoda_melanoleuca
ENSGALG00000004555	RBM22	99	81.384	ENSACIG00000016372	rbm22	99	81.862	Amphilophus_citrinellus
ENSGALG00000004555	RBM22	99	85.714	ENSAOCG00000007179	rbm22	99	86.321	Amphiprion_ocellaris
ENSGALG00000004555	RBM22	99	85.377	ENSAPEG00000016689	rbm22	99	86.321	Amphiprion_percula
ENSGALG00000004555	RBM22	99	85.377	ENSATEG00000008286	rbm22	99	85.849	Anabas_testudineus
ENSGALG00000004555	RBM22	99	98.072	ENSAPLG00000016408	RBM22	99	98.072	Anas_platyrhynchos
ENSGALG00000004555	RBM22	100	97.625	ENSACAG00000014750	RBM22	100	97.625	Anolis_carolinensis
ENSGALG00000004555	RBM22	100	97.143	ENSANAG00000033743	-	100	97.143	Aotus_nancymaae
ENSGALG00000004555	RBM22	96	89.655	ENSANAG00000019688	-	100	90.130	Aotus_nancymaae
ENSGALG00000004555	RBM22	99	85.986	ENSACLG00000008863	rbm22	98	86.461	Astatotilapia_calliptera
ENSGALG00000004555	RBM22	99	83.732	ENSAMXG00000018529	-	99	84.450	Astyanax_mexicanus
ENSGALG00000004555	RBM22	99	86.052	ENSAMXG00000038080	rbm22	99	85.063	Astyanax_mexicanus
ENSGALG00000004555	RBM22	100	97.381	ENSBTAG00000030366	RBM22	100	97.381	Bos_taurus
ENSGALG00000004555	RBM22	98	50.597	WBGene00011722	rbm-22	82	58.209	Caenorhabditis_elegans
ENSGALG00000004555	RBM22	100	97.143	ENSCJAG00000020963	RBM22	100	97.143	Callithrix_jacchus
ENSGALG00000004555	RBM22	87	95.068	ENSCJAG00000013247	-	85	95.068	Callithrix_jacchus
ENSGALG00000004555	RBM22	100	96.919	ENSCAFG00000018082	RBM22	100	96.919	Canis_familiaris
ENSGALG00000004555	RBM22	100	97.381	ENSCAFG00020023671	RBM22	100	97.381	Canis_lupus_dingo
ENSGALG00000004555	RBM22	100	97.381	ENSCHIG00000015561	RBM22	100	97.381	Capra_hircus
ENSGALG00000004555	RBM22	94	84.865	ENSTSYG00000037586	-	100	84.865	Carlito_syrichta
ENSGALG00000004555	RBM22	100	97.381	ENSTSYG00000003939	-	100	97.381	Carlito_syrichta
ENSGALG00000004555	RBM22	96	95.325	ENSCAPG00000002598	RBM22	96	94.344	Cavia_aperea
ENSGALG00000004555	RBM22	100	97.381	ENSCPOG00000001946	RBM22	100	97.381	Cavia_porcellus
ENSGALG00000004555	RBM22	100	97.143	ENSCCAG00000033546	RBM22	100	97.143	Cebus_capucinus
ENSGALG00000004555	RBM22	100	97.381	ENSCATG00000042133	RBM22	100	97.381	Cercocebus_atys
ENSGALG00000004555	RBM22	100	73.474	ENSCLAG00000014221	-	94	73.474	Chinchilla_lanigera
ENSGALG00000004555	RBM22	100	97.381	ENSCLAG00000010842	-	100	97.381	Chinchilla_lanigera
ENSGALG00000004555	RBM22	100	77.857	ENSCLAG00000007106	-	100	77.381	Chinchilla_lanigera
ENSGALG00000004555	RBM22	94	97.208	ENSCSAG00000019006	-	100	97.208	Chlorocebus_sabaeus
ENSGALG00000004555	RBM22	100	95.952	ENSCHOG00000013522	-	100	95.952	Choloepus_hoffmanni
ENSGALG00000004555	RBM22	100	96.905	ENSCHOG00000001041	-	100	96.905	Choloepus_hoffmanni
ENSGALG00000004555	RBM22	74	96.970	ENSCHOG00000004192	-	100	96.970	Choloepus_hoffmanni
ENSGALG00000004555	RBM22	100	97.619	ENSCPBG00000010094	RBM22	100	97.619	Chrysemys_picta_bellii
ENSGALG00000004555	RBM22	98	64.269	ENSCING00000005843	zf(c3h)-12	99	62.085	Ciona_intestinalis
ENSGALG00000004555	RBM22	98	63.981	ENSCSAVG00000009145	-	99	63.270	Ciona_savignyi
ENSGALG00000004555	RBM22	100	97.381	ENSCANG00000025232	RBM22	100	97.381	Colobus_angolensis_palliatus
ENSGALG00000004555	RBM22	100	97.381	ENSCGRG00001015110	Rbm22	100	97.381	Cricetulus_griseus_chok1gshd
ENSGALG00000004555	RBM22	99	91.847	ENSCGRG00000011751	Rbm22	99	91.607	Cricetulus_griseus_crigri
ENSGALG00000004555	RBM22	99	84.670	ENSCSEG00000010790	rbm22	99	84.906	Cynoglossus_semilaevis
ENSGALG00000004555	RBM22	100	83.803	ENSCVAG00000010670	rbm22	99	84.038	Cyprinodon_variegatus
ENSGALG00000004555	RBM22	100	84.977	ENSDARG00000010238	rbm22	100	85.211	Danio_rerio
ENSGALG00000004555	RBM22	100	97.381	ENSDNOG00000011166	RBM22	100	97.381	Dasypus_novemcinctus
ENSGALG00000004555	RBM22	100	76.429	ENSDORG00000005329	Rbm22	100	76.429	Dipodomys_ordii
ENSGALG00000004555	RBM22	98	56.322	FBgn0037220	CG14641	74	65.484	Drosophila_melanogaster
ENSGALG00000004555	RBM22	91	89.362	ENSEBUG00000016742	-	99	89.362	Eptatretus_burgeri
ENSGALG00000004555	RBM22	100	97.381	ENSEASG00005002681	RBM22	100	97.381	Equus_asinus_asinus
ENSGALG00000004555	RBM22	100	88.147	ENSECAG00000014940	RBM22	100	88.147	Equus_caballus
ENSGALG00000004555	RBM22	100	79.762	ENSEEUG00000009778	-	100	79.762	Erinaceus_europaeus
ENSGALG00000004555	RBM22	100	95.476	ENSEEUG00000005638	-	100	95.476	Erinaceus_europaeus
ENSGALG00000004555	RBM22	99	83.412	ENSELUG00000001106	rbm22	96	84.634	Esox_lucius
ENSGALG00000004555	RBM22	100	97.381	ENSFCAG00000018845	RBM22	100	97.381	Felis_catus
ENSGALG00000004555	RBM22	100	99.524	ENSFALG00000008051	RBM22	100	99.524	Ficedula_albicollis
ENSGALG00000004555	RBM22	100	97.381	ENSFDAG00000020067	RBM22	100	97.381	Fukomys_damarensis
ENSGALG00000004555	RBM22	99	85.511	ENSFHEG00000014032	rbm22	98	85.986	Fundulus_heteroclitus
ENSGALG00000004555	RBM22	99	83.412	ENSGMOG00000010186	rbm22	100	85.071	Gadus_morhua
ENSGALG00000004555	RBM22	99	84.906	ENSGAFG00000008621	rbm22	99	85.377	Gambusia_affinis
ENSGALG00000004555	RBM22	99	84.038	ENSGACG00000018027	rbm22	99	85.211	Gasterosteus_aculeatus
ENSGALG00000004555	RBM22	100	97.857	ENSGAGG00000024305	RBM22	100	97.857	Gopherus_agassizii
ENSGALG00000004555	RBM22	100	97.381	ENSGGOG00000012947	RBM22	100	97.381	Gorilla_gorilla
ENSGALG00000004555	RBM22	99	85.986	ENSHBUG00000002941	rbm22	98	86.461	Haplochromis_burtoni
ENSGALG00000004555	RBM22	100	97.381	ENSHGLG00000008488	RBM22	100	97.381	Heterocephalus_glaber_female
ENSGALG00000004555	RBM22	98	97.573	ENSHGLG00100006872	RBM22	99	97.573	Heterocephalus_glaber_male
ENSGALG00000004555	RBM22	87	87.088	ENSHCOG00000016334	rbm22	92	87.123	Hippocampus_comes
ENSGALG00000004555	RBM22	99	82.742	ENSIPUG00000019751	rbm22	99	85.816	Ictalurus_punctatus
ENSGALG00000004555	RBM22	99	80.247	ENSSTOG00000029346	-	98	80.247	Ictidomys_tridecemlineatus
ENSGALG00000004555	RBM22	100	82.619	ENSSTOG00000027197	RBM22	100	82.619	Ictidomys_tridecemlineatus
ENSGALG00000004555	RBM22	100	97.381	ENSJJAG00000009565	Rbm22	100	97.381	Jaculus_jaculus
ENSGALG00000004555	RBM22	99	85.613	ENSKMAG00000004354	rbm22	99	86.085	Kryptolebias_marmoratus
ENSGALG00000004555	RBM22	99	86.429	ENSLBEG00000027750	rbm22	88	86.667	Labrus_bergylta
ENSGALG00000004555	RBM22	99	90.071	ENSLOCG00000010989	rbm22	99	90.780	Lepisosteus_oculatus
ENSGALG00000004555	RBM22	100	97.381	ENSLAFG00000006638	RBM22	100	97.381	Loxodonta_africana
ENSGALG00000004555	RBM22	100	97.381	ENSMFAG00000004034	RBM22	100	97.381	Macaca_fascicularis
ENSGALG00000004555	RBM22	100	97.381	ENSMMUG00000020683	RBM22	100	97.381	Macaca_mulatta
ENSGALG00000004555	RBM22	100	97.381	ENSMNEG00000035500	RBM22	100	97.381	Macaca_nemestrina
ENSGALG00000004555	RBM22	100	97.381	ENSMLEG00000034825	RBM22	100	97.381	Mandrillus_leucophaeus
ENSGALG00000004555	RBM22	99	86.321	ENSMAMG00000007370	rbm22	99	86.792	Mastacembelus_armatus
ENSGALG00000004555	RBM22	99	85.986	ENSMZEG00005013001	rbm22	98	86.461	Maylandia_zebra
ENSGALG00000004555	RBM22	100	100.000	ENSMGAG00000006298	RBM22	100	100.000	Meleagris_gallopavo
ENSGALG00000004555	RBM22	100	97.381	ENSMAUG00000001133	Rbm22	100	97.381	Mesocricetus_auratus
ENSGALG00000004555	RBM22	100	97.381	ENSMICG00000033712	RBM22	100	97.381	Microcebus_murinus
ENSGALG00000004555	RBM22	100	90.952	ENSMOCG00000018311	Rbm22	100	90.952	Microtus_ochrogaster
ENSGALG00000004555	RBM22	99	84.323	ENSMMOG00000003192	rbm22	98	84.798	Mola_mola
ENSGALG00000004555	RBM22	100	96.905	ENSMODG00000009574	-	100	96.905	Monodelphis_domestica
ENSGALG00000004555	RBM22	99	88.599	ENSMODG00000006398	-	99	88.599	Monodelphis_domestica
ENSGALG00000004555	RBM22	99	85.377	ENSMALG00000013964	rbm22	99	85.849	Monopterus_albus
ENSGALG00000004555	RBM22	100	97.381	MGP_CAROLIEiJ_G0022307	Rbm22	100	97.381	Mus_caroli
ENSGALG00000004555	RBM22	100	97.381	ENSMUSG00000024604	Rbm22	100	97.381	Mus_musculus
ENSGALG00000004555	RBM22	100	97.381	MGP_PahariEiJ_G0019037	Rbm22	100	97.381	Mus_pahari
ENSGALG00000004555	RBM22	100	97.381	MGP_SPRETEiJ_G0023219	Rbm22	100	97.381	Mus_spretus
ENSGALG00000004555	RBM22	100	97.381	ENSMPUG00000013760	RBM22	100	97.381	Mustela_putorius_furo
ENSGALG00000004555	RBM22	100	97.381	ENSMLUG00000009040	RBM22	100	97.381	Myotis_lucifugus
ENSGALG00000004555	RBM22	100	93.095	ENSMLUG00000003461	-	100	93.571	Myotis_lucifugus
ENSGALG00000004555	RBM22	100	97.381	ENSNGAG00000018233	Rbm22	100	97.381	Nannospalax_galili
ENSGALG00000004555	RBM22	94	84.800	ENSNBRG00000010458	rbm22	95	89.049	Neolamprologus_brichardi
ENSGALG00000004555	RBM22	100	97.381	ENSNLEG00000010397	-	100	97.381	Nomascus_leucogenys
ENSGALG00000004555	RBM22	100	83.571	ENSMEUG00000009348	-	100	83.571	Notamacropus_eugenii
ENSGALG00000004555	RBM22	82	97.619	ENSMEUG00000001573	-	81	97.436	Notamacropus_eugenii
ENSGALG00000004555	RBM22	100	74.048	ENSOPRG00000016612	-	100	73.095	Ochotona_princeps
ENSGALG00000004555	RBM22	100	97.619	ENSOPRG00000008481	-	100	97.619	Ochotona_princeps
ENSGALG00000004555	RBM22	100	96.429	ENSODEG00000005016	RBM22	100	96.429	Octodon_degus
ENSGALG00000004555	RBM22	99	85.545	ENSONIG00000013049	rbm22	99	84.834	Oreochromis_niloticus
ENSGALG00000004555	RBM22	100	95.981	ENSOANG00000002314	RBM22	100	95.981	Ornithorhynchus_anatinus
ENSGALG00000004555	RBM22	100	97.381	ENSOCUG00000011532	RBM22	100	97.381	Oryctolagus_cuniculus
ENSGALG00000004555	RBM22	99	84.706	ENSORLG00000004975	rbm22	99	84.941	Oryzias_latipes
ENSGALG00000004555	RBM22	99	84.706	ENSORLG00020012969	rbm22	99	84.941	Oryzias_latipes_hni
ENSGALG00000004555	RBM22	99	84.706	ENSORLG00015022508	rbm22	99	84.941	Oryzias_latipes_hsok
ENSGALG00000004555	RBM22	99	84.941	ENSOMEG00000004904	rbm22	99	84.706	Oryzias_melastigma
ENSGALG00000004555	RBM22	100	92.162	ENSOGAG00000011086	RBM22	100	92.180	Otolemur_garnettii
ENSGALG00000004555	RBM22	100	95.024	ENSOARG00000007633	RBM22	100	95.024	Ovis_aries
ENSGALG00000004555	RBM22	100	97.381	ENSPPAG00000034432	RBM22	100	97.381	Pan_paniscus
ENSGALG00000004555	RBM22	100	97.381	ENSPPRG00000011577	RBM22	100	97.381	Panthera_pardus
ENSGALG00000004555	RBM22	100	97.381	ENSPTIG00000004453	RBM22	100	97.381	Panthera_tigris_altaica
ENSGALG00000004555	RBM22	100	97.381	ENSPTRG00000017423	RBM22	100	97.381	Pan_troglodytes
ENSGALG00000004555	RBM22	100	97.381	ENSPANG00000011297	RBM22	100	97.381	Papio_anubis
ENSGALG00000004555	RBM22	99	86.052	ENSPKIG00000010315	rbm22	99	86.761	Paramormyrops_kingsleyae
ENSGALG00000004555	RBM22	93	85.714	ENSPKIG00000019326	rbm22	83	87.397	Paramormyrops_kingsleyae
ENSGALG00000004555	RBM22	100	97.381	ENSPSIG00000012818	RBM22	100	97.381	Pelodiscus_sinensis
ENSGALG00000004555	RBM22	99	80.383	ENSPMGG00000017638	rbm22	100	83.095	Periophthalmus_magnuspinnatus
ENSGALG00000004555	RBM22	100	97.143	ENSPEMG00000001753	Rbm22	100	97.143	Peromyscus_maniculatus_bairdii
ENSGALG00000004555	RBM22	83	70.118	ENSPMAG00000007317	-	99	73.669	Petromyzon_marinus
ENSGALG00000004555	RBM22	100	84.048	ENSPCIG00000015088	RBM22	100	84.048	Phascolarctos_cinereus
ENSGALG00000004555	RBM22	99	84.670	ENSPFOG00000005625	rbm22	99	84.906	Poecilia_formosa
ENSGALG00000004555	RBM22	99	84.198	ENSPLAG00000006344	rbm22	99	84.198	Poecilia_latipinna
ENSGALG00000004555	RBM22	99	84.236	ENSPMEG00000007992	rbm22	99	84.483	Poecilia_mexicana
ENSGALG00000004555	RBM22	99	84.906	ENSPREG00000003546	rbm22	99	85.377	Poecilia_reticulata
ENSGALG00000004555	RBM22	100	97.381	ENSPPYG00000015955	RBM22	100	97.381	Pongo_abelii
ENSGALG00000004555	RBM22	90	82.759	ENSPCAG00000015091	RBM22	100	82.759	Procavia_capensis
ENSGALG00000004555	RBM22	100	97.381	ENSPVAG00000014231	RBM22	100	97.381	Pteropus_vampyrus
ENSGALG00000004555	RBM22	86	88.761	ENSPNYG00000000380	rbm22	95	88.761	Pundamilia_nyererei
ENSGALG00000004555	RBM22	99	85.343	ENSPNAG00000002687	rbm22	99	85.142	Pygocentrus_nattereri
ENSGALG00000004555	RBM22	99	87.081	ENSPNAG00000010001	-	99	87.560	Pygocentrus_nattereri
ENSGALG00000004555	RBM22	100	96.905	ENSRNOG00000019235	Rbm22	100	96.905	Rattus_norvegicus
ENSGALG00000004555	RBM22	100	97.381	ENSRBIG00000041683	RBM22	100	97.381	Rhinopithecus_bieti
ENSGALG00000004555	RBM22	100	97.381	ENSRROG00000041637	RBM22	100	97.381	Rhinopithecus_roxellana
ENSGALG00000004555	RBM22	100	96.905	ENSSBOG00000035400	-	100	96.905	Saimiri_boliviensis_boliviensis
ENSGALG00000004555	RBM22	100	96.667	ENSSHAG00000017734	-	100	96.667	Sarcophilus_harrisii
ENSGALG00000004555	RBM22	99	84.360	ENSSFOG00015022259	rbm22	99	84.597	Scleropages_formosus
ENSGALG00000004555	RBM22	99	85.816	ENSSFOG00015014955	rbm22	99	87.470	Scleropages_formosus
ENSGALG00000004555	RBM22	99	86.321	ENSSMAG00000002921	rbm22	99	86.792	Scophthalmus_maximus
ENSGALG00000004555	RBM22	99	86.085	ENSSDUG00000003846	rbm22	99	86.557	Seriola_dumerili
ENSGALG00000004555	RBM22	99	86.085	ENSSLDG00000003804	rbm22	99	86.557	Seriola_lalandi_dorsalis
ENSGALG00000004555	RBM22	54	100.000	ENSSARG00000003205	-	56	100.000	Sorex_araneus
ENSGALG00000004555	RBM22	100	97.387	ENSSPUG00000003986	RBM22	100	97.387	Sphenodon_punctatus
ENSGALG00000004555	RBM22	99	86.085	ENSSPAG00000000383	rbm22	99	86.321	Stegastes_partitus
ENSGALG00000004555	RBM22	100	96.667	ENSSSCG00000023231	RBM22	100	96.667	Sus_scrofa
ENSGALG00000004555	RBM22	100	99.524	ENSTGUG00000000850	RBM22	100	99.524	Taeniopygia_guttata
ENSGALG00000004555	RBM22	99	84.000	ENSTRUG00000004724	rbm22	99	83.765	Takifugu_rubripes
ENSGALG00000004555	RBM22	100	84.524	ENSTBEG00000005617	RBM22	100	84.524	Tupaia_belangeri
ENSGALG00000004555	RBM22	100	97.381	ENSTTRG00000012778	RBM22	100	97.381	Tursiops_truncatus
ENSGALG00000004555	RBM22	100	97.381	ENSUAMG00000025133	RBM22	100	97.381	Ursus_americanus
ENSGALG00000004555	RBM22	100	97.381	ENSUMAG00000003651	RBM22	100	97.381	Ursus_maritimus
ENSGALG00000004555	RBM22	100	97.381	ENSVVUG00000007193	RBM22	100	97.381	Vulpes_vulpes
ENSGALG00000004555	RBM22	99	87.589	ENSXETG00000020435	rbm22	99	88.544	Xenopus_tropicalis
ENSGALG00000004555	RBM22	99	81.235	ENSXCOG00000003316	rbm22	98	81.710	Xiphophorus_couchianus
ENSGALG00000004555	RBM22	99	85.511	ENSXMAG00000008681	rbm22	98	85.986	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000387	spliceosomal snRNP assembly	21873635.	IBA	Process
GO:0000974	Prp19 complex	21873635.	IBA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0017070	U6 snRNA binding	21873635.	IBA	Function
GO:0017070	U6 snRNA binding	-	ISS	Function
GO:0033120	positive regulation of RNA splicing	-	ISS	Process
GO:0035690	cellular response to drug	-	ISS	Process
GO:0036002	pre-mRNA binding	21873635.	IBA	Function
GO:0036002	pre-mRNA binding	-	ISS	Function
GO:0045292	mRNA cis splicing, via spliceosome	-	ISS	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0071006	U2-type catalytic step 1 spliceosome	21873635.	IBA	Component
GO:0071007	U2-type catalytic step 2 spliceosome	21873635.	IBA	Component